Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608273

Identifier: 86608273

GI number: 86608273

Start: 815416

End: 816528

Strand: Reverse

Name: 86608273

Synonym: CYB_0789

Alternate gene names: NA

Gene position: 816528-815416 (Counterclockwise)

Preceding gene: 86608274

Following gene: 86608272

Centisome position: 26.8

GC content: 61.37

Gene sequence:

>1113_bases
ATGAATCCCGTTCCTCTCTATGTGGCGGCAACAGCGCACGGGTTTGGGCACGTTACCCGTCTGGCGGCAGTGGTGAATGC
TTTGCTGCGGCAGGATCCCCATGTTCTGCCCATCTTTGTTACGCCGGCTCCCCGCTGGCTCCTGGAGCGTTACGTGGAGG
GGAAGTTTCTCCATCGGCCGCGGGCGTTGGATGTGGGGGTGGTGCAGCCGGATGGGCTGCAAGCGGATCTGCCGGCTACG
TTGGCTGCCCTCAAGGCGTTTAAAGCCAGCGCTGCGGAGCTTGTTCGAGAAGAAGCGGATTTCATTCGAGCCCAGGGGGT
GCCTTTGGTGTTGGCGGATGTGCCGCCCATTGCTGCGGCGATTGCCCAGGCTGCTGGGATCCCTTGCTGGATGGCCAGTA
ATTTTGGCTGGGATTTCATCTACCAAGAATACGGCCCGGAGTTTCAACCGTTTGTGGCCTGGATCCAGGAGCTCTATGGG
CAATGTGACCTTCTGTTTCGCCTGCCCTTTAGCGAGAGCATGGTCGCGTCAGCGGTGCGGAGCACTAGCGCTTTTCCGCG
TCAGCAGGAGGTGGGGCTGACGGGATCGGATCCCCGCTACCCACCAGAAGAGGTCGCCGCCCAGTTGGGGTTACACCCGG
ATCAACCCAGGGCTTTGTTCACCTTTGGCGGGCTGGGGGTGCAGGGGTTTCCTTACGAGCGGCTCCAAGATTTTCCCGAC
TGGCAGTTTCTCACCTTTGATCCGGAAGCTCCCCCCTTGCCCAACTTGCGGGTTTTGGATGGGCGGGTGTGGCGACCGGT
GGATGTGATGCCCCTCTGCCGCTGGGTGGTGTCCAAGCCGGGCTATGGCACTTTGGCAGAGGCCCTGCGCAGCCGCACAC
CTATGGCCTGTGTTACCCGCTCTGGGTTTGCCGAGTCGCCGTTGCTGGTTGAGGGTCTGCAGCGCTACGGCTGGCATCGC
ATTCTCTCGCCAGAGGAGTTTTTTCAAGGATCCTGGGACTTTTTGCGGGATCCCGCCCACCCACCCCAGAGGCCGGATGG
ATTGGATCTGCAGGGGAATGAAACCCTGGCTGCTGCCTTAGAGGCATTCCTGCGGGGAAGGGATGCCGGGTAG

Upstream 100 bases:

>100_bases
GATCCTGTTCTGTCCTGAGGCGGTTGCGTTCGCGCCAGCGGGACGGAGTCCTATCGCGTTAGCGGGACGGAGTCCTATCG
CGTTAGCGGTGCAGAGCACA

Downstream 100 bases:

>100_bases
CATAAAGGGCAGCTTCCTGCAGCGGATCCCATGGCCAGCAGCTCGACAGAATCTCTGCGGCAACTGTACGAAGAACTGCC
CTACCCCAATGTTTCCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MNPVPLYVAATAHGFGHVTRLAAVVNALLRQDPHVLPIFVTPAPRWLLERYVEGKFLHRPRALDVGVVQPDGLQADLPAT
LAALKAFKASAAELVREEADFIRAQGVPLVLADVPPIAAAIAQAAGIPCWMASNFGWDFIYQEYGPEFQPFVAWIQELYG
QCDLLFRLPFSESMVASAVRSTSAFPRQQEVGLTGSDPRYPPEEVAAQLGLHPDQPRALFTFGGLGVQGFPYERLQDFPD
WQFLTFDPEAPPLPNLRVLDGRVWRPVDVMPLCRWVVSKPGYGTLAEALRSRTPMACVTRSGFAESPLLVEGLQRYGWHR
ILSPEEFFQGSWDFLRDPAHPPQRPDGLDLQGNETLAAALEAFLRGRDAG

Sequences:

>Translated_370_residues
MNPVPLYVAATAHGFGHVTRLAAVVNALLRQDPHVLPIFVTPAPRWLLERYVEGKFLHRPRALDVGVVQPDGLQADLPAT
LAALKAFKASAAELVREEADFIRAQGVPLVLADVPPIAAAIAQAAGIPCWMASNFGWDFIYQEYGPEFQPFVAWIQELYG
QCDLLFRLPFSESMVASAVRSTSAFPRQQEVGLTGSDPRYPPEEVAAQLGLHPDQPRALFTFGGLGVQGFPYERLQDFPD
WQFLTFDPEAPPLPNLRVLDGRVWRPVDVMPLCRWVVSKPGYGTLAEALRSRTPMACVTRSGFAESPLLVEGLQRYGWHR
ILSPEEFFQGSWDFLRDPAHPPQRPDGLDLQGNETLAAALEAFLRGRDAG
>Mature_370_residues
MNPVPLYVAATAHGFGHVTRLAAVVNALLRQDPHVLPIFVTPAPRWLLERYVEGKFLHRPRALDVGVVQPDGLQADLPAT
LAALKAFKASAAELVREEADFIRAQGVPLVLADVPPIAAAIAQAAGIPCWMASNFGWDFIYQEYGPEFQPFVAWIQELYG
QCDLLFRLPFSESMVASAVRSTSAFPRQQEVGLTGSDPRYPPEEVAAQLGLHPDQPRALFTFGGLGVQGFPYERLQDFPD
WQFLTFDPEAPPLPNLRVLDGRVWRPVDVMPLCRWVVSKPGYGTLAEALRSRTPMACVTRSGFAESPLLVEGLQRYGWHR
ILSPEEFFQGSWDFLRDPAHPPQRPDGLDLQGNETLAAALEAFLRGRDAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40946; Mature: 40946

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVPLYVAATAHGFGHVTRLAAVVNALLRQDPHVLPIFVTPAPRWLLERYVEGKFLHRP
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCHHHCCC
RALDVGVVQPDGLQADLPATLAALKAFKASAAELVREEADFIRAQGVPLVLADVPPIAAA
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH
IAQAAGIPCWMASNFGWDFIYQEYGPEFQPFVAWIQELYGQCDLLFRLPFSESMVASAVR
HHHHCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
STSAFPRQQEVGLTGSDPRYPPEEVAAQLGLHPDQPRALFTFGGLGVQGFPYERLQDFPD
HHCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHCCCC
WQFLTFDPEAPPLPNLRVLDGRVWRPVDVMPLCRWVVSKPGYGTLAEALRSRTPMACVTR
CEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEC
SGFAESPLLVEGLQRYGWHRILSPEEFFQGSWDFLRDPAHPPQRPDGLDLQGNETLAAAL
CCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHH
EAFLRGRDAG
HHHHHCCCCC
>Mature Secondary Structure
MNPVPLYVAATAHGFGHVTRLAAVVNALLRQDPHVLPIFVTPAPRWLLERYVEGKFLHRP
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCHHHCCC
RALDVGVVQPDGLQADLPATLAALKAFKASAAELVREEADFIRAQGVPLVLADVPPIAAA
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH
IAQAAGIPCWMASNFGWDFIYQEYGPEFQPFVAWIQELYGQCDLLFRLPFSESMVASAVR
HHHHCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
STSAFPRQQEVGLTGSDPRYPPEEVAAQLGLHPDQPRALFTFGGLGVQGFPYERLQDFPD
HHCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHCCCC
WQFLTFDPEAPPLPNLRVLDGRVWRPVDVMPLCRWVVSKPGYGTLAEALRSRTPMACVTR
CEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEC
SGFAESPLLVEGLQRYGWHRILSPEEFFQGSWDFLRDPAHPPQRPDGLDLQGNETLAAAL
CCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHH
EAFLRGRDAG
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA