Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608238
Identifier: 86608238
GI number: 86608238
Start: 776908
End: 777240
Strand: Reverse
Name: 86608238
Synonym: CYB_0754
Alternate gene names: NA
Gene position: 777240-776908 (Counterclockwise)
Preceding gene: 86608241
Following gene: 86608232
Centisome position: 25.51
GC content: 58.56
Gene sequence:
>333_bases ATGCCCATTCGCGCCAATTCCCCCATTCCCACGACCCAGATGGAAGTGACCAGCATTCGGCTGGAACGTGAGCTGAAGCA GCGACTGAAGGCGTTGGCCGGAAATCAGGGTTACCAGGCCCTCATACGGGAAATTCTTTGGAGTTATGTCCTGCGTCACT CTCAAGGGGCTGCCACCCTCAGTCCTGAGGATATTCGGGCCAGCTTCCCGGCCACGGCCCACCAAGCCCAATGCTGTGCT CTCACCGGACGGGCCATTCAACCGCAGGAGCCAATGTTGCTGGGGTGGACCACCGATGGAAAGTTCGTCGCCCTTAGCTC CTCCTGCTTTTAA
Upstream 100 bases:
>100_bases TTTTGACCTGAGCCATCTCACCCAGGCCGGGATCCCCGCTCAGGCGGTAAGCCAGCTATGCTACAGGAGTAGTATAGGCT TTTCGAGGGAGGATCCCTGC
Downstream 100 bases:
>100_bases TCTTTGTTTTGGGGTCTCTCTCCAGTTTGCGAAGGGATCCAACCGGCACGAGTGCCCATCCGTTTAGATGCCACGAAGTT CTCGATATTTTCTGGCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MPIRANSPIPTTQMEVTSIRLERELKQRLKALAGNQGYQALIREILWSYVLRHSQGAATLSPEDIRASFPATAHQAQCCA LTGRAIQPQEPMLLGWTTDGKFVALSSSCF
Sequences:
>Translated_110_residues MPIRANSPIPTTQMEVTSIRLERELKQRLKALAGNQGYQALIREILWSYVLRHSQGAATLSPEDIRASFPATAHQAQCCA LTGRAIQPQEPMLLGWTTDGKFVALSSSCF >Mature_109_residues PIRANSPIPTTQMEVTSIRLERELKQRLKALAGNQGYQALIREILWSYVLRHSQGAATLSPEDIRASFPATAHQAQCCAL TGRAIQPQEPMLLGWTTDGKFVALSSSCF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12142; Mature: 12011
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRANSPIPTTQMEVTSIRLERELKQRLKALAGNQGYQALIREILWSYVLRHSQGAATL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC SPEDIRASFPATAHQAQCCALTGRAIQPQEPMLLGWTTDGKFVALSSSCF CHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCC >Mature Secondary Structure PIRANSPIPTTQMEVTSIRLERELKQRLKALAGNQGYQALIREILWSYVLRHSQGAATL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC SPEDIRASFPATAHQAQCCALTGRAIQPQEPMLLGWTTDGKFVALSSSCF CHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA