Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is yeaC [H]
Identifier: 86608331
GI number: 86608331
Start: 882043
End: 883038
Strand: Direct
Name: yeaC [H]
Synonym: CYB_0849
Alternate gene names: 86608331
Gene position: 882043-883038 (Clockwise)
Preceding gene: 86608327
Following gene: 86608333
Centisome position: 28.95
GC content: 58.03
Gene sequence:
>996_bases ATGGCGAGTGTCAGCACCCGGTCTGGTTCAGCACGGATCCCAGCGGAGCGATTACAAACCTTGCACCAACAGATTGGCAA GCTGATTGCCAATATCGAATCCGTGTTTCAGGGCAAATCGCAGGTGGTGCAGGCGGTGGTCACGGCCTTGGTTGCGGAAG GTCATGTTTTGCTTGAAGATGTGCCCGGTGTAGGCAAGACCACTTTGGCGCGGGCTATTGCCCAGAGTTTGGGGGCCAAG TTTCAGCGGATTCAATTTACCAGCGACCTATTGCCGACAGATATCCTTGGCCTCACCCTTTTCAACAAAGAAAAAGGGGA TTTTGAATTTCGTCCCGGCCCCATTTTTGCCCACGTGGTCTTGGCGGATGAAATCAACCGCACCTCGCCCCGCACCCAGA GTGCTCTGCTCGAGGCAATGGCGGAAAAGCAGGTTTCGCTGGACGATCGCACCTACCCGCTGCCCAGCCCATTTATGGTG TTGGCCACCCAAAATCCTTTGGAGTACCACGGCACCTATCCCCTCCCAGAAAGCCAGTTGGATCGGTTTTTGGTACGGCT GTCGATTGGCTACCCCAGCCCTGAGGTAGAGCGAGCTTTACTCTTGCAACGGCAACAGGCCGAGCCGGTGGATGCTCTGC AGCCGGTTCTCTCCCTGATGGAGTTGCGAGAGATTCAGTCGGCGGTGGATCAGGTGTATTTGGATGGATCCCTGGCGGAC TATCTTCTGCAGGTGGTGCAGGCCACCCGCGTGTCCAAGCTGCTGCGGGCGGGGGTATCCACCCGTGGAGCCCTGGCCTT GGCGCGGGCAGCACGGGCTCAGGCGCTGGTGAAAGGGCGCAGCTTTTGTCTACCAGAAGATCTGCAAGCACTGTTCGTGC CGGTACTGACCCATCGGGTTTCTCTGGCCGGGTCGGGAGAGATGGCCGGCAACCGACGGCAAGAGGCTGAGGCGGTGATT CGGGATATTGTCTCCACAATTGAGCCGCCTGTTTGA
Upstream 100 bases:
>100_bases ATGATACTCCGGTTTTTTAGTGGGGTTTAGCGGGATCCCGCCCTGAGCTGGCAATGGGATCCAGCCTGTAAGGTGGAATA GGCCCCTTTGGGAATGGTTT
Downstream 100 bases:
>100_bases GGGATCCGTAGCAGCAATGGTTAACTACAGCAGTGAGTCGGGTCGGATCCGGGGATCCACCCACATCAGGAGCAAATCGG CCAACAAATTGCCCAGAATG
Product: AAA family ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MASVSTRSGSARIPAERLQTLHQQIGKLIANIESVFQGKSQVVQAVVTALVAEGHVLLEDVPGVGKTTLARAIAQSLGAK FQRIQFTSDLLPTDILGLTLFNKEKGDFEFRPGPIFAHVVLADEINRTSPRTQSALLEAMAEKQVSLDDRTYPLPSPFMV LATQNPLEYHGTYPLPESQLDRFLVRLSIGYPSPEVERALLLQRQQAEPVDALQPVLSLMELREIQSAVDQVYLDGSLAD YLLQVVQATRVSKLLRAGVSTRGALALARAARAQALVKGRSFCLPEDLQALFVPVLTHRVSLAGSGEMAGNRRQEAEAVI RDIVSTIEPPV
Sequences:
>Translated_331_residues MASVSTRSGSARIPAERLQTLHQQIGKLIANIESVFQGKSQVVQAVVTALVAEGHVLLEDVPGVGKTTLARAIAQSLGAK FQRIQFTSDLLPTDILGLTLFNKEKGDFEFRPGPIFAHVVLADEINRTSPRTQSALLEAMAEKQVSLDDRTYPLPSPFMV LATQNPLEYHGTYPLPESQLDRFLVRLSIGYPSPEVERALLLQRQQAEPVDALQPVLSLMELREIQSAVDQVYLDGSLAD YLLQVVQATRVSKLLRAGVSTRGALALARAARAQALVKGRSFCLPEDLQALFVPVLTHRVSLAGSGEMAGNRRQEAEAVI RDIVSTIEPPV >Mature_330_residues ASVSTRSGSARIPAERLQTLHQQIGKLIANIESVFQGKSQVVQAVVTALVAEGHVLLEDVPGVGKTTLARAIAQSLGAKF QRIQFTSDLLPTDILGLTLFNKEKGDFEFRPGPIFAHVVLADEINRTSPRTQSALLEAMAEKQVSLDDRTYPLPSPFMVL ATQNPLEYHGTYPLPESQLDRFLVRLSIGYPSPEVERALLLQRQQAEPVDALQPVLSLMELREIQSAVDQVYLDGSLADY LLQVVQATRVSKLLRAGVSTRGALALARAARAQALVKGRSFCLPEDLQALFVPVLTHRVSLAGSGEMAGNRRQEAEAVIR DIVSTIEPPV
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36075; Mature: 35944
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVSTRSGSARIPAERLQTLHQQIGKLIANIESVFQGKSQVVQAVVTALVAEGHVLLED CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEC VPGVGKTTLARAIAQSLGAKFQRIQFTSDLLPTDILGLTLFNKEKGDFEFRPGPIFAHVV CCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCCCEEEEEE LADEINRTSPRTQSALLEAMAEKQVSLDDRTYPLPSPFMVLATQNPLEYHGTYPLPESQL EHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCHHHH DRFLVRLSIGYPSPEVERALLLQRQQAEPVDALQPVLSLMELREIQSAVDQVYLDGSLAD HHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH YLLQVVQATRVSKLLRAGVSTRGALALARAARAQALVKGRSFCLPEDLQALFVPVLTHRV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH SLAGSGEMAGNRRQEAEAVIRDIVSTIEPPV HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ASVSTRSGSARIPAERLQTLHQQIGKLIANIESVFQGKSQVVQAVVTALVAEGHVLLED CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEC VPGVGKTTLARAIAQSLGAKFQRIQFTSDLLPTDILGLTLFNKEKGDFEFRPGPIFAHVV CCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCCCEEEEEE LADEINRTSPRTQSALLEAMAEKQVSLDDRTYPLPSPFMVLATQNPLEYHGTYPLPESQL EHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCHHHH DRFLVRLSIGYPSPEVERALLLQRQQAEPVDALQPVLSLMELREIQSAVDQVYLDGSLAD HHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH YLLQVVQATRVSKLLRAGVSTRGALALARAARAQALVKGRSFCLPEDLQALFVPVLTHRV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH SLAGSGEMAGNRRQEAEAVIRDIVSTIEPPV HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]