| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608313
Identifier: 86608313
GI number: 86608313
Start: 862696
End: 863940
Strand: Direct
Name: 86608313
Synonym: CYB_0831
Alternate gene names: NA
Gene position: 862696-863940 (Clockwise)
Preceding gene: 86608312
Following gene: 86608314
Centisome position: 28.32
GC content: 62.33
Gene sequence:
>1245_bases ATGGGTTTTTCTGAGTTTGAGGATCAAGATCCCATTGCAGCAGCGGAACGGACTGCTGCCCCCGATCCCAGCCGCCATTC CCCGGATTCTGCCGGTGAGGAAGCCGCGATCTCCTCGGTTGCAAACTCTGGTGAAGGAAGGGAGCGGCAAGGTCGTCGTT CTCCACCCCCTTTGCCGGAAGAGGGCTCAACCTTTGCAGGCGCAGAAGATTGGCTGGACGTTCGCGGTAGCGGGACGGAG TCCTTGGAGAATGGGCGGGATAGCTACAGGGAGTCCGCGCAAGGGGCCACTTCTCGCCCTTCCAACCGCTCCCCCCAGAC TGGCCGAGACGAGGGGTCTCGTGTTGACAGCGAAAAGGGGGGGCAGAAAGCCGCTGCAGGAGGAGCTGGTGAGCGCCCTG GGCAAGCGCTAGTTCCCCGCCGTTCTGTCTCCAGCAACCGCAGCTACGACGGATCCGCCCGTTCCTCTGCCTTTCGCGGT AGCGGGACGGAGTCCTTTGCTGGCCGCTCGCGTAAGCGGGACGGAGTCCTTGGGGAATCCGGCTACCGCAGTGACTACAG CCGTTCCGCTCCTTATGGCTACACCTCCAGCTATGTTGGCGGTGGGGGATATGGCGGTGGTGGGCGAGGCGGCAGCTCCA GCGGGGGGGTCTCCTCCTCCGATCTGACGATCCTGCTGGTGGTGGCCCTGCTGGCCTTCTTCGGGGGATTCGCTATCCGC AACATCTTCGCCGAGTCGGGCGGCTTTGACGATGAGCGCCCCATCCGCGCTGCCAATGTGCCCGCAGCCTTTCGCGATTT TTGCTTTGCCTATAACGGCACTGCCTCCTTTACTGTGGTGCAACTGACCAGCGTTTCTGCTCTGACCATGGCCTCAGTGC CCGTTTACAAGATGGATACTTGCACCATCCCCGTCAGCCAAACGGCCAATGCCCTCCAAGCTTTGGGCATCCGCGGCCGG GCCAACACCTTGGGCCCCCAGCTGGGGGGATCCAACCTCACCCTGATCCAGCTCCCCTTGGCCAGCAGCTTGGCGCGCGC CGTGTACAGCCAGTTTCCTGGCTTGGCTACTCAGGGCAACGAGGCGCAGGTTTTGTCCCAACTGGAAGCCACCATCAACA ACGCCCTGCGCTCCAACATCGAAGGGTTAGCCCTGCAAAGCCTGGAGCCCACCAACATCCCCGACGTCTACGTGATGGTG CCGGGGCACTCCTTTAATTTGCAGCCCCAACTCAACCTGCGCTAA
Upstream 100 bases:
>100_bases CTGGCTGGGGAGCTGCTAGCATACAATAGTCCCTTCCCTTCGGGGGAGTGAAATTGAAAGCCGTCTTGCCTTGGCAGCTG AGGGGAGCGCTCGAAGAACT
Downstream 100 bases:
>100_bases CCCTCCTGCAGAGGACGACGGTGTGTTCATCACCCTAGAAGGCGGGGAAGGGGTGGGCAAAACCACCCAACAGGCCCTCT TGGTTGAGCGGCTGCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MGFSEFEDQDPIAAAERTAAPDPSRHSPDSAGEEAAISSVANSGEGRERQGRRSPPPLPEEGSTFAGAEDWLDVRGSGTE SLENGRDSYRESAQGATSRPSNRSPQTGRDEGSRVDSEKGGQKAAAGGAGERPGQALVPRRSVSSNRSYDGSARSSAFRG SGTESFAGRSRKRDGVLGESGYRSDYSRSAPYGYTSSYVGGGGYGGGGRGGSSSGGVSSSDLTILLVVALLAFFGGFAIR NIFAESGGFDDERPIRAANVPAAFRDFCFAYNGTASFTVVQLTSVSALTMASVPVYKMDTCTIPVSQTANALQALGIRGR ANTLGPQLGGSNLTLIQLPLASSLARAVYSQFPGLATQGNEAQVLSQLEATINNALRSNIEGLALQSLEPTNIPDVYVMV PGHSFNLQPQLNLR
Sequences:
>Translated_414_residues MGFSEFEDQDPIAAAERTAAPDPSRHSPDSAGEEAAISSVANSGEGRERQGRRSPPPLPEEGSTFAGAEDWLDVRGSGTE SLENGRDSYRESAQGATSRPSNRSPQTGRDEGSRVDSEKGGQKAAAGGAGERPGQALVPRRSVSSNRSYDGSARSSAFRG SGTESFAGRSRKRDGVLGESGYRSDYSRSAPYGYTSSYVGGGGYGGGGRGGSSSGGVSSSDLTILLVVALLAFFGGFAIR NIFAESGGFDDERPIRAANVPAAFRDFCFAYNGTASFTVVQLTSVSALTMASVPVYKMDTCTIPVSQTANALQALGIRGR ANTLGPQLGGSNLTLIQLPLASSLARAVYSQFPGLATQGNEAQVLSQLEATINNALRSNIEGLALQSLEPTNIPDVYVMV PGHSFNLQPQLNLR >Mature_413_residues GFSEFEDQDPIAAAERTAAPDPSRHSPDSAGEEAAISSVANSGEGRERQGRRSPPPLPEEGSTFAGAEDWLDVRGSGTES LENGRDSYRESAQGATSRPSNRSPQTGRDEGSRVDSEKGGQKAAAGGAGERPGQALVPRRSVSSNRSYDGSARSSAFRGS GTESFAGRSRKRDGVLGESGYRSDYSRSAPYGYTSSYVGGGGYGGGGRGGSSSGGVSSSDLTILLVVALLAFFGGFAIRN IFAESGGFDDERPIRAANVPAAFRDFCFAYNGTASFTVVQLTSVSALTMASVPVYKMDTCTIPVSQTANALQALGIRGRA NTLGPQLGGSNLTLIQLPLASSLARAVYSQFPGLATQGNEAQVLSQLEATINNALRSNIEGLALQSLEPTNIPDVYVMVP GHSFNLQPQLNLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43158; Mature: 43026
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSEFEDQDPIAAAERTAAPDPSRHSPDSAGEEAAISSVANSGEGRERQGRRSPPPLPE CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCC EGSTFAGAEDWLDVRGSGTESLENGRDSYRESAQGATSRPSNRSPQTGRDEGSRVDSEKG CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GQKAAAGGAGERPGQALVPRRSVSSNRSYDGSARSSAFRGSGTESFAGRSRKRDGVLGES CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCC GYRSDYSRSAPYGYTSSYVGGGGYGGGGRGGSSSGGVSSSDLTILLVVALLAFFGGFAIR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH NIFAESGGFDDERPIRAANVPAAFRDFCFAYNGTASFTVVQLTSVSALTMASVPVYKMDT HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCEEECCE CTIPVSQTANALQALGIRGRANTLGPQLGGSNLTLIQLPLASSLARAVYSQFPGLATQGN EEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCC EAQVLSQLEATINNALRSNIEGLALQSLEPTNIPDVYVMVPGHSFNLQPQLNLR HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure GFSEFEDQDPIAAAERTAAPDPSRHSPDSAGEEAAISSVANSGEGRERQGRRSPPPLPE CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCC EGSTFAGAEDWLDVRGSGTESLENGRDSYRESAQGATSRPSNRSPQTGRDEGSRVDSEKG CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GQKAAAGGAGERPGQALVPRRSVSSNRSYDGSARSSAFRGSGTESFAGRSRKRDGVLGES CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCC GYRSDYSRSAPYGYTSSYVGGGGYGGGGRGGSSSGGVSSSDLTILLVVALLAFFGGFAIR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH NIFAESGGFDDERPIRAANVPAAFRDFCFAYNGTASFTVVQLTSVSALTMASVPVYKMDT HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCEEECCE CTIPVSQTANALQALGIRGRANTLGPQLGGSNLTLIQLPLASSLARAVYSQFPGLATQGN EEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCC EAQVLSQLEATINNALRSNIEGLALQSLEPTNIPDVYVMVPGHSFNLQPQLNLR HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA