Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is yueF [H]

Identifier: 86608241

GI number: 86608241

Start: 778412

End: 779665

Strand: Reverse

Name: yueF [H]

Synonym: CYB_0757

Alternate gene names: 86608241

Gene position: 779665-778412 (Counterclockwise)

Preceding gene: 86608242

Following gene: 86608238

Centisome position: 25.59

GC content: 59.49

Gene sequence:

>1254_bases
ATGAGCCGAAGACAACTGACCATCTCCGTATCCTCTGTAGCCCTGGTGGTGGCCACAGGGATGCTGTTGTTGCTGCTGTG
GCAACTGCGCAGCTTGGTGCTGACGGTGATGATCGCGGTGGTGGTGGCGGCAGCGCTGGCTCCCCTGGTGGATCTGGCCG
AGCGATTACGCATCCCCCGCTGGCTGGGGGTTGTGCTGGTGTATTTGAGCTTAATTGCCGGGATTGCCGGCTTGGCTCTG
CTTATTGGCCCGACGGTGGCGACTCAGACCCAGCGGTTGCTGACGAGGCTGCCTTTCTATCTGGAGCAGTTGCAACTGTT
GGTGGACACCTGGATTGCTGATCTGGCGGGGGTGGATCCGGCGGCGCTGGACTACTTAAACCAGTTGCTCGATCCTCAGT
CGTTGATGAGCTGGGCAGTTCGCTCGGGACAACGGGTGCTGGTGCAGTCTTTCGACTTCACCCGCGGTTTGCTGGGCGGT
CTGCTAACCACGGTGCTGACCCTCTTCATTTCCGGCTACATGCTGGTGAGCGGCTCTGACTTGGTGCGGGGCTTGGTGGA
GTTGTTTCCTTATCCCTGGAATGACCGGCTGGCTCAGCAGGTACACCCGATGGCTCAGCGCATGGGGGGCTACATCCAGG
GGCGGGTGCTGGTCTCTGCCATTTTGGGTGTGATGATCACCGTCTCGCTTCGCTTTCTGGGCCTGTCGGAGTTTGCTCTG
GCGCTGGGGGTGATCGCTGGGTTTACCAACCTTATCCCCTTCATTGGGCCGGTACTGGGATCCCTGCCCGCCTTGGTGGT
GGCAATCGTTCAGGGGGGCTGGACTTTTTTGTGGGTGCTGATCCTATACGTTGCCGTTCAAAACCTGGAAACCTATGTGT
TGGATCCTCTGTTGGTGGGATCCTCGGTGCGGGTGAAGCCCTTGTATCAGTTGCTGGCGGTGCTGGGGGGCACCCAGTTG
TTGGGTATTGTTGGGGCGGTGATCGCCCCCCCGTGGGTGGCCGGTATGGCGGTGCTGTTGGAGAACCTTTATCTGAAGCC
CAAGCAGGAGGCAGAGGTTCGATCCAGGCTGTATGCTCGGGCCACCGAGGCTGCCGGTTCTTTGGCTTTGCCGGGGATGG
ATTCTGCCGACGCGAGCAACCCAGAGCCATCTTTTTCCTCTGGTCCGAATGGCTCTTCAAATGAGCCGGAAGAGTTGCCA
CAGGAAGAAAGTCTCTCGCCTGCGGATCCCGTAGCCGGAAGAAGTCCTTATTAG

Upstream 100 bases:

>100_bases
AGGAGCATTTGGCAAGTTCGTCCAAGCCAGGCCAGGATGGTAGAGCCATCTGTTACCTAGGGGGGGCTTGAACGCCCCCT
GAAGAGAACCCAGCCAAGTG

Downstream 100 bases:

>100_bases
CAAGCTTCTCATCTATTCGCCTCTGTTGCTCTCGGAGAAGGGCTGCTGTGGTTTTGGGTAGGGTGCACATCTCAGCGGTG
ACGGGCATCGAGGATAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSRRQLTISVSSVALVVATGMLLLLLWQLRSLVLTVMIAVVVAAALAPLVDLAERLRIPRWLGVVLVYLSLIAGIAGLAL
LIGPTVATQTQRLLTRLPFYLEQLQLLVDTWIADLAGVDPAALDYLNQLLDPQSLMSWAVRSGQRVLVQSFDFTRGLLGG
LLTTVLTLFISGYMLVSGSDLVRGLVELFPYPWNDRLAQQVHPMAQRMGGYIQGRVLVSAILGVMITVSLRFLGLSEFAL
ALGVIAGFTNLIPFIGPVLGSLPALVVAIVQGGWTFLWVLILYVAVQNLETYVLDPLLVGSSVRVKPLYQLLAVLGGTQL
LGIVGAVIAPPWVAGMAVLLENLYLKPKQEAEVRSRLYARATEAAGSLALPGMDSADASNPEPSFSSGPNGSSNEPEELP
QEESLSPADPVAGRSPY

Sequences:

>Translated_417_residues
MSRRQLTISVSSVALVVATGMLLLLLWQLRSLVLTVMIAVVVAAALAPLVDLAERLRIPRWLGVVLVYLSLIAGIAGLAL
LIGPTVATQTQRLLTRLPFYLEQLQLLVDTWIADLAGVDPAALDYLNQLLDPQSLMSWAVRSGQRVLVQSFDFTRGLLGG
LLTTVLTLFISGYMLVSGSDLVRGLVELFPYPWNDRLAQQVHPMAQRMGGYIQGRVLVSAILGVMITVSLRFLGLSEFAL
ALGVIAGFTNLIPFIGPVLGSLPALVVAIVQGGWTFLWVLILYVAVQNLETYVLDPLLVGSSVRVKPLYQLLAVLGGTQL
LGIVGAVIAPPWVAGMAVLLENLYLKPKQEAEVRSRLYARATEAAGSLALPGMDSADASNPEPSFSSGPNGSSNEPEELP
QEESLSPADPVAGRSPY
>Mature_416_residues
SRRQLTISVSSVALVVATGMLLLLLWQLRSLVLTVMIAVVVAAALAPLVDLAERLRIPRWLGVVLVYLSLIAGIAGLALL
IGPTVATQTQRLLTRLPFYLEQLQLLVDTWIADLAGVDPAALDYLNQLLDPQSLMSWAVRSGQRVLVQSFDFTRGLLGGL
LTTVLTLFISGYMLVSGSDLVRGLVELFPYPWNDRLAQQVHPMAQRMGGYIQGRVLVSAILGVMITVSLRFLGLSEFALA
LGVIAGFTNLIPFIGPVLGSLPALVVAIVQGGWTFLWVLILYVAVQNLETYVLDPLLVGSSVRVKPLYQLLAVLGGTQLL
GIVGAVIAPPWVAGMAVLLENLYLKPKQEAEVRSRLYARATEAAGSLALPGMDSADASNPEPSFSSGPNGSSNEPEELPQ
EESLSPADPVAGRSPY

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=143, Percent_Identity=34.2657342657343, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 44698; Mature: 44567

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRQLTISVSSVALVVATGMLLLLLWQLRSLVLTVMIAVVVAAALAPLVDLAERLRIPR
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
WLGVVLVYLSLIAGIAGLALLIGPTVATQTQRLLTRLPFYLEQLQLLVDTWIADLAGVDP
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
AALDYLNQLLDPQSLMSWAVRSGQRVLVQSFDFTRGLLGGLLTTVLTLFISGYMLVSGSD
HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LVRGLVELFPYPWNDRLAQQVHPMAQRMGGYIQGRVLVSAILGVMITVSLRFLGLSEFAL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGVIAGFTNLIPFIGPVLGSLPALVVAIVQGGWTFLWVLILYVAVQNLETYVLDPLLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSVRVKPLYQLLAVLGGTQLLGIVGAVIAPPWVAGMAVLLENLYLKPKQEAEVRSRLYAR
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ATEAAGSLALPGMDSADASNPEPSFSSGPNGSSNEPEELPQEESLSPADPVAGRSPY
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRRQLTISVSSVALVVATGMLLLLLWQLRSLVLTVMIAVVVAAALAPLVDLAERLRIPR
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
WLGVVLVYLSLIAGIAGLALLIGPTVATQTQRLLTRLPFYLEQLQLLVDTWIADLAGVDP
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
AALDYLNQLLDPQSLMSWAVRSGQRVLVQSFDFTRGLLGGLLTTVLTLFISGYMLVSGSD
HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LVRGLVELFPYPWNDRLAQQVHPMAQRMGGYIQGRVLVSAILGVMITVSLRFLGLSEFAL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGVIAGFTNLIPFIGPVLGSLPALVVAIVQGGWTFLWVLILYVAVQNLETYVLDPLLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSVRVKPLYQLLAVLGGTQLLGIVGAVIAPPWVAGMAVLLENLYLKPKQEAEVRSRLYAR
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ATEAAGSLALPGMDSADASNPEPSFSSGPNGSSNEPEELPQEESLSPADPVAGRSPY
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]