Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608242

Identifier: 86608242

GI number: 86608242

Start: 779825

End: 780937

Strand: Reverse

Name: 86608242

Synonym: CYB_0758

Alternate gene names: NA

Gene position: 780937-779825 (Counterclockwise)

Preceding gene: 86608243

Following gene: 86608241

Centisome position: 25.63

GC content: 57.77

Gene sequence:

>1113_bases
ATGCTTAGGCCCAGTCTTCTGTTCTCCGGCTCGGCTTTGTTGGGTTTGCTGTCCTTGCCGTTTTTGATCGGCGAATGTGG
CTGGTTGGCCTCGTCTCGGAAAGGGCGGAGTGCGGCCACTGAGGTTTCTCTGCAAGCTTGGGAGCACTCTCTGCCGTCAT
CCCAGACCTTGTTTGAAGATGAACCAGGTTCTGAATCTTGGCTCAGGCGGCAAGCCCAACTGCAAGAACGGGTACAACAG
CTTGAGCAGCGATCTCTCGCTCACCAGCAGCAGGTCTATCAATGGCTTGCGCAACAGGCAGATCCCCAGCCCGCGGGGGT
TGTTGGCCGTTCCAACCCAAGCCTTGCCGTGCCGGCACGGCCTCGGCGTCAGGATTCCACTCTCTCTCAATCCTCTGCTC
CGGCGGATCTTCCCAATGAGCTGGCGCTGCTAACCCAGTCCATCCAACAGGAGCCGGGAAATGCGCAGCTTTATCTGCAA
CGGGCGCAATACTTCTGGCGTCAGTCTCAGGAGGATCCTGCTGCTTTACCGCAGCCGGAGCATGCTTCTGCCATTGCTTA
CCTGATGCGCTCCGCTCTGCGGGATCTGGATATTGCTATTGCTTTGGATCCCTATCTGGCTGAAGCCTATTTGCTCAAGG
CCAAAATCCAACACGAGCGTTTGCAAGAACCTGAGCAGGCTCTGGCAACCTTGTCTCCTCTGGATCGGATTGCCTATCAC
AACCCGCAACTGCACTTGATCCGCTCTCGCATCTGGGCCGAACAAGGCCATCTGGAATCGGCGTTTGATGTGTCGCATCT
GGCGATTGAGCTGGCCAAGCAAAATCAAAGTGCTGCCGATCTTTTCGAGGCCTATGTCCATCGCGGCCTGATGTGGGCCA
GCATCTGCGACTTCAATTTGGCCGTTCAGGATTTCAGCCGGGCTATCGAGGTGCAGCCCCAGCGGGCTGAAGGTTACTAC
CACCGCGGTATGGCGCGCGCTTACCAGGGAGAGGATAGGGCTGGTGCCGCTTCCGATTTGGGTAGCGCTTTGATGTTGTG
GCGGGCTTCCGGCACGGGATCCCCGGGGCTGCTGGAATATGTAGAAGCGGTGCGGAGGGAACTGTTGCGGTAG

Upstream 100 bases:

>100_bases
GGCTCAGGGCAAGCATCGCCGAAACTCTGGACACTGCGGCTGCGGCGAACTAGTTTAGAGGCAACTCTTTACTTCTAAGC
TATTTCAAGGGGTGGGATCC

Downstream 100 bases:

>100_bases
CTCAGCTCTGGCGGGGTTTTTGCTGAAGATCTGAAGCGCTGGGTTTGGGGTCTTTGCCCAGGAGCATTTGGCAAGTTCGT
CCAAGCCAGGCCAGGATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MLRPSLLFSGSALLGLLSLPFLIGECGWLASSRKGRSAATEVSLQAWEHSLPSSQTLFEDEPGSESWLRRQAQLQERVQQ
LEQRSLAHQQQVYQWLAQQADPQPAGVVGRSNPSLAVPARPRRQDSTLSQSSAPADLPNELALLTQSIQQEPGNAQLYLQ
RAQYFWRQSQEDPAALPQPEHASAIAYLMRSALRDLDIAIALDPYLAEAYLLKAKIQHERLQEPEQALATLSPLDRIAYH
NPQLHLIRSRIWAEQGHLESAFDVSHLAIELAKQNQSAADLFEAYVHRGLMWASICDFNLAVQDFSRAIEVQPQRAEGYY
HRGMARAYQGEDRAGAASDLGSALMLWRASGTGSPGLLEYVEAVRRELLR

Sequences:

>Translated_370_residues
MLRPSLLFSGSALLGLLSLPFLIGECGWLASSRKGRSAATEVSLQAWEHSLPSSQTLFEDEPGSESWLRRQAQLQERVQQ
LEQRSLAHQQQVYQWLAQQADPQPAGVVGRSNPSLAVPARPRRQDSTLSQSSAPADLPNELALLTQSIQQEPGNAQLYLQ
RAQYFWRQSQEDPAALPQPEHASAIAYLMRSALRDLDIAIALDPYLAEAYLLKAKIQHERLQEPEQALATLSPLDRIAYH
NPQLHLIRSRIWAEQGHLESAFDVSHLAIELAKQNQSAADLFEAYVHRGLMWASICDFNLAVQDFSRAIEVQPQRAEGYY
HRGMARAYQGEDRAGAASDLGSALMLWRASGTGSPGLLEYVEAVRRELLR
>Mature_370_residues
MLRPSLLFSGSALLGLLSLPFLIGECGWLASSRKGRSAATEVSLQAWEHSLPSSQTLFEDEPGSESWLRRQAQLQERVQQ
LEQRSLAHQQQVYQWLAQQADPQPAGVVGRSNPSLAVPARPRRQDSTLSQSSAPADLPNELALLTQSIQQEPGNAQLYLQ
RAQYFWRQSQEDPAALPQPEHASAIAYLMRSALRDLDIAIALDPYLAEAYLLKAKIQHERLQEPEQALATLSPLDRIAYH
NPQLHLIRSRIWAEQGHLESAFDVSHLAIELAKQNQSAADLFEAYVHRGLMWASICDFNLAVQDFSRAIEVQPQRAEGYY
HRGMARAYQGEDRAGAASDLGSALMLWRASGTGSPGLLEYVEAVRRELLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41305; Mature: 41305

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPSLLFSGSALLGLLSLPFLIGECGWLASSRKGRSAATEVSLQAWEHSLPSSQTLFED
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
EPGSESWLRRQAQLQERVQQLEQRSLAHQQQVYQWLAQQADPQPAGVVGRSNPSLAVPAR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCC
PRRQDSTLSQSSAPADLPNELALLTQSIQQEPGNAQLYLQRAQYFWRQSQEDPAALPQPE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
HASAIAYLMRSALRDLDIAIALDPYLAEAYLLKAKIQHERLQEPEQALATLSPLDRIAYH
HHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
NPQLHLIRSRIWAEQGHLESAFDVSHLAIELAKQNQSAADLFEAYVHRGLMWASICDFNL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHH
AVQDFSRAIEVQPQRAEGYYHRGMARAYQGEDRAGAASDLGSALMLWRASGTGSPGLLEY
HHHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCCCCCCHHHHH
VEAVRRELLR
HHHHHHHHCC
>Mature Secondary Structure
MLRPSLLFSGSALLGLLSLPFLIGECGWLASSRKGRSAATEVSLQAWEHSLPSSQTLFED
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
EPGSESWLRRQAQLQERVQQLEQRSLAHQQQVYQWLAQQADPQPAGVVGRSNPSLAVPAR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCC
PRRQDSTLSQSSAPADLPNELALLTQSIQQEPGNAQLYLQRAQYFWRQSQEDPAALPQPE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
HASAIAYLMRSALRDLDIAIALDPYLAEAYLLKAKIQHERLQEPEQALATLSPLDRIAYH
HHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
NPQLHLIRSRIWAEQGHLESAFDVSHLAIELAKQNQSAADLFEAYVHRGLMWASICDFNL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHH
AVQDFSRAIEVQPQRAEGYYHRGMARAYQGEDRAGAASDLGSALMLWRASGTGSPGLLEY
HHHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCCCCCCHHHHH
VEAVRRELLR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA