| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608311
Identifier: 86608311
GI number: 86608311
Start: 861249
End: 861914
Strand: Direct
Name: 86608311
Synonym: CYB_0829
Alternate gene names: NA
Gene position: 861249-861914 (Clockwise)
Preceding gene: 86608310
Following gene: 86608312
Centisome position: 28.27
GC content: 60.06
Gene sequence:
>666_bases ATGGGGATTAAACTGCTGCTCGGCTCCGACTACCACGGCAGCCCTCGGCTGATCCGGCAGGCCCTTGCCCATCTGCCGGA GGTGGATGCTTACATCAACTGTGGGGATTTCTGTTCCAAGGCCGGCAAACCTTCCCGCAAGGCCACCCAGGGCTTTCATC CGGCAGCCCAAGCAGAGGTGGTTCATCTGCAATCCTTTTTGGCGGCAGTGGAGAGCCTGGGCAAACCCTGGCTCTTTTTA CCTGGCAACCACGATCCAGCAGCTTCGGTTTTGAATTCGCTGGTTGGCTGTTGGGGGCGGGCCATCACCCAGTCCTGCTG CTTTGAGTGGCTGGGGTTACAGGTTTTGGCTGTGCCCTGGACTCCCCCCTGTGGTTGGAGCTGGTCTCTCACCTCCGCCC ATTTGCAGGAGCTGCTCACCCTCTACAGTCAGCCCCCCCGGCCCATTGACCTGCTGCTCACCCACGCTCCGCCGCGAGGC TTTTTGGATGAAGGCGGGAAGTGGTATCACCGTCGCACACCCACCTTGCGCCCCCTTTTGGAACAGGTGCAGCCCCGCTA CTACATCTGCGGACACATGCACTGGGATGGGGGCAAGGTAGAGCGATGGGGATCCACCCTGGTGATTAACACAGCCCTGC ACAACATGGTTCTCGAGATCCATTAG
Upstream 100 bases:
>100_bases GAAGAACTGGAAGCCCAGCAAGCTTGGTACAGCAGCTCCTGGCAGCAGGTTGCCGCCCTGCTTCAGCGATCCCACCTGGA TTCTTCTGCTGCAGAGGCCC
Downstream 100 bases:
>100_bases GCAGGAAGCCCTTGGACAGCCTTCCGCCTCCTCAGATTTCCACTCGTAGGAACCTTCCATGACCCGTCCTTTGATCTTGG CCAGCAGTAGCCCCGGCAAA
Product: Ser/Thr protein phosphatase family protein superfamily
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein Superfamily
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MGIKLLLGSDYHGSPRLIRQALAHLPEVDAYINCGDFCSKAGKPSRKATQGFHPAAQAEVVHLQSFLAAVESLGKPWLFL PGNHDPAASVLNSLVGCWGRAITQSCCFEWLGLQVLAVPWTPPCGWSWSLTSAHLQELLTLYSQPPRPIDLLLTHAPPRG FLDEGGKWYHRRTPTLRPLLEQVQPRYYICGHMHWDGGKVERWGSTLVINTALHNMVLEIH
Sequences:
>Translated_221_residues MGIKLLLGSDYHGSPRLIRQALAHLPEVDAYINCGDFCSKAGKPSRKATQGFHPAAQAEVVHLQSFLAAVESLGKPWLFL PGNHDPAASVLNSLVGCWGRAITQSCCFEWLGLQVLAVPWTPPCGWSWSLTSAHLQELLTLYSQPPRPIDLLLTHAPPRG FLDEGGKWYHRRTPTLRPLLEQVQPRYYICGHMHWDGGKVERWGSTLVINTALHNMVLEIH >Mature_220_residues GIKLLLGSDYHGSPRLIRQALAHLPEVDAYINCGDFCSKAGKPSRKATQGFHPAAQAEVVHLQSFLAAVESLGKPWLFLP GNHDPAASVLNSLVGCWGRAITQSCCFEWLGLQVLAVPWTPPCGWSWSLTSAHLQELLTLYSQPPRPIDLLLTHAPPRGF LDEGGKWYHRRTPTLRPLLEQVQPRYYICGHMHWDGGKVERWGSTLVINTALHNMVLEIH
Specific function: Unknown
COG id: COG2129
COG function: function code R; Predicted phosphoesterases, related to the Icc protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24626; Mature: 24494
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKLLLGSDYHGSPRLIRQALAHLPEVDAYINCGDFCSKAGKPSRKATQGFHPAAQAEV CCEEEEECCCCCCCHHHHHHHHHHCCCCCCEECCHHHHHHCCCCCCHHHCCCCCHHHHHH VHLQSFLAAVESLGKPWLFLPGNHDPAASVLNSLVGCWGRAITQSCCFEWLGLQVLAVPW HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC TPPCGWSWSLTSAHLQELLTLYSQPPRPIDLLLTHAPPRGFLDEGGKWYHRRTPTLRPLL CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCHHHHH EQVQPRYYICGHMHWDGGKVERWGSTLVINTALHNMVLEIH HHCCCCEEEEEEEECCCCCEECCCCEEEEHHHHHHEEEECC >Mature Secondary Structure GIKLLLGSDYHGSPRLIRQALAHLPEVDAYINCGDFCSKAGKPSRKATQGFHPAAQAEV CEEEEECCCCCCCHHHHHHHHHHCCCCCCEECCHHHHHHCCCCCCHHHCCCCCHHHHHH VHLQSFLAAVESLGKPWLFLPGNHDPAASVLNSLVGCWGRAITQSCCFEWLGLQVLAVPW HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC TPPCGWSWSLTSAHLQELLTLYSQPPRPIDLLLTHAPPRGFLDEGGKWYHRRTPTLRPLL CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCHHHHH EQVQPRYYICGHMHWDGGKVERWGSTLVINTALHNMVLEIH HHCCCCEEEEEEEECCCCCEECCCCEEEEHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA