Click here to switch to the map view.

The map label for this gene is 86608269

Identifier: 86608269

GI number: 86608269

Start: 809623

End: 811788

Strand: Reverse

Name: 86608269

Synonym: CYB_0785

Alternate gene names: NA

Gene position: 811788-809623 (Counterclockwise)

Preceding gene: 86608270

Following gene: 86608265

Centisome position: 26.64

GC content: 60.71

Gene sequence:

>2166_bases
ATGGCAGAAGACATCATCCAAATTCAAGATCAGTACTACATCCGGGCCAGCGCCTCTTGGGTGGAGGCACGCTCTCATGT
TCTCAAGCATGACAACTGCTTTGCCATCTTTGACCGGCGAGGGAACATGCGCCCCCTCGGCATCCGGGATCATGGCCTCT
TCCGGGACGACACCCGCTTTTTGTCCCGCTGGGTGTTGGACTTGCAGGGAAAGCAGTTCCTGCTGCTCAGCTCAGAGGTG
CGGGAAGACAAAGATATTTTGGCGGTGGATCTGACCAACCCGGAGTTCACCACCTCAGAGGGGCAGTTTATCGGTCAAGA
TACCCTGCATGTTCTACGGACTACTTTTCTGTGGAACAACGTAGCCTACGAGCGCATTCGCATTCACAACTACGGCTCGG
AGCCGTTTCGCGTGCCGATTACCCTGCGCTTTGAGGCGGACTTTGCCGATATTTTTGAGATCCGGGGCATCCGACGGGCC
CAGCGGGGTCAAGTGCTGCCGGCCCAGGTGAACCCTGAGGGAGTGGTTCTCCGCTACCGCGGCTTGGATGGAGTGGAGCG
GCAAACCCAGTTGCAATTTTTGCCGGCGCCGGAGCTAGTGTCGGAGAAGCTGGCGCAGTGGTGGGTGCCTTTGGCCCCGC
AGGAGGAACGGGATTTGGAGCTGAGGGTGATCTGCAGCTACGGCGGGGAGGAGATCGCCCCTTTGACCTACCAGGAGGCT
CTGCAGGCGGAGCGGGAGCAAAGGGCTTCCTTGCGGGCGCAAGCCCACCGGATCGACACCGGCAATGCTCAGTTTAACGA
TTGGCTCAACGCCTCACGGGATGATCTGCTGATGATGCTCACCCGCACTCCCTACGGGCTTTATCCCTATGCGGGGGTGC
CTTGGTTTACCACGGTCTTCGGGCGCGATGCCCTGATCACCGCCCTGGCCACTCTCTGGTGGTTTCCAGACTTGGCGCGG
GGGGTGCTGCTGTATCTGGCGGCCCACCAGGCCCAGGAGGTGGATCCCAGCCGCGATGCCGAGCCTGGCAAGATCCTGCA
TGAGCAGCGCTCCAGCGAGATGGCCAAGACGCGCGAGATCCCCTTTGGCAATTATTTCGGCAGCATTGACTCCACCCCTT
TGTTTGTGGTGCTAGCAGGGCGCTACGTGCGCCGCAGCGGCGATCTAGAGCTGTTGCGGCAGCTCTGGCCAAACATCGAA
GCAGCCCTGCACTGGATGGACACTTACGGGGATGCGGACGGGGACGGCTTTTTGGAGTATGCCGGCAAGGCGCGGCGGGG
CCTGCGCAACCAGGGCTGGAAAGATTCTGAAGATGCCATCTTCTACCCGGACGGATCCCTGGCAGAACCCCCCTTGGCCC
TGTGCGAGGTGCAGGGCTATGCCTACGAAGCTAAGCAGTTGGCAGCAGAGATGGCCGAGCTGCTGGGGCGGCAAGAGCAA
GCAGCCCAGTTGCGACAACAAGCGGAAAAGCTGCAGCAGCAGTTTTGGGATCACTTCTGGTGCGAAGAGTTGGGGGGCTA
TGCCCTGGCTTTGGATGGCCAGAAGCAACCCTGCCGGGTGCGCAGCTCCAACATGGGCCACTGTCTGTTTTCGGGGATTG
CCCATCCCGAGCATGCTGCCTGCATTGCCCGGCAACTGCTGGAGCCAGCTTTCTTCAGCGGCTGGGGGATCCGCACAGTG
CCGGAGGGAGAGGGGCGCTACAACCCCATGTCCTACCACAATGGCTCCATCTGGCCCCACGACAATGCCTTGATTGCCGC
AGGCTTATCTCGCTATGGCTTCAAGGGCGAAGCGGTGCGGGTCTTGACAGCGCTGTTCGATGCCAGCCAGTTTCTGGAGC
TGAAGCGGCTGCCTGAGCTGTTTTGTGGCTTTCGGCGGCGACAGCGGGAGGGCCCCACCCTTTATCCGGTGGCCTGTCTG
CCCCAGTCTTGGGCGGCGGCCAGTGTGTTTTTGCTGCTGCAGGCTTGTCTGGGGCTGGAGATCGACGGGCTGGCTCAACG
GGTACATTTAACCAAGCCCACTCTGCCCCTGTGGCTGCCCCATGTCATTCTTGAGAATGTGCAGGTGGGCCAGGGATCCC
TGGACATCGGCCTCTATTTACAAGCGGGGGGAGTGGGGATCAACATTCTCAGGAGTGCGGGGGACGTGGAGTTGACGGTG
AAATAG

Upstream 100 bases:

>100_bases
TGCATCGGGGGGCCCCTGCTTCTTCGCCTTCTTTGAGTGGACCGATAGCAGTAAGCTGTTCGCGTAGGAGACCGGCTGGA
TAGGGATCGAGAAGACCGAG

Downstream 100 bases:

>100_bases
TTGCAAAATTCAAGACATCCGCAACCCAACCTACAACTAAGTTTCACCTGCCAAATGTGGCGATAGGGACACAACTCAAC
AGTTCAGACAGCCTCTCCCT

Product: glycogen debranching enzyme family protein

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 721; Mature: 720

Protein sequence:

>721_residues
MAEDIIQIQDQYYIRASASWVEARSHVLKHDNCFAIFDRRGNMRPLGIRDHGLFRDDTRFLSRWVLDLQGKQFLLLSSEV
REDKDILAVDLTNPEFTTSEGQFIGQDTLHVLRTTFLWNNVAYERIRIHNYGSEPFRVPITLRFEADFADIFEIRGIRRA
QRGQVLPAQVNPEGVVLRYRGLDGVERQTQLQFLPAPELVSEKLAQWWVPLAPQEERDLELRVICSYGGEEIAPLTYQEA
LQAEREQRASLRAQAHRIDTGNAQFNDWLNASRDDLLMMLTRTPYGLYPYAGVPWFTTVFGRDALITALATLWWFPDLAR
GVLLYLAAHQAQEVDPSRDAEPGKILHEQRSSEMAKTREIPFGNYFGSIDSTPLFVVLAGRYVRRSGDLELLRQLWPNIE
AALHWMDTYGDADGDGFLEYAGKARRGLRNQGWKDSEDAIFYPDGSLAEPPLALCEVQGYAYEAKQLAAEMAELLGRQEQ
AAQLRQQAEKLQQQFWDHFWCEELGGYALALDGQKQPCRVRSSNMGHCLFSGIAHPEHAACIARQLLEPAFFSGWGIRTV
PEGEGRYNPMSYHNGSIWPHDNALIAAGLSRYGFKGEAVRVLTALFDASQFLELKRLPELFCGFRRRQREGPTLYPVACL
PQSWAAASVFLLLQACLGLEIDGLAQRVHLTKPTLPLWLPHVILENVQVGQGSLDIGLYLQAGGVGINILRSAGDVELTV
K

Sequences:

>Translated_721_residues
MAEDIIQIQDQYYIRASASWVEARSHVLKHDNCFAIFDRRGNMRPLGIRDHGLFRDDTRFLSRWVLDLQGKQFLLLSSEV
REDKDILAVDLTNPEFTTSEGQFIGQDTLHVLRTTFLWNNVAYERIRIHNYGSEPFRVPITLRFEADFADIFEIRGIRRA
QRGQVLPAQVNPEGVVLRYRGLDGVERQTQLQFLPAPELVSEKLAQWWVPLAPQEERDLELRVICSYGGEEIAPLTYQEA
LQAEREQRASLRAQAHRIDTGNAQFNDWLNASRDDLLMMLTRTPYGLYPYAGVPWFTTVFGRDALITALATLWWFPDLAR
GVLLYLAAHQAQEVDPSRDAEPGKILHEQRSSEMAKTREIPFGNYFGSIDSTPLFVVLAGRYVRRSGDLELLRQLWPNIE
AALHWMDTYGDADGDGFLEYAGKARRGLRNQGWKDSEDAIFYPDGSLAEPPLALCEVQGYAYEAKQLAAEMAELLGRQEQ
AAQLRQQAEKLQQQFWDHFWCEELGGYALALDGQKQPCRVRSSNMGHCLFSGIAHPEHAACIARQLLEPAFFSGWGIRTV
PEGEGRYNPMSYHNGSIWPHDNALIAAGLSRYGFKGEAVRVLTALFDASQFLELKRLPELFCGFRRRQREGPTLYPVACL
PQSWAAASVFLLLQACLGLEIDGLAQRVHLTKPTLPLWLPHVILENVQVGQGSLDIGLYLQAGGVGINILRSAGDVELTV
K
>Mature_720_residues
AEDIIQIQDQYYIRASASWVEARSHVLKHDNCFAIFDRRGNMRPLGIRDHGLFRDDTRFLSRWVLDLQGKQFLLLSSEVR
EDKDILAVDLTNPEFTTSEGQFIGQDTLHVLRTTFLWNNVAYERIRIHNYGSEPFRVPITLRFEADFADIFEIRGIRRAQ
RGQVLPAQVNPEGVVLRYRGLDGVERQTQLQFLPAPELVSEKLAQWWVPLAPQEERDLELRVICSYGGEEIAPLTYQEAL
QAEREQRASLRAQAHRIDTGNAQFNDWLNASRDDLLMMLTRTPYGLYPYAGVPWFTTVFGRDALITALATLWWFPDLARG
VLLYLAAHQAQEVDPSRDAEPGKILHEQRSSEMAKTREIPFGNYFGSIDSTPLFVVLAGRYVRRSGDLELLRQLWPNIEA
ALHWMDTYGDADGDGFLEYAGKARRGLRNQGWKDSEDAIFYPDGSLAEPPLALCEVQGYAYEAKQLAAEMAELLGRQEQA
AQLRQQAEKLQQQFWDHFWCEELGGYALALDGQKQPCRVRSSNMGHCLFSGIAHPEHAACIARQLLEPAFFSGWGIRTVP
EGEGRYNPMSYHNGSIWPHDNALIAAGLSRYGFKGEAVRVLTALFDASQFLELKRLPELFCGFRRRQREGPTLYPVACLP
QSWAAASVFLLLQACLGLEIDGLAQRVHLTKPTLPLWLPHVILENVQVGQGSLDIGLYLQAGGVGINILRSAGDVELTVK

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81645; Mature: 81513

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEDIIQIQDQYYIRASASWVEARSHVLKHDNCFAIFDRRGNMRPLGIRDHGLFRDDTRF
CCCCHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH
LSRWVLDLQGKQFLLLSSEVREDKDILAVDLTNPEFTTSEGQFIGQDTLHVLRTTFLWNN
HHHHHHHCCCCEEEEEEHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC
VAYERIRIHNYGSEPFRVPITLRFEADFADIFEIRGIRRAQRGQVLPAQVNPEGVVLRYR
CCEEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEC
GLDGVERQTQLQFLPAPELVSEKLAQWWVPLAPQEERDLELRVICSYGGEEIAPLTYQEA
CCCCCCCHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHH
LQAEREQRASLRAQAHRIDTGNAQFNDWLNASRDDLLMMLTRTPYGLYPYAGVPWFTTVF
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
GRDALITALATLWWFPDLARGVLLYLAAHQAQEVDPSRDAEPGKILHEQRSSEMAKTREI
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PFGNYFGSIDSTPLFVVLAGRYVRRSGDLELLRQLWPNIEAALHWMDTYGDADGDGFLEY
CCCCCCCCCCCCCEEEEECCHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHH
AGKARRGLRNQGWKDSEDAIFYPDGSLAEPPLALCEVQGYAYEAKQLAAEMAELLGRQEQ
HHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHCCHHH
AAQLRQQAEKLQQQFWDHFWCEELGGYALALDGQKQPCRVRSSNMGHCLFSGIAHPEHAA
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCCCCCHHHHHCCCCCHHHH
CIARQLLEPAFFSGWGIRTVPEGEGRYNPMSYHNGSIWPHDNALIAAGLSRYGFKGEAVR
HHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCHHHH
VLTALFDASQFLELKRLPELFCGFRRRQREGPTLYPVACLPQSWAAASVFLLLQACLGLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
IDGLAQRVHLTKPTLPLWLPHVILENVQVGQGSLDIGLYLQAGGVGINILRSAGDVELTV
CHHHHHHEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEEECCCCEEEEE
K
C
>Mature Secondary Structure 
AEDIIQIQDQYYIRASASWVEARSHVLKHDNCFAIFDRRGNMRPLGIRDHGLFRDDTRF
CCCHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH
LSRWVLDLQGKQFLLLSSEVREDKDILAVDLTNPEFTTSEGQFIGQDTLHVLRTTFLWNN
HHHHHHHCCCCEEEEEEHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC
VAYERIRIHNYGSEPFRVPITLRFEADFADIFEIRGIRRAQRGQVLPAQVNPEGVVLRYR
CCEEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEC
GLDGVERQTQLQFLPAPELVSEKLAQWWVPLAPQEERDLELRVICSYGGEEIAPLTYQEA
CCCCCCCHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHH
LQAEREQRASLRAQAHRIDTGNAQFNDWLNASRDDLLMMLTRTPYGLYPYAGVPWFTTVF
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
GRDALITALATLWWFPDLARGVLLYLAAHQAQEVDPSRDAEPGKILHEQRSSEMAKTREI
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PFGNYFGSIDSTPLFVVLAGRYVRRSGDLELLRQLWPNIEAALHWMDTYGDADGDGFLEY
CCCCCCCCCCCCCEEEEECCHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHH
AGKARRGLRNQGWKDSEDAIFYPDGSLAEPPLALCEVQGYAYEAKQLAAEMAELLGRQEQ
HHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHCCHHH
AAQLRQQAEKLQQQFWDHFWCEELGGYALALDGQKQPCRVRSSNMGHCLFSGIAHPEHAA
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCCCCCHHHHHCCCCCHHHH
CIARQLLEPAFFSGWGIRTVPEGEGRYNPMSYHNGSIWPHDNALIAAGLSRYGFKGEAVR
HHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCHHHH
VLTALFDASQFLELKRLPELFCGFRRRQREGPTLYPVACLPQSWAAASVFLLLQACLGLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
IDGLAQRVHLTKPTLPLWLPHVILENVQVGQGSLDIGLYLQAGGVGINILRSAGDVELTV
CHHHHHHEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEEECCCCEEEEE
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA