Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608270

Identifier: 86608270

GI number: 86608270

Start: 811920

End: 812990

Strand: Reverse

Name: 86608270

Synonym: CYB_0786

Alternate gene names: NA

Gene position: 812990-811920 (Counterclockwise)

Preceding gene: 86608271

Following gene: 86608269

Centisome position: 26.68

GC content: 59.29

Gene sequence:

>1071_bases
ATGCGCATTGCTCAGATTGCCCCTTTGCATGAGAGTGTGCCCCCCAAGCTCTACGGCGGCACCGAGCGAGTTGTGTCTTG
GCTCACCGAAGAGCTGGTGCGGCGGGGGCATGAGGTGACGTTGTTTGCCAGCGGCGACTCCCAAACCCAAGCTCGCCTCA
TCCCCTTTCGGGAGCGGGCTTTGCGTTTGGATCCCACGGCCATCGACACAGTGGCTCCTCATATTTTGATGGTGGAGAAA
GCCTTTCAGATGGCCGACGAGTTTGACATTATCCACGGCCACATCGACTACTATCCCTATGCCCTGGCCCGTCGCCACCC
GCAGGTTTCTTTTTTGGCCACCCTACACGGGCGACTGGACATTCCGGAGCTGCAGCCCCTCTACACCGAGTTTCAGGACA
TTCCGGTGGTCTCCATCTCCAACGCCCAGCGGCTGCCGCTGCCCCAGGCCCGCTGGGTGGGGACGGTCTACCACGGCTTG
CCCCTGGATCTCCACCGTTTCTATCCAGAAAAGGGGGACTACCTGGCCTTTTTGGGCCGGGTCTCCCCGGAAAAAGGGCT
GGACACGGCTATTGAAATTGCGGCGCGGGCAGGGATGCCGCTGAAGGCTGCTATCAAGATCGATGCGGTGGATCGCCAGT
ACTACGAGTTAGAAATTAAGCCTTTGGCCAGTCGCCACCCCAATGTGGAGATCATAGGGGAAATCACCGACCAAGAGAAA
AGCGAGTTTTTGGGCAAGGCCTATGCGGTGCTGTTTCCCATCCGCTGGCCGGAGCCCTTTGGGCTGGTGATGATTGAAGC
GATGGCCTGTGGCACGCCGGTAATTGCCACCCGTTTTGGCTCAGTACCCGAGGTAATGGCCGACAGGCGCTCCGGCTTTA
TTGTCGACTCGGTGGAGGAAGCAGTGGAGGCTGTGGAGAAGGTGGGATCCCTGAGCCGAGCCGGGGTGCGGCAGGTGTTT
GAGGAGCGGTTCAGCGTGGAAAGAATGGTGTCGGACTACGAGGCTCTCTACCGCCAACTGGTGAACGAGCGGCAGGAGAT
GTCGCGAAGAAGGCAGCTTAATAAGGCTTAG

Upstream 100 bases:

>100_bases
CCAGGAATGGCGTGCCCTCAACAGGGGATCCCAAGGGTCGGCGGCGGAGCGCCAGCAGAAGTTTTCGTTAAGCAGTGATG
ATTCGGTGTGGAGGATGGCT

Downstream 100 bases:

>100_bases
ATGGGCCAAGTAGCAGCTAGGGCTGCTGGGCTGCATCGGGGGGCCCCTGCTTCTTCGCCTTCTTTGAGTGGACCGATAGC
AGTAAGCTGTTCGCGTAGGA

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRIAQIAPLHESVPPKLYGGTERVVSWLTEELVRRGHEVTLFASGDSQTQARLIPFRERALRLDPTAIDTVAPHILMVEK
AFQMADEFDIIHGHIDYYPYALARRHPQVSFLATLHGRLDIPELQPLYTEFQDIPVVSISNAQRLPLPQARWVGTVYHGL
PLDLHRFYPEKGDYLAFLGRVSPEKGLDTAIEIAARAGMPLKAAIKIDAVDRQYYELEIKPLASRHPNVEIIGEITDQEK
SEFLGKAYAVLFPIRWPEPFGLVMIEAMACGTPVIATRFGSVPEVMADRRSGFIVDSVEEAVEAVEKVGSLSRAGVRQVF
EERFSVERMVSDYEALYRQLVNERQEMSRRRQLNKA

Sequences:

>Translated_356_residues
MRIAQIAPLHESVPPKLYGGTERVVSWLTEELVRRGHEVTLFASGDSQTQARLIPFRERALRLDPTAIDTVAPHILMVEK
AFQMADEFDIIHGHIDYYPYALARRHPQVSFLATLHGRLDIPELQPLYTEFQDIPVVSISNAQRLPLPQARWVGTVYHGL
PLDLHRFYPEKGDYLAFLGRVSPEKGLDTAIEIAARAGMPLKAAIKIDAVDRQYYELEIKPLASRHPNVEIIGEITDQEK
SEFLGKAYAVLFPIRWPEPFGLVMIEAMACGTPVIATRFGSVPEVMADRRSGFIVDSVEEAVEAVEKVGSLSRAGVRQVF
EERFSVERMVSDYEALYRQLVNERQEMSRRRQLNKA
>Mature_356_residues
MRIAQIAPLHESVPPKLYGGTERVVSWLTEELVRRGHEVTLFASGDSQTQARLIPFRERALRLDPTAIDTVAPHILMVEK
AFQMADEFDIIHGHIDYYPYALARRHPQVSFLATLHGRLDIPELQPLYTEFQDIPVVSISNAQRLPLPQARWVGTVYHGL
PLDLHRFYPEKGDYLAFLGRVSPEKGLDTAIEIAARAGMPLKAAIKIDAVDRQYYELEIKPLASRHPNVEIIGEITDQEK
SEFLGKAYAVLFPIRWPEPFGLVMIEAMACGTPVIATRFGSVPEVMADRRSGFIVDSVEEAVEAVEKVGSLSRAGVRQVF
EERFSVERMVSDYEALYRQLVNERQEMSRRRQLNKA

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40361; Mature: 40361

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAQIAPLHESVPPKLYGGTERVVSWLTEELVRRGHEVTLFASGDSQTQARLIPFRERA
CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHEECCHHHHH
LRLDPTAIDTVAPHILMVEKAFQMADEFDIIHGHIDYYPYALARRHPQVSFLATLHGRLD
EECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCEEEEECCCCCC
IPELQPLYTEFQDIPVVSISNAQRLPLPQARWVGTVYHGLPLDLHRFYPEKGDYLAFLGR
CCCCCHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEC
VSPEKGLDTAIEIAARAGMPLKAAIKIDAVDRQYYELEIKPLASRHPNVEIIGEITDQEK
CCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCEEEEEECCCHHH
SEFLGKAYAVLFPIRWPEPFGLVMIEAMACGTPVIATRFGSVPEVMADRRSGFIVDSVEE
HHHHHHHEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHCCCCHHHHHHCCCCCCHHHHHH
AVEAVEKVGSLSRAGVRQVFEERFSVERMVSDYEALYRQLVNERQEMSRRRQLNKA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIAQIAPLHESVPPKLYGGTERVVSWLTEELVRRGHEVTLFASGDSQTQARLIPFRERA
CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHEECCHHHHH
LRLDPTAIDTVAPHILMVEKAFQMADEFDIIHGHIDYYPYALARRHPQVSFLATLHGRLD
EECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCEEEEECCCCCC
IPELQPLYTEFQDIPVVSISNAQRLPLPQARWVGTVYHGLPLDLHRFYPEKGDYLAFLGR
CCCCCHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEC
VSPEKGLDTAIEIAARAGMPLKAAIKIDAVDRQYYELEIKPLASRHPNVEIIGEITDQEK
CCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCEEEEEECCCHHH
SEFLGKAYAVLFPIRWPEPFGLVMIEAMACGTPVIATRFGSVPEVMADRRSGFIVDSVEE
HHHHHHHEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHCCCCHHHHHHCCCCCCHHHHHH
AVEAVEKVGSLSRAGVRQVFEERFSVERMVSDYEALYRQLVNERQEMSRRRQLNKA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]