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The map label for this gene is petM

Identifier: 86608337

GI number: 86608337

Start: 889659

End: 889766

Strand: Direct

Name: petM

Synonym: CYB_0855

Alternate gene names: 86608337

Gene position: 889659-889766 (Clockwise)

Preceding gene: 86608333

Following gene: 86608338

Centisome position: 29.2

GC content: 59.26

Gene sequence:

>108_bases
ATGGCTGGCGAGATCTTCACCACTGCTGGACTCTGCATTGTGCTGACCCTGGTGGGCGTGGCACTTGGATATGGGATCCT
GAGGGTGACCCAAGGGGGGGCAGAGTAA

Upstream 100 bases:

>100_bases
GAGTTGGGTTTGGGCCGCTACACCCTTGGAGTGAAGGCCAGGGCTTGGGATCCGATATCCTGAGAAGGCGATGTATCCCA
TTTGCGAGGAAGCTGAATCT

Downstream 100 bases:

>100_bases
AGCTGTCGAGGATTTCTCCCGGGCCCGGTATCGGGCCTTGTTACAGCTCCATGTCAATTCCATGTCAATTGGCCACCTGG
ATATGAGGTGGGTGGCGGAA

Product: cytochrome b6-f complex subunit PetM

Products: NA

Alternate protein names: Cytochrome b6-f complex subunit VII; Cytochrome b6-f complex subunit petM

Number of amino acids: Translated: 35; Mature: 34

Protein sequence:

>35_residues
MAGEIFTTAGLCIVLTLVGVALGYGILRVTQGGAE

Sequences:

>Translated_35_residues
MAGEIFTTAGLCIVLTLVGVALGYGILRVTQGGAE
>Mature_34_residues
AGEIFTTAGLCIVLTLVGVALGYGILRVTQGGAE

Specific function: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the petM family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PETM_SYNJB (Q2JN39)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_477099.1
- GeneID:   3902296
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_0855
- TIGR:   CYB_0855
- ProtClustDB:   PRK11876
- BioCyc:   SSP321332:CYB_0855-MONOMER
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_00396
- InterPro:   IPR012595

Pfam domain/function: PF08041 PetM

EC number: NA

Molecular weight: Translated: 3495; Mature: 3364

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12d20cac)-;

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGEIFTTAGLCIVLTLVGVALGYGILRVTQGGAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure 
AGEIFTTAGLCIVLTLVGVALGYGILRVTQGGAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA