Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608313

Identifier: 86608313

GI number: 86608313

Start: 862696

End: 863940

Strand: Direct

Name: 86608313

Synonym: CYB_0831

Alternate gene names: NA

Gene position: 862696-863940 (Clockwise)

Preceding gene: 86608312

Following gene: 86608314

Centisome position: 28.32

GC content: 62.33

Gene sequence:

>1245_bases
ATGGGTTTTTCTGAGTTTGAGGATCAAGATCCCATTGCAGCAGCGGAACGGACTGCTGCCCCCGATCCCAGCCGCCATTC
CCCGGATTCTGCCGGTGAGGAAGCCGCGATCTCCTCGGTTGCAAACTCTGGTGAAGGAAGGGAGCGGCAAGGTCGTCGTT
CTCCACCCCCTTTGCCGGAAGAGGGCTCAACCTTTGCAGGCGCAGAAGATTGGCTGGACGTTCGCGGTAGCGGGACGGAG
TCCTTGGAGAATGGGCGGGATAGCTACAGGGAGTCCGCGCAAGGGGCCACTTCTCGCCCTTCCAACCGCTCCCCCCAGAC
TGGCCGAGACGAGGGGTCTCGTGTTGACAGCGAAAAGGGGGGGCAGAAAGCCGCTGCAGGAGGAGCTGGTGAGCGCCCTG
GGCAAGCGCTAGTTCCCCGCCGTTCTGTCTCCAGCAACCGCAGCTACGACGGATCCGCCCGTTCCTCTGCCTTTCGCGGT
AGCGGGACGGAGTCCTTTGCTGGCCGCTCGCGTAAGCGGGACGGAGTCCTTGGGGAATCCGGCTACCGCAGTGACTACAG
CCGTTCCGCTCCTTATGGCTACACCTCCAGCTATGTTGGCGGTGGGGGATATGGCGGTGGTGGGCGAGGCGGCAGCTCCA
GCGGGGGGGTCTCCTCCTCCGATCTGACGATCCTGCTGGTGGTGGCCCTGCTGGCCTTCTTCGGGGGATTCGCTATCCGC
AACATCTTCGCCGAGTCGGGCGGCTTTGACGATGAGCGCCCCATCCGCGCTGCCAATGTGCCCGCAGCCTTTCGCGATTT
TTGCTTTGCCTATAACGGCACTGCCTCCTTTACTGTGGTGCAACTGACCAGCGTTTCTGCTCTGACCATGGCCTCAGTGC
CCGTTTACAAGATGGATACTTGCACCATCCCCGTCAGCCAAACGGCCAATGCCCTCCAAGCTTTGGGCATCCGCGGCCGG
GCCAACACCTTGGGCCCCCAGCTGGGGGGATCCAACCTCACCCTGATCCAGCTCCCCTTGGCCAGCAGCTTGGCGCGCGC
CGTGTACAGCCAGTTTCCTGGCTTGGCTACTCAGGGCAACGAGGCGCAGGTTTTGTCCCAACTGGAAGCCACCATCAACA
ACGCCCTGCGCTCCAACATCGAAGGGTTAGCCCTGCAAAGCCTGGAGCCCACCAACATCCCCGACGTCTACGTGATGGTG
CCGGGGCACTCCTTTAATTTGCAGCCCCAACTCAACCTGCGCTAA

Upstream 100 bases:

>100_bases
CTGGCTGGGGAGCTGCTAGCATACAATAGTCCCTTCCCTTCGGGGGAGTGAAATTGAAAGCCGTCTTGCCTTGGCAGCTG
AGGGGAGCGCTCGAAGAACT

Downstream 100 bases:

>100_bases
CCCTCCTGCAGAGGACGACGGTGTGTTCATCACCCTAGAAGGCGGGGAAGGGGTGGGCAAAACCACCCAACAGGCCCTCT
TGGTTGAGCGGCTGCGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MGFSEFEDQDPIAAAERTAAPDPSRHSPDSAGEEAAISSVANSGEGRERQGRRSPPPLPEEGSTFAGAEDWLDVRGSGTE
SLENGRDSYRESAQGATSRPSNRSPQTGRDEGSRVDSEKGGQKAAAGGAGERPGQALVPRRSVSSNRSYDGSARSSAFRG
SGTESFAGRSRKRDGVLGESGYRSDYSRSAPYGYTSSYVGGGGYGGGGRGGSSSGGVSSSDLTILLVVALLAFFGGFAIR
NIFAESGGFDDERPIRAANVPAAFRDFCFAYNGTASFTVVQLTSVSALTMASVPVYKMDTCTIPVSQTANALQALGIRGR
ANTLGPQLGGSNLTLIQLPLASSLARAVYSQFPGLATQGNEAQVLSQLEATINNALRSNIEGLALQSLEPTNIPDVYVMV
PGHSFNLQPQLNLR

Sequences:

>Translated_414_residues
MGFSEFEDQDPIAAAERTAAPDPSRHSPDSAGEEAAISSVANSGEGRERQGRRSPPPLPEEGSTFAGAEDWLDVRGSGTE
SLENGRDSYRESAQGATSRPSNRSPQTGRDEGSRVDSEKGGQKAAAGGAGERPGQALVPRRSVSSNRSYDGSARSSAFRG
SGTESFAGRSRKRDGVLGESGYRSDYSRSAPYGYTSSYVGGGGYGGGGRGGSSSGGVSSSDLTILLVVALLAFFGGFAIR
NIFAESGGFDDERPIRAANVPAAFRDFCFAYNGTASFTVVQLTSVSALTMASVPVYKMDTCTIPVSQTANALQALGIRGR
ANTLGPQLGGSNLTLIQLPLASSLARAVYSQFPGLATQGNEAQVLSQLEATINNALRSNIEGLALQSLEPTNIPDVYVMV
PGHSFNLQPQLNLR
>Mature_413_residues
GFSEFEDQDPIAAAERTAAPDPSRHSPDSAGEEAAISSVANSGEGRERQGRRSPPPLPEEGSTFAGAEDWLDVRGSGTES
LENGRDSYRESAQGATSRPSNRSPQTGRDEGSRVDSEKGGQKAAAGGAGERPGQALVPRRSVSSNRSYDGSARSSAFRGS
GTESFAGRSRKRDGVLGESGYRSDYSRSAPYGYTSSYVGGGGYGGGGRGGSSSGGVSSSDLTILLVVALLAFFGGFAIRN
IFAESGGFDDERPIRAANVPAAFRDFCFAYNGTASFTVVQLTSVSALTMASVPVYKMDTCTIPVSQTANALQALGIRGRA
NTLGPQLGGSNLTLIQLPLASSLARAVYSQFPGLATQGNEAQVLSQLEATINNALRSNIEGLALQSLEPTNIPDVYVMVP
GHSFNLQPQLNLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43158; Mature: 43026

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFSEFEDQDPIAAAERTAAPDPSRHSPDSAGEEAAISSVANSGEGRERQGRRSPPPLPE
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCC
EGSTFAGAEDWLDVRGSGTESLENGRDSYRESAQGATSRPSNRSPQTGRDEGSRVDSEKG
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GQKAAAGGAGERPGQALVPRRSVSSNRSYDGSARSSAFRGSGTESFAGRSRKRDGVLGES
CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCC
GYRSDYSRSAPYGYTSSYVGGGGYGGGGRGGSSSGGVSSSDLTILLVVALLAFFGGFAIR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
NIFAESGGFDDERPIRAANVPAAFRDFCFAYNGTASFTVVQLTSVSALTMASVPVYKMDT
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCEEECCE
CTIPVSQTANALQALGIRGRANTLGPQLGGSNLTLIQLPLASSLARAVYSQFPGLATQGN
EEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCC
EAQVLSQLEATINNALRSNIEGLALQSLEPTNIPDVYVMVPGHSFNLQPQLNLR
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
GFSEFEDQDPIAAAERTAAPDPSRHSPDSAGEEAAISSVANSGEGRERQGRRSPPPLPE
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCC
EGSTFAGAEDWLDVRGSGTESLENGRDSYRESAQGATSRPSNRSPQTGRDEGSRVDSEKG
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GQKAAAGGAGERPGQALVPRRSVSSNRSYDGSARSSAFRGSGTESFAGRSRKRDGVLGES
CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCC
GYRSDYSRSAPYGYTSSYVGGGGYGGGGRGGSSSGGVSSSDLTILLVVALLAFFGGFAIR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
NIFAESGGFDDERPIRAANVPAAFRDFCFAYNGTASFTVVQLTSVSALTMASVPVYKMDT
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCEEECCE
CTIPVSQTANALQALGIRGRANTLGPQLGGSNLTLIQLPLASSLARAVYSQFPGLATQGN
EEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCC
EAQVLSQLEATINNALRSNIEGLALQSLEPTNIPDVYVMVPGHSFNLQPQLNLR
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA