Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608271

Identifier: 86608271

GI number: 86608271

Start: 813091

End: 813960

Strand: Reverse

Name: 86608271

Synonym: CYB_0787

Alternate gene names: NA

Gene position: 813960-813091 (Counterclockwise)

Preceding gene: 86608272

Following gene: 86608270

Centisome position: 26.72

GC content: 59.43

Gene sequence:

>870_bases
ATGGGAAGAGATCCCTCTCTAGCGATCCACCAGGCGCAGCTCGAAGGTGAGGATGTTGGCGGCCAAAATCTCCAAAGCCC
CGCCCTCGATAAGGTCGCGAGTGAGGGCAGCTCCGGAGCCACTTTGTTGGATCAATTCGCGGCTGCGGCGCACCGTCTCT
TGTCGCTGGGGATCATCCACAACCACCTGCCGCTGATTGGACAGGCTGAGGCGATAGAAATTGGGCAAATCTCCCCGGGT
GGCATCAATGGCCAGATTGGTCTCTTCGGGGGCCACACGGAAGGGGGCGCGAGCGGTGAGCAGAGCCACCTGAATATCTT
GATCCCGCCCATCGAGACCCTGCAGCTCGGAGATATCGATCTGGAAATTGAGGGTATCGCGGTCACGGGTAAGGCGATTA
ACCCGTACCTGGTTAAAGCCAACGGCAAACTCTCGTTCCGGCTCTCCAAACCGCTGGATGGTGGCTTGCAAGACCGACTC
TTCGTTGAGGGGGGTAACCCGAATGAGGTAATCCCAGTCCCGCACAAAGGTGTACTCGTTGAGCCCCACACGGACGTTGG
GATCCACCAAGTTGGCGGTAGGGCCAGGGCTGCCGGCCCGGCTGAGAGCTACCATGTACCAGTAGTTGGGGCTGATGGGC
AAACCCAGGGTCATGCGTACTTCCAGCACTGGCCGCGCCCAAGCGGCAACAGCCGTGAGAGCCGTTATGGCCATGGCTCC
CAAGCAACTCCACAGCCAGCGCTGAGGAGGAAAATTAAGCTGCGGCGGGCAAGAGCAAGTGATGGCTGGGGTTCTCATTC
AAGCCTCTTCAACTCTCCGGCAGGTGGCGGCAGCCTGAACTCCTTTCCTGCTCACTCTGGAACAGTCTAG

Upstream 100 bases:

>100_bases
GGTAGAGGGAAGCCAATGGGCCGGTTCACGGCAACTTGGAACGACTATTGAGGGATTGAGGCTCTGCCGGGCTGCAAGAA
CGGTCTTGGGCAGATGTCAG

Downstream 100 bases:

>100_bases
CCAGGAATGGCGTGCCCTCAACAGGGGATCCCAAGGGTCGGCGGCGGAGCGCCAGCAGAAGTTTTCGTTAAGCAGTGATG
ATTCGGTGTGGAGGATGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MGRDPSLAIHQAQLEGEDVGGQNLQSPALDKVASEGSSGATLLDQFAAAAHRLLSLGIIHNHLPLIGQAEAIEIGQISPG
GINGQIGLFGGHTEGGASGEQSHLNILIPPIETLQLGDIDLEIEGIAVTGKAINPYLVKANGKLSFRLSKPLDGGLQDRL
FVEGGNPNEVIPVPHKGVLVEPHTDVGIHQVGGRARAAGPAESYHVPVVGADGQTQGHAYFQHWPRPSGNSRESRYGHGS
QATPQPALRRKIKLRRARASDGWGSHSSLFNSPAGGGSLNSFPAHSGTV

Sequences:

>Translated_289_residues
MGRDPSLAIHQAQLEGEDVGGQNLQSPALDKVASEGSSGATLLDQFAAAAHRLLSLGIIHNHLPLIGQAEAIEIGQISPG
GINGQIGLFGGHTEGGASGEQSHLNILIPPIETLQLGDIDLEIEGIAVTGKAINPYLVKANGKLSFRLSKPLDGGLQDRL
FVEGGNPNEVIPVPHKGVLVEPHTDVGIHQVGGRARAAGPAESYHVPVVGADGQTQGHAYFQHWPRPSGNSRESRYGHGS
QATPQPALRRKIKLRRARASDGWGSHSSLFNSPAGGGSLNSFPAHSGTV
>Mature_288_residues
GRDPSLAIHQAQLEGEDVGGQNLQSPALDKVASEGSSGATLLDQFAAAAHRLLSLGIIHNHLPLIGQAEAIEIGQISPGG
INGQIGLFGGHTEGGASGEQSHLNILIPPIETLQLGDIDLEIEGIAVTGKAINPYLVKANGKLSFRLSKPLDGGLQDRLF
VEGGNPNEVIPVPHKGVLVEPHTDVGIHQVGGRARAAGPAESYHVPVVGADGQTQGHAYFQHWPRPSGNSRESRYGHGSQ
ATPQPALRRKIKLRRARASDGWGSHSSLFNSPAGGGSLNSFPAHSGTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30129; Mature: 29998

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRDPSLAIHQAQLEGEDVGGQNLQSPALDKVASEGSSGATLLDQFAAAAHRLLSLGIIH
CCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
NHLPLIGQAEAIEIGQISPGGINGQIGLFGGHTEGGASGEQSHLNILIPPIETLQLGDID
HCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCEE
LEIEGIAVTGKAINPYLVKANGKLSFRLSKPLDGGLQDRLFVEGGNPNEVIPVPHKGVLV
EEEEEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCEEE
EPHTDVGIHQVGGRARAAGPAESYHVPVVGADGQTQGHAYFQHWPRPSGNSRESRYGHGS
CCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
QATPQPALRRKIKLRRARASDGWGSHSSLFNSPAGGGSLNSFPAHSGTV
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRDPSLAIHQAQLEGEDVGGQNLQSPALDKVASEGSSGATLLDQFAAAAHRLLSLGIIH
CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
NHLPLIGQAEAIEIGQISPGGINGQIGLFGGHTEGGASGEQSHLNILIPPIETLQLGDID
HCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCEE
LEIEGIAVTGKAINPYLVKANGKLSFRLSKPLDGGLQDRLFVEGGNPNEVIPVPHKGVLV
EEEEEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCEEE
EPHTDVGIHQVGGRARAAGPAESYHVPVVGADGQTQGHAYFQHWPRPSGNSRESRYGHGS
CCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
QATPQPALRRKIKLRRARASDGWGSHSSLFNSPAGGGSLNSFPAHSGTV
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA