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The map label for this gene is yiaD [H]

Identifier: 86608243

GI number: 86608243

Start: 781057

End: 782130

Strand: Reverse

Name: yiaD [H]

Synonym: CYB_0759

Alternate gene names: 86608243

Gene position: 782130-781057 (Counterclockwise)

Preceding gene: 86608245

Following gene: 86608242

Centisome position: 25.67

GC content: 59.4

Gene sequence:

>1074_bases
ATGTCTTTTCGCGCAGATTTACAGCGTTTTGCCTTCGCTGTGCTAACAGCGCTGCTTGTCCAGGCGGGGCCGGCTCGGGC
CGATCTGCCCGGAACGGCGGATCCTCCGGGGCTCAAGCGCTTTGCAGGATCCAGCATTGTGTTTCAATCGCAGGCCGACT
ACGACCGCTTTAAGTTAGCCCTTGAAAAAATCGTCTTCAGTGGCGCGATGGGAGCTGTGCAGCCGTACCGGTCTCAAACT
GTCGAAGGGCGTCGCATCACGACCTATTACCGACTGCCGGAGCGGGTTGCCCCTCTTGAGGCGCTGCTCAACTACGAAAC
CGAACTGAAAGAGTCCGGCTTTGAGATCCTCTTCTCCGGCTTGGGGGAGGAGATTGAGACCCTTGGCTACAACAACCAGA
TTGCTCACGAGATCCTCAATATGAAGGGCACCTACAGCACGCCGGAAGAACGGGCCCAGTGGCCGTTTCAGAACGCCAGA
GAAAACACTGCTGCCTATTTAGCCGCACGTGGCAAGTCCCCCGAAGGCGATGAGCGATTCGTGAGCGCCTACTTTGTGGT
CAATACCGATGACTGGGAGATCACCCGCGGCAGTGGGCAGATCCCGACCGGGATTACTCTGGGGCGAGTGGATGTCGTCG
ATGTCAAGCCCCGCCAGCAACGCCTGGAGCTGGTTGAAAGCATCACAAGCGGCGAGATCAATCAAGCCATCAGCCGCGAT
GGCCGGATCGCCCTCTACGGCATTCTCTTTGCCTATGACTCGGATCAGATTGAAGCGGCTGCCGAGCCCACCCTTGCCGA
GATCGCCAAGCTGATGCGCGAGCGCACCGACCTCAGCATCCTCGTGGTCGGTCATACCGATGCAACCGGTAGCTTCGACT
ACAACCTAGGTCTCTCGCGGCGCCGGGCCGAGGCGGTTGTCAACCGGTTGGTTCAGCTGGGTATCGAGCAACGTCGACTC
TATCCGGTTGGTGTGGGGTTCTCTGCTCCTGTGGCCAGCAACACCACTGAGGAAGGCCGGGCGAAGAATCGCCGCGTGGA
GTTGGTGGATCTGGCGGGTGGCAGAATCCCCTAG

Upstream 100 bases:

>100_bases
ACACACTAAAAGAAAGGTTTGCCCTTAATCCCTTTGCATTTCTGAGCTAAGCTTCTAGGCATTGGCCCCGTAAAGATTTT
GGAAAAACTAGGGAGTGGCT

Downstream 100 bases:

>100_bases
GGGAGAGTTTCTGAGTTTTGGCTCAGGGCAAGCATCGCCGAAACTCTGGACACTGCGGCTGCGGCGAACTAGTTTAGAGG
CAACTCTTTACTTCTAAGCT

Product: OmpA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSFRADLQRFAFAVLTALLVQAGPARADLPGTADPPGLKRFAGSSIVFQSQADYDRFKLALEKIVFSGAMGAVQPYRSQT
VEGRRITTYYRLPERVAPLEALLNYETELKESGFEILFSGLGEEIETLGYNNQIAHEILNMKGTYSTPEERAQWPFQNAR
ENTAAYLAARGKSPEGDERFVSAYFVVNTDDWEITRGSGQIPTGITLGRVDVVDVKPRQQRLELVESITSGEINQAISRD
GRIALYGILFAYDSDQIEAAAEPTLAEIAKLMRERTDLSILVVGHTDATGSFDYNLGLSRRRAEAVVNRLVQLGIEQRRL
YPVGVGFSAPVASNTTEEGRAKNRRVELVDLAGGRIP

Sequences:

>Translated_357_residues
MSFRADLQRFAFAVLTALLVQAGPARADLPGTADPPGLKRFAGSSIVFQSQADYDRFKLALEKIVFSGAMGAVQPYRSQT
VEGRRITTYYRLPERVAPLEALLNYETELKESGFEILFSGLGEEIETLGYNNQIAHEILNMKGTYSTPEERAQWPFQNAR
ENTAAYLAARGKSPEGDERFVSAYFVVNTDDWEITRGSGQIPTGITLGRVDVVDVKPRQQRLELVESITSGEINQAISRD
GRIALYGILFAYDSDQIEAAAEPTLAEIAKLMRERTDLSILVVGHTDATGSFDYNLGLSRRRAEAVVNRLVQLGIEQRRL
YPVGVGFSAPVASNTTEEGRAKNRRVELVDLAGGRIP
>Mature_356_residues
SFRADLQRFAFAVLTALLVQAGPARADLPGTADPPGLKRFAGSSIVFQSQADYDRFKLALEKIVFSGAMGAVQPYRSQTV
EGRRITTYYRLPERVAPLEALLNYETELKESGFEILFSGLGEEIETLGYNNQIAHEILNMKGTYSTPEERAQWPFQNARE
NTAAYLAARGKSPEGDERFVSAYFVVNTDDWEITRGSGQIPTGITLGRVDVVDVKPRQQRLELVESITSGEINQAISRDG
RIALYGILFAYDSDQIEAAAEPTLAEIAKLMRERTDLSILVVGHTDATGSFDYNLGLSRRRAEAVVNRLVQLGIEQRRLY
PVGVGFSAPVASNTTEEGRAKNRRVELVDLAGGRIP

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential). Cell inner membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=101, Percent_Identity=37.6237623762376, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 39427; Mature: 39296

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRADLQRFAFAVLTALLVQAGPARADLPGTADPPGLKRFAGSSIVFQSQADYDRFKLA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCHHHHHHH
LEKIVFSGAMGAVQPYRSQTVEGRRITTYYRLPERVAPLEALLNYETELKESGFEILFSG
HHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHCCHHHHHHH
LGEEIETLGYNNQIAHEILNMKGTYSTPEERAQWPFQNARENTAAYLAARGKSPEGDERF
HCHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHEEEEECCCCCCCCCEE
VSAYFVVNTDDWEITRGSGQIPTGITLGRVDVVDVKPRQQRLELVESITSGEINQAISRD
EEEEEEEECCCCEEECCCCCCCCCEEECCEEEEECCCHHHHHHHHHHHHCCHHHHHHCCC
GRIALYGILFAYDSDQIEAAAEPTLAEIAKLMRERTDLSILVVGHTDATGSFDYNLGLSR
CCEEEEEEEEEECCCHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCH
RRAEAVVNRLVQLGIEQRRLYPVGVGFSAPVASNTTEEGRAKNRRVELVDLAGGRIP
HHHHHHHHHHHHHCHHHCEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
SFRADLQRFAFAVLTALLVQAGPARADLPGTADPPGLKRFAGSSIVFQSQADYDRFKLA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCHHHHHHH
LEKIVFSGAMGAVQPYRSQTVEGRRITTYYRLPERVAPLEALLNYETELKESGFEILFSG
HHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHCCHHHHHHH
LGEEIETLGYNNQIAHEILNMKGTYSTPEERAQWPFQNARENTAAYLAARGKSPEGDERF
HCHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHEEEEECCCCCCCCCEE
VSAYFVVNTDDWEITRGSGQIPTGITLGRVDVVDVKPRQQRLELVESITSGEINQAISRD
EEEEEEEECCCCEEECCCCCCCCCEEECCEEEEECCCHHHHHHHHHHHHCCHHHHHHCCC
GRIALYGILFAYDSDQIEAAAEPTLAEIAKLMRERTDLSILVVGHTDATGSFDYNLGLSR
CCEEEEEEEEEECCCHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCH
RRAEAVVNRLVQLGIEQRRLYPVGVGFSAPVASNTTEEGRAKNRRVELVDLAGGRIP
HHHHHHHHHHHHHCHHHCEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2180922 [H]