| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608270
Identifier: 86608270
GI number: 86608270
Start: 811920
End: 812990
Strand: Reverse
Name: 86608270
Synonym: CYB_0786
Alternate gene names: NA
Gene position: 812990-811920 (Counterclockwise)
Preceding gene: 86608271
Following gene: 86608269
Centisome position: 26.68
GC content: 59.29
Gene sequence:
>1071_bases ATGCGCATTGCTCAGATTGCCCCTTTGCATGAGAGTGTGCCCCCCAAGCTCTACGGCGGCACCGAGCGAGTTGTGTCTTG GCTCACCGAAGAGCTGGTGCGGCGGGGGCATGAGGTGACGTTGTTTGCCAGCGGCGACTCCCAAACCCAAGCTCGCCTCA TCCCCTTTCGGGAGCGGGCTTTGCGTTTGGATCCCACGGCCATCGACACAGTGGCTCCTCATATTTTGATGGTGGAGAAA GCCTTTCAGATGGCCGACGAGTTTGACATTATCCACGGCCACATCGACTACTATCCCTATGCCCTGGCCCGTCGCCACCC GCAGGTTTCTTTTTTGGCCACCCTACACGGGCGACTGGACATTCCGGAGCTGCAGCCCCTCTACACCGAGTTTCAGGACA TTCCGGTGGTCTCCATCTCCAACGCCCAGCGGCTGCCGCTGCCCCAGGCCCGCTGGGTGGGGACGGTCTACCACGGCTTG CCCCTGGATCTCCACCGTTTCTATCCAGAAAAGGGGGACTACCTGGCCTTTTTGGGCCGGGTCTCCCCGGAAAAAGGGCT GGACACGGCTATTGAAATTGCGGCGCGGGCAGGGATGCCGCTGAAGGCTGCTATCAAGATCGATGCGGTGGATCGCCAGT ACTACGAGTTAGAAATTAAGCCTTTGGCCAGTCGCCACCCCAATGTGGAGATCATAGGGGAAATCACCGACCAAGAGAAA AGCGAGTTTTTGGGCAAGGCCTATGCGGTGCTGTTTCCCATCCGCTGGCCGGAGCCCTTTGGGCTGGTGATGATTGAAGC GATGGCCTGTGGCACGCCGGTAATTGCCACCCGTTTTGGCTCAGTACCCGAGGTAATGGCCGACAGGCGCTCCGGCTTTA TTGTCGACTCGGTGGAGGAAGCAGTGGAGGCTGTGGAGAAGGTGGGATCCCTGAGCCGAGCCGGGGTGCGGCAGGTGTTT GAGGAGCGGTTCAGCGTGGAAAGAATGGTGTCGGACTACGAGGCTCTCTACCGCCAACTGGTGAACGAGCGGCAGGAGAT GTCGCGAAGAAGGCAGCTTAATAAGGCTTAG
Upstream 100 bases:
>100_bases CCAGGAATGGCGTGCCCTCAACAGGGGATCCCAAGGGTCGGCGGCGGAGCGCCAGCAGAAGTTTTCGTTAAGCAGTGATG ATTCGGTGTGGAGGATGGCT
Downstream 100 bases:
>100_bases ATGGGCCAAGTAGCAGCTAGGGCTGCTGGGCTGCATCGGGGGGCCCCTGCTTCTTCGCCTTCTTTGAGTGGACCGATAGC AGTAAGCTGTTCGCGTAGGA
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MRIAQIAPLHESVPPKLYGGTERVVSWLTEELVRRGHEVTLFASGDSQTQARLIPFRERALRLDPTAIDTVAPHILMVEK AFQMADEFDIIHGHIDYYPYALARRHPQVSFLATLHGRLDIPELQPLYTEFQDIPVVSISNAQRLPLPQARWVGTVYHGL PLDLHRFYPEKGDYLAFLGRVSPEKGLDTAIEIAARAGMPLKAAIKIDAVDRQYYELEIKPLASRHPNVEIIGEITDQEK SEFLGKAYAVLFPIRWPEPFGLVMIEAMACGTPVIATRFGSVPEVMADRRSGFIVDSVEEAVEAVEKVGSLSRAGVRQVF EERFSVERMVSDYEALYRQLVNERQEMSRRRQLNKA
Sequences:
>Translated_356_residues MRIAQIAPLHESVPPKLYGGTERVVSWLTEELVRRGHEVTLFASGDSQTQARLIPFRERALRLDPTAIDTVAPHILMVEK AFQMADEFDIIHGHIDYYPYALARRHPQVSFLATLHGRLDIPELQPLYTEFQDIPVVSISNAQRLPLPQARWVGTVYHGL PLDLHRFYPEKGDYLAFLGRVSPEKGLDTAIEIAARAGMPLKAAIKIDAVDRQYYELEIKPLASRHPNVEIIGEITDQEK SEFLGKAYAVLFPIRWPEPFGLVMIEAMACGTPVIATRFGSVPEVMADRRSGFIVDSVEEAVEAVEKVGSLSRAGVRQVF EERFSVERMVSDYEALYRQLVNERQEMSRRRQLNKA >Mature_356_residues MRIAQIAPLHESVPPKLYGGTERVVSWLTEELVRRGHEVTLFASGDSQTQARLIPFRERALRLDPTAIDTVAPHILMVEK AFQMADEFDIIHGHIDYYPYALARRHPQVSFLATLHGRLDIPELQPLYTEFQDIPVVSISNAQRLPLPQARWVGTVYHGL PLDLHRFYPEKGDYLAFLGRVSPEKGLDTAIEIAARAGMPLKAAIKIDAVDRQYYELEIKPLASRHPNVEIIGEITDQEK SEFLGKAYAVLFPIRWPEPFGLVMIEAMACGTPVIATRFGSVPEVMADRRSGFIVDSVEEAVEAVEKVGSLSRAGVRQVF EERFSVERMVSDYEALYRQLVNERQEMSRRRQLNKA
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 40361; Mature: 40361
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAQIAPLHESVPPKLYGGTERVVSWLTEELVRRGHEVTLFASGDSQTQARLIPFRERA CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHEECCHHHHH LRLDPTAIDTVAPHILMVEKAFQMADEFDIIHGHIDYYPYALARRHPQVSFLATLHGRLD EECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCEEEEECCCCCC IPELQPLYTEFQDIPVVSISNAQRLPLPQARWVGTVYHGLPLDLHRFYPEKGDYLAFLGR CCCCCHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEC VSPEKGLDTAIEIAARAGMPLKAAIKIDAVDRQYYELEIKPLASRHPNVEIIGEITDQEK CCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCEEEEEECCCHHH SEFLGKAYAVLFPIRWPEPFGLVMIEAMACGTPVIATRFGSVPEVMADRRSGFIVDSVEE HHHHHHHEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHCCCCHHHHHHCCCCCCHHHHHH AVEAVEKVGSLSRAGVRQVFEERFSVERMVSDYEALYRQLVNERQEMSRRRQLNKA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRIAQIAPLHESVPPKLYGGTERVVSWLTEELVRRGHEVTLFASGDSQTQARLIPFRERA CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHEECCHHHHH LRLDPTAIDTVAPHILMVEKAFQMADEFDIIHGHIDYYPYALARRHPQVSFLATLHGRLD EECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCEEEEECCCCCC IPELQPLYTEFQDIPVVSISNAQRLPLPQARWVGTVYHGLPLDLHRFYPEKGDYLAFLGR CCCCCHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEC VSPEKGLDTAIEIAARAGMPLKAAIKIDAVDRQYYELEIKPLASRHPNVEIIGEITDQEK CCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCEEEEEECCCHHH SEFLGKAYAVLFPIRWPEPFGLVMIEAMACGTPVIATRFGSVPEVMADRRSGFIVDSVEE HHHHHHHEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHCCCCHHHHHHCCCCCCHHHHHH AVEAVEKVGSLSRAGVRQVFEERFSVERMVSDYEALYRQLVNERQEMSRRRQLNKA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]