Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is yeaC [H]

Identifier: 86608331

GI number: 86608331

Start: 882043

End: 883038

Strand: Direct

Name: yeaC [H]

Synonym: CYB_0849

Alternate gene names: 86608331

Gene position: 882043-883038 (Clockwise)

Preceding gene: 86608327

Following gene: 86608333

Centisome position: 28.95

GC content: 58.03

Gene sequence:

>996_bases
ATGGCGAGTGTCAGCACCCGGTCTGGTTCAGCACGGATCCCAGCGGAGCGATTACAAACCTTGCACCAACAGATTGGCAA
GCTGATTGCCAATATCGAATCCGTGTTTCAGGGCAAATCGCAGGTGGTGCAGGCGGTGGTCACGGCCTTGGTTGCGGAAG
GTCATGTTTTGCTTGAAGATGTGCCCGGTGTAGGCAAGACCACTTTGGCGCGGGCTATTGCCCAGAGTTTGGGGGCCAAG
TTTCAGCGGATTCAATTTACCAGCGACCTATTGCCGACAGATATCCTTGGCCTCACCCTTTTCAACAAAGAAAAAGGGGA
TTTTGAATTTCGTCCCGGCCCCATTTTTGCCCACGTGGTCTTGGCGGATGAAATCAACCGCACCTCGCCCCGCACCCAGA
GTGCTCTGCTCGAGGCAATGGCGGAAAAGCAGGTTTCGCTGGACGATCGCACCTACCCGCTGCCCAGCCCATTTATGGTG
TTGGCCACCCAAAATCCTTTGGAGTACCACGGCACCTATCCCCTCCCAGAAAGCCAGTTGGATCGGTTTTTGGTACGGCT
GTCGATTGGCTACCCCAGCCCTGAGGTAGAGCGAGCTTTACTCTTGCAACGGCAACAGGCCGAGCCGGTGGATGCTCTGC
AGCCGGTTCTCTCCCTGATGGAGTTGCGAGAGATTCAGTCGGCGGTGGATCAGGTGTATTTGGATGGATCCCTGGCGGAC
TATCTTCTGCAGGTGGTGCAGGCCACCCGCGTGTCCAAGCTGCTGCGGGCGGGGGTATCCACCCGTGGAGCCCTGGCCTT
GGCGCGGGCAGCACGGGCTCAGGCGCTGGTGAAAGGGCGCAGCTTTTGTCTACCAGAAGATCTGCAAGCACTGTTCGTGC
CGGTACTGACCCATCGGGTTTCTCTGGCCGGGTCGGGAGAGATGGCCGGCAACCGACGGCAAGAGGCTGAGGCGGTGATT
CGGGATATTGTCTCCACAATTGAGCCGCCTGTTTGA

Upstream 100 bases:

>100_bases
ATGATACTCCGGTTTTTTAGTGGGGTTTAGCGGGATCCCGCCCTGAGCTGGCAATGGGATCCAGCCTGTAAGGTGGAATA
GGCCCCTTTGGGAATGGTTT

Downstream 100 bases:

>100_bases
GGGATCCGTAGCAGCAATGGTTAACTACAGCAGTGAGTCGGGTCGGATCCGGGGATCCACCCACATCAGGAGCAAATCGG
CCAACAAATTGCCCAGAATG

Product: AAA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MASVSTRSGSARIPAERLQTLHQQIGKLIANIESVFQGKSQVVQAVVTALVAEGHVLLEDVPGVGKTTLARAIAQSLGAK
FQRIQFTSDLLPTDILGLTLFNKEKGDFEFRPGPIFAHVVLADEINRTSPRTQSALLEAMAEKQVSLDDRTYPLPSPFMV
LATQNPLEYHGTYPLPESQLDRFLVRLSIGYPSPEVERALLLQRQQAEPVDALQPVLSLMELREIQSAVDQVYLDGSLAD
YLLQVVQATRVSKLLRAGVSTRGALALARAARAQALVKGRSFCLPEDLQALFVPVLTHRVSLAGSGEMAGNRRQEAEAVI
RDIVSTIEPPV

Sequences:

>Translated_331_residues
MASVSTRSGSARIPAERLQTLHQQIGKLIANIESVFQGKSQVVQAVVTALVAEGHVLLEDVPGVGKTTLARAIAQSLGAK
FQRIQFTSDLLPTDILGLTLFNKEKGDFEFRPGPIFAHVVLADEINRTSPRTQSALLEAMAEKQVSLDDRTYPLPSPFMV
LATQNPLEYHGTYPLPESQLDRFLVRLSIGYPSPEVERALLLQRQQAEPVDALQPVLSLMELREIQSAVDQVYLDGSLAD
YLLQVVQATRVSKLLRAGVSTRGALALARAARAQALVKGRSFCLPEDLQALFVPVLTHRVSLAGSGEMAGNRRQEAEAVI
RDIVSTIEPPV
>Mature_330_residues
ASVSTRSGSARIPAERLQTLHQQIGKLIANIESVFQGKSQVVQAVVTALVAEGHVLLEDVPGVGKTTLARAIAQSLGAKF
QRIQFTSDLLPTDILGLTLFNKEKGDFEFRPGPIFAHVVLADEINRTSPRTQSALLEAMAEKQVSLDDRTYPLPSPFMVL
ATQNPLEYHGTYPLPESQLDRFLVRLSIGYPSPEVERALLLQRQQAEPVDALQPVLSLMELREIQSAVDQVYLDGSLADY
LLQVVQATRVSKLLRAGVSTRGALALARAARAQALVKGRSFCLPEDLQALFVPVLTHRVSLAGSGEMAGNRRQEAEAVIR
DIVSTIEPPV

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the moxR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011703
- InterPro:   IPR016366 [H]

Pfam domain/function: PF07726 AAA_3 [H]

EC number: NA

Molecular weight: Translated: 36075; Mature: 35944

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVSTRSGSARIPAERLQTLHQQIGKLIANIESVFQGKSQVVQAVVTALVAEGHVLLED
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEC
VPGVGKTTLARAIAQSLGAKFQRIQFTSDLLPTDILGLTLFNKEKGDFEFRPGPIFAHVV
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCCCEEEEEE
LADEINRTSPRTQSALLEAMAEKQVSLDDRTYPLPSPFMVLATQNPLEYHGTYPLPESQL
EHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCHHHH
DRFLVRLSIGYPSPEVERALLLQRQQAEPVDALQPVLSLMELREIQSAVDQVYLDGSLAD
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
YLLQVVQATRVSKLLRAGVSTRGALALARAARAQALVKGRSFCLPEDLQALFVPVLTHRV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SLAGSGEMAGNRRQEAEAVIRDIVSTIEPPV
HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASVSTRSGSARIPAERLQTLHQQIGKLIANIESVFQGKSQVVQAVVTALVAEGHVLLED
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEC
VPGVGKTTLARAIAQSLGAKFQRIQFTSDLLPTDILGLTLFNKEKGDFEFRPGPIFAHVV
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCCCEEEEEE
LADEINRTSPRTQSALLEAMAEKQVSLDDRTYPLPSPFMVLATQNPLEYHGTYPLPESQL
EHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCHHHH
DRFLVRLSIGYPSPEVERALLLQRQQAEPVDALQPVLSLMELREIQSAVDQVYLDGSLAD
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
YLLQVVQATRVSKLLRAGVSTRGALALARAARAQALVKGRSFCLPEDLQALFVPVLTHRV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SLAGSGEMAGNRRQEAEAVIRDIVSTIEPPV
HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]