| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608272
Identifier: 86608272
GI number: 86608272
Start: 814084
End: 815385
Strand: Reverse
Name: 86608272
Synonym: CYB_0788
Alternate gene names: NA
Gene position: 815385-814084 (Counterclockwise)
Preceding gene: 86608273
Following gene: 86608271
Centisome position: 26.76
GC content: 58.91
Gene sequence:
>1302_bases ATGGCCAGCAGCTCGACAGAATCTCTGCGGCAACTGTACGAAGAACTGCCCTACCCCAATGTTTCCATTGAGGCCTCGGG CCGCAACGCCATTGACGGGTTGTACCGCCTAAGTTTGACCACCGCCCAATACGCCCGCACCCGCGCCATTGTGCCCAGCG AAGGCGCTCTCATTTTGAATGCTGGCTGCGGCTCTGGCTGGGAAACGTTGATCCTGGCGGAGGCCAATCCAGGGGCGCGG CTGGTGGTGTGCGACCTGTCAGCAGAGTCGGTACGGGTGACGGAGCGACGCTTGCGCTACCACGGTTTTGGAGAGGTGGA GTTGTATGTTCTCGACCTGTTGGATATCGAACAGTTGGGGTTGGAATTTGACTTCATCAGCCTCAACGATGTGCTCTATC TGCTGGACGATCCGGTGGCGGGGCTAAAAGCCCTCAAGCGGGTTCTCAAACCTGACGGGATCCTGCGGGCCAACCTACAT CACGCCTACCAGCGGGAGGTCATCTTCCGCATGCAAGAGGCGTTTCGGCTGCTGGGGCTATTTGATCTGCCCACCCCTGA AGCCTGTCAGCGGGTGCGGGAATTCATGGCCAGTTTGGCCTCGGACGAAATGCGGGCAGCCCTGCGCTGGAACCCTGAGA TCTACAAAGACGACACCAACATCCGGGCCAACTACCTCTTGCCAGGAGACAAGGGCTTCCTGATCCCCGACCTGATGCGC ATGCTCGCAGACGCCGATCTGGGCCTTGTCTGCTTGGTGGACTATGCCGACTGGGATCCGGCGCTTTTGTTCAAGGAGAG GGCCATGCCCCCCTGGTTGCAAGCTGAGCTGGACAAACTCTCGCCTGCCGACCAGAATCACTTTTATGAGCTGATCTACC CCAACCATCGCCTCATTGACTTTTGGGCGGAACACCCCGGCTCTTCCTTGGTCTTGCCCTGGAGCGACGCCGATTGGCTG GGGGGCAGAGTGCAGCTCAACCCCATCCTGGCCGACAACGTCGAATTTCGCCAAAGCTTCGCCAAAGCCTACGAGAAGAA GCTGGAGTTTGCCATGAATTGGCCGGGATCCAGCTATGGGCGCCTGACCATCTCAGCCCCTCAGATGGCTTGGTTGGGAT CCCTGTTGCAGGGGCCAACGCCGGTGAAGGCCATGATTGAGCAGGCAGCTCAGGTCAACACGTTAGAGCCGGAAGCGGCC CAGGAGGAGGTGCTCACCTACCTGGCAGGGCTGGAGTCGTTTTTGTTTGTGATGTTGGATCCTGCACCCGTTCCAGGAGA AGGAGTTTTTCCAATCGCTTGA
Upstream 100 bases:
>100_bases GGATCTGCAGGGGAATGAAACCCTGGCTGCTGCCTTAGAGGCATTCCTGCGGGGAAGGGATGCCGGGTAGCATAAAGGGC AGCTTCCTGCAGCGGATCCC
Downstream 100 bases:
>100_bases GATCCCCGAGCCTTTCTCCCAAGGGTAGAGGGAAGCCAATGGGCCGGTTCACGGCAACTTGGAACGACTATTGAGGGATT GAGGCTCTGCCGGGCTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MASSSTESLRQLYEELPYPNVSIEASGRNAIDGLYRLSLTTAQYARTRAIVPSEGALILNAGCGSGWETLILAEANPGAR LVVCDLSAESVRVTERRLRYHGFGEVELYVLDLLDIEQLGLEFDFISLNDVLYLLDDPVAGLKALKRVLKPDGILRANLH HAYQREVIFRMQEAFRLLGLFDLPTPEACQRVREFMASLASDEMRAALRWNPEIYKDDTNIRANYLLPGDKGFLIPDLMR MLADADLGLVCLVDYADWDPALLFKERAMPPWLQAELDKLSPADQNHFYELIYPNHRLIDFWAEHPGSSLVLPWSDADWL GGRVQLNPILADNVEFRQSFAKAYEKKLEFAMNWPGSSYGRLTISAPQMAWLGSLLQGPTPVKAMIEQAAQVNTLEPEAA QEEVLTYLAGLESFLFVMLDPAPVPGEGVFPIA
Sequences:
>Translated_433_residues MASSSTESLRQLYEELPYPNVSIEASGRNAIDGLYRLSLTTAQYARTRAIVPSEGALILNAGCGSGWETLILAEANPGAR LVVCDLSAESVRVTERRLRYHGFGEVELYVLDLLDIEQLGLEFDFISLNDVLYLLDDPVAGLKALKRVLKPDGILRANLH HAYQREVIFRMQEAFRLLGLFDLPTPEACQRVREFMASLASDEMRAALRWNPEIYKDDTNIRANYLLPGDKGFLIPDLMR MLADADLGLVCLVDYADWDPALLFKERAMPPWLQAELDKLSPADQNHFYELIYPNHRLIDFWAEHPGSSLVLPWSDADWL GGRVQLNPILADNVEFRQSFAKAYEKKLEFAMNWPGSSYGRLTISAPQMAWLGSLLQGPTPVKAMIEQAAQVNTLEPEAA QEEVLTYLAGLESFLFVMLDPAPVPGEGVFPIA >Mature_432_residues ASSSTESLRQLYEELPYPNVSIEASGRNAIDGLYRLSLTTAQYARTRAIVPSEGALILNAGCGSGWETLILAEANPGARL VVCDLSAESVRVTERRLRYHGFGEVELYVLDLLDIEQLGLEFDFISLNDVLYLLDDPVAGLKALKRVLKPDGILRANLHH AYQREVIFRMQEAFRLLGLFDLPTPEACQRVREFMASLASDEMRAALRWNPEIYKDDTNIRANYLLPGDKGFLIPDLMRM LADADLGLVCLVDYADWDPALLFKERAMPPWLQAELDKLSPADQNHFYELIYPNHRLIDFWAEHPGSSLVLPWSDADWLG GRVQLNPILADNVEFRQSFAKAYEKKLEFAMNWPGSSYGRLTISAPQMAWLGSLLQGPTPVKAMIEQAAQVNTLEPEAAQ EEVLTYLAGLESFLFVMLDPAPVPGEGVFPIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2067c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 48505; Mature: 48374
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSSTESLRQLYEELPYPNVSIEASGRNAIDGLYRLSLTTAQYARTRAIVPSEGALILN CCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHEEEHHHHHHHHEEECCCCCCEEEE AGCGSGWETLILAEANPGARLVVCDLSAESVRVTERRLRYHGFGEVELYVLDLLDIEQLG CCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHC LEFDFISLNDVLYLLDDPVAGLKALKRVLKPDGILRANLHHAYQREVIFRMQEAFRLLGL CEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC FDLPTPEACQRVREFMASLASDEMRAALRWNPEIYKDDTNIRANYLLPGDKGFLIPDLMR CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCCCHHHHHH MLADADLGLVCLVDYADWDPALLFKERAMPPWLQAELDKLSPADQNHFYELIYPNHRLID HHHCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEE FWAEHPGSSLVLPWSDADWLGGRVQLNPILADNVEFRQSFAKAYEKKLEFAMNWPGSSYG EECCCCCCEEEEECCCCCCCCCEEEECCEEECCHHHHHHHHHHHHHHHHEEECCCCCCCC RLTISAPQMAWLGSLLQGPTPVKAMIEQAAQVNTLEPEAAQEEVLTYLAGLESFLFVMLD EEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEC PAPVPGEGVFPIA CCCCCCCCCCCCC >Mature Secondary Structure ASSSTESLRQLYEELPYPNVSIEASGRNAIDGLYRLSLTTAQYARTRAIVPSEGALILN CCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHEEEHHHHHHHHEEECCCCCCEEEE AGCGSGWETLILAEANPGARLVVCDLSAESVRVTERRLRYHGFGEVELYVLDLLDIEQLG CCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHC LEFDFISLNDVLYLLDDPVAGLKALKRVLKPDGILRANLHHAYQREVIFRMQEAFRLLGL CEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC FDLPTPEACQRVREFMASLASDEMRAALRWNPEIYKDDTNIRANYLLPGDKGFLIPDLMR CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCCCHHHHHH MLADADLGLVCLVDYADWDPALLFKERAMPPWLQAELDKLSPADQNHFYELIYPNHRLID HHHCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEE FWAEHPGSSLVLPWSDADWLGGRVQLNPILADNVEFRQSFAKAYEKKLEFAMNWPGSSYG EECCCCCCEEEEECCCCCCCCCEEEECCEEECCHHHHHHHHHHHHHHHHEEECCCCCCCC RLTISAPQMAWLGSLLQGPTPVKAMIEQAAQVNTLEPEAAQEEVLTYLAGLESFLFVMLD EEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEC PAPVPGEGVFPIA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3041005; 1901865 [H]