Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608238

Identifier: 86608238

GI number: 86608238

Start: 776908

End: 777240

Strand: Reverse

Name: 86608238

Synonym: CYB_0754

Alternate gene names: NA

Gene position: 777240-776908 (Counterclockwise)

Preceding gene: 86608241

Following gene: 86608232

Centisome position: 25.51

GC content: 58.56

Gene sequence:

>333_bases
ATGCCCATTCGCGCCAATTCCCCCATTCCCACGACCCAGATGGAAGTGACCAGCATTCGGCTGGAACGTGAGCTGAAGCA
GCGACTGAAGGCGTTGGCCGGAAATCAGGGTTACCAGGCCCTCATACGGGAAATTCTTTGGAGTTATGTCCTGCGTCACT
CTCAAGGGGCTGCCACCCTCAGTCCTGAGGATATTCGGGCCAGCTTCCCGGCCACGGCCCACCAAGCCCAATGCTGTGCT
CTCACCGGACGGGCCATTCAACCGCAGGAGCCAATGTTGCTGGGGTGGACCACCGATGGAAAGTTCGTCGCCCTTAGCTC
CTCCTGCTTTTAA

Upstream 100 bases:

>100_bases
TTTTGACCTGAGCCATCTCACCCAGGCCGGGATCCCCGCTCAGGCGGTAAGCCAGCTATGCTACAGGAGTAGTATAGGCT
TTTCGAGGGAGGATCCCTGC

Downstream 100 bases:

>100_bases
TCTTTGTTTTGGGGTCTCTCTCCAGTTTGCGAAGGGATCCAACCGGCACGAGTGCCCATCCGTTTAGATGCCACGAAGTT
CTCGATATTTTCTGGCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MPIRANSPIPTTQMEVTSIRLERELKQRLKALAGNQGYQALIREILWSYVLRHSQGAATLSPEDIRASFPATAHQAQCCA
LTGRAIQPQEPMLLGWTTDGKFVALSSSCF

Sequences:

>Translated_110_residues
MPIRANSPIPTTQMEVTSIRLERELKQRLKALAGNQGYQALIREILWSYVLRHSQGAATLSPEDIRASFPATAHQAQCCA
LTGRAIQPQEPMLLGWTTDGKFVALSSSCF
>Mature_109_residues
PIRANSPIPTTQMEVTSIRLERELKQRLKALAGNQGYQALIREILWSYVLRHSQGAATLSPEDIRASFPATAHQAQCCAL
TGRAIQPQEPMLLGWTTDGKFVALSSSCF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12142; Mature: 12011

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRANSPIPTTQMEVTSIRLERELKQRLKALAGNQGYQALIREILWSYVLRHSQGAATL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SPEDIRASFPATAHQAQCCALTGRAIQPQEPMLLGWTTDGKFVALSSSCF
CHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCC
>Mature Secondary Structure 
PIRANSPIPTTQMEVTSIRLERELKQRLKALAGNQGYQALIREILWSYVLRHSQGAATL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SPEDIRASFPATAHQAQCCALTGRAIQPQEPMLLGWTTDGKFVALSSSCF
CHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA