Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608253

Identifier: 86608253

GI number: 86608253

Start: 791275

End: 791643

Strand: Reverse

Name: 86608253

Synonym: CYB_0768

Alternate gene names: NA

Gene position: 791643-791275 (Counterclockwise)

Preceding gene: 86608254

Following gene: 86608251

Centisome position: 25.98

GC content: 60.7

Gene sequence:

>369_bases
ATGAAACAGCGACTCGGCCTACCTTTCCCCAAGGGATCCCTGGTGTTCTTGCTGTGTTTGAGCCTGGCCCTAGCAGGGTG
TGGGCCACTGGCGCGTCTGGGCATCGGCACAACCCCCATCGCCCAGATCGAACAAAATCCCTCCCGCTACACCAATGTGT
ATATCCGCGGTCGCGTGGTGAACCAGATAGGAGTGTTCGGCCAGGGCGTGTATGAGATCCAAGACAACAGCGGCTCCCTC
TGGGTCATCACCGACAAGGGCCTACCGGCCATGAACAGCACTGTAACCGTGCGCGGCAAGGCCCAAGAGGGGATTGTGGT
GGGGGGACGCAGCTTCGGGGTCTCGTTGGTGGAAGCCGAGCGCTTCTAG

Upstream 100 bases:

>100_bases
GCCAACTGCACTTCGGCATTGGCGAGAAGTTCTAACTTGGCCGTGGATTTCCCTGCCGGCTTGCTATGGTGGGAGCAGGT
GCTCGTAATGGAAGCAACCC

Downstream 100 bases:

>100_bases
CCTGCCCCCAAAGCCAGCATCGAAACACGGCCTGCCAAGGTTTTGGCAATTTGCCGAAGCGCCTGGGCCGAGGCTGACTC
AGGCTGGCTGATGACGATGG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKQRLGLPFPKGSLVFLLCLSLALAGCGPLARLGIGTTPIAQIEQNPSRYTNVYIRGRVVNQIGVFGQGVYEIQDNSGSL
WVITDKGLPAMNSTVTVRGKAQEGIVVGGRSFGVSLVEAERF

Sequences:

>Translated_122_residues
MKQRLGLPFPKGSLVFLLCLSLALAGCGPLARLGIGTTPIAQIEQNPSRYTNVYIRGRVVNQIGVFGQGVYEIQDNSGSL
WVITDKGLPAMNSTVTVRGKAQEGIVVGGRSFGVSLVEAERF
>Mature_122_residues
MKQRLGLPFPKGSLVFLLCLSLALAGCGPLARLGIGTTPIAQIEQNPSRYTNVYIRGRVVNQIGVFGQGVYEIQDNSGSL
WVITDKGLPAMNSTVTVRGKAQEGIVVGGRSFGVSLVEAERF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13022; Mature: 13022

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRLGLPFPKGSLVFLLCLSLALAGCGPLARLGIGTTPIAQIEQNPSRYTNVYIRGRVV
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCHHEECCCCCCEEEEEEEEEEE
NQIGVFGQGVYEIQDNSGSLWVITDKGLPAMNSTVTVRGKAQEGIVVGGRSFGVSLVEAE
EECCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCEEECCCCCCEEEEEEC
RF
CC
>Mature Secondary Structure
MKQRLGLPFPKGSLVFLLCLSLALAGCGPLARLGIGTTPIAQIEQNPSRYTNVYIRGRVV
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCHHEECCCCCCEEEEEEEEEEE
NQIGVFGQGVYEIQDNSGSLWVITDKGLPAMNSTVTVRGKAQEGIVVGGRSFGVSLVEAE
EECCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCEEECCCCCCEEEEEEC
RF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA