Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608251
Identifier: 86608251
GI number: 86608251
Start: 789735
End: 790004
Strand: Reverse
Name: 86608251
Synonym: CYB_0767
Alternate gene names: NA
Gene position: 790004-789735 (Counterclockwise)
Preceding gene: 86608253
Following gene: 86608250
Centisome position: 25.93
GC content: 60.74
Gene sequence:
>270_bases GTGGGAGTTGGCTTGTGGTTGGGGCTAACGTTCTGGGCTCAGTTGATCCCTCTGCTGGAAAAGAGGGGATCCCGCCGCCT CTCAATCGGGGACGAGCGCCGGGCCATGCCAACTCTCTTTTCTGACTCGGCCTGGGATCCCTTCTGCCGTTACTTTTCTC GGTCACCCTACCTGCCTTGTGCGGTGAGTCCTCTGGGCCCCTGCCGCTGCCCCCACCACGCTGCGCGTCCAAAAGATGCT GCCTGGGCGTTCTGTCCACAACAAGAATAA
Upstream 100 bases:
>100_bases GCTGCCACGCTAGTCCTGGGCAAGCAGGCTGGCCGAGGCTGATTCTGGTTGGAAGACAACGCTGTTGGCCGACGGGGGAG GGCAATTGTGCAAGCGCTGA
Downstream 100 bases:
>100_bases ACTGTGGTCTGTTCTCGTGCCGGTATCTCAGGAAATTCAAGGAATTGGTTGTGAAGCCAGGCAAAAGTATGGAAATCCGT CCTGCCACCGCCTTAGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MGVGLWLGLTFWAQLIPLLEKRGSRRLSIGDERRAMPTLFSDSAWDPFCRYFSRSPYLPCAVSPLGPCRCPHHAARPKDA AWAFCPQQE
Sequences:
>Translated_89_residues MGVGLWLGLTFWAQLIPLLEKRGSRRLSIGDERRAMPTLFSDSAWDPFCRYFSRSPYLPCAVSPLGPCRCPHHAARPKDA AWAFCPQQE >Mature_88_residues GVGLWLGLTFWAQLIPLLEKRGSRRLSIGDERRAMPTLFSDSAWDPFCRYFSRSPYLPCAVSPLGPCRCPHHAARPKDAA WAFCPQQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10093; Mature: 9962
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVGLWLGLTFWAQLIPLLEKRGSRRLSIGDERRAMPTLFSDSAWDPFCRYFSRSPYLPC CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCE AVSPLGPCRCPHHAARPKDAAWAFCPQQE ECCCCCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure GVGLWLGLTFWAQLIPLLEKRGSRRLSIGDERRAMPTLFSDSAWDPFCRYFSRSPYLPC CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCE AVSPLGPCRCPHHAARPKDAAWAFCPQQE ECCCCCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA