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The map label for this gene is cbbYC [H]

Identifier: 86608232

GI number: 86608232

Start: 771272

End: 772054

Strand: Reverse

Name: cbbYC [H]

Synonym: CYB_0748

Alternate gene names: 86608232

Gene position: 772054-771272 (Counterclockwise)

Preceding gene: 86608238

Following gene: 86608231

Centisome position: 25.34

GC content: 60.79

Gene sequence:

>783_bases
ATGGAACTGCAAGCTTTGATTTTCGATGTGGACGGCACGCTGGCGGACACGGAGCGGGATGGCCATCGCGTGGCCTTCAA
CGCCGCCTTTGCCGAGGCAGGGCTGGACTGGCACTGGTCGGTGGAGCTCTACGGCCAACTCCTGGCCATTACGGGGGGTA
AAGAGCGCATTCGCCATTTCGTTGCAACCTGCCAGCCGCCGCTACCCCCTGGTGAAGATTTAAATGCCCTCATTGCCCGG
CTGCACCAGGCCAAAACCCGCCACTACACTGCCCTATTGGCCCAAGGGGGGATCCCACTCCGCCCAGGGGTGAAGCGCCT
CCTGCAGGAGGCCAGAGCTGCTGGGATCCGCTTGGCCATTGCCACCACCACCACGCCGGAAAATGTAACAGCCCTTTTGG
AGCACACACTGCCGGAGAGCCTAAGCTGGTTTGAAGTGATCGCTGCCGGAGATGTGGTCCCCGCCAAAAAGCCTGCTCCC
GATATTTACCACTATGTTCTGGAGCGAATGGGGCTGCCCCCCCAGGCCTGCCTGGCCTTTGAAGACTCGGAGAATGGGCT
GCGCTCGGCCCAACAAGCGGGGGTCCCCACTGTGGTGACGGTAAACGACTATACCCGGGATCAGGATTTTTCCGGGGCAG
CTTTGGTGTTGGATCACCTAGGGGATCCTGAGAATCCCTTTCGGGTGTTGGCGGGAACGGTGGGATCCCACCGCTACTTC
ACCCTGGAGTTGGCCCGACAGATCCATGCTCAAGTTGCCCGGTCTGGAGTGGGAAGCTCATGA

Upstream 100 bases:

>100_bases
ATTCTCTCATCTTGTCGGCCTTCCCAGAAACCAGGCTGAGAGCACCCAAACCATGGGGTAGCATAGGGTCGCTTGTAGCT
GGGGGGGAGCGGGGGTACGC

Downstream 100 bases:

>100_bases
TGGCGTCAGATCTCCAAGACCTGCGGCAGCGCCTAGAGGCTCATCTGCAGCAAGTGGCCCAGCCCCGGGATCCCGACTGG
TCGCCCTTGGGCCATCAGCA

Product: HAD family hydrolase

Products: Glycolate; Phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MELQALIFDVDGTLADTERDGHRVAFNAAFAEAGLDWHWSVELYGQLLAITGGKERIRHFVATCQPPLPPGEDLNALIAR
LHQAKTRHYTALLAQGGIPLRPGVKRLLQEARAAGIRLAIATTTTPENVTALLEHTLPESLSWFEVIAAGDVVPAKKPAP
DIYHYVLERMGLPPQACLAFEDSENGLRSAQQAGVPTVVTVNDYTRDQDFSGAALVLDHLGDPENPFRVLAGTVGSHRYF
TLELARQIHAQVARSGVGSS

Sequences:

>Translated_260_residues
MELQALIFDVDGTLADTERDGHRVAFNAAFAEAGLDWHWSVELYGQLLAITGGKERIRHFVATCQPPLPPGEDLNALIAR
LHQAKTRHYTALLAQGGIPLRPGVKRLLQEARAAGIRLAIATTTTPENVTALLEHTLPESLSWFEVIAAGDVVPAKKPAP
DIYHYVLERMGLPPQACLAFEDSENGLRSAQQAGVPTVVTVNDYTRDQDFSGAALVLDHLGDPENPFRVLAGTVGSHRYF
TLELARQIHAQVARSGVGSS
>Mature_260_residues
MELQALIFDVDGTLADTERDGHRVAFNAAFAEAGLDWHWSVELYGQLLAITGGKERIRHFVATCQPPLPPGEDLNALIAR
LHQAKTRHYTALLAQGGIPLRPGVKRLLQEARAAGIRLAIATTTTPENVTALLEHTLPESLSWFEVIAAGDVVPAKKPAP
DIYHYVLERMGLPPQACLAFEDSENGLRSAQQAGVPTVVTVNDYTRDQDFSGAALVLDHLGDPENPFRVLAGTVGSHRYF
TLELARQIHAQVARSGVGSS

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=209, Percent_Identity=28.7081339712919, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1789046, Length=197, Percent_Identity=29.9492385786802, Blast_Score=61, Evalue=8e-11,
Organism=Drosophila melanogaster, GI116008157, Length=220, Percent_Identity=29.5454545454545, Blast_Score=71, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 3.1.3.18 [C]

Molecular weight: Translated: 28197; Mature: 28197

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELQALIFDVDGTLADTERDGHRVAFNAAFAEAGLDWHWSVELYGQLLAITGGKERIRHF
CCCEEEEEECCCCEECCCCCCCEEEEEEHHHHCCCCEEEEHEEEEEEEEEECCHHHHHHH
VATCQPPLPPGEDLNALIARLHQAKTRHYTALLAQGGIPLRPGVKRLLQEARAAGIRLAI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEE
ATTTTPENVTALLEHTLPESLSWFEVIAAGDVVPAKKPAPDIYHYVLERMGLPPQACLAF
EECCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEE
EDSENGLRSAQQAGVPTVVTVNDYTRDQDFSGAALVLDHLGDPENPFRVLAGTVGSHRYF
ECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHEEECCCCCCCCCEEEEECCCCCEEE
TLELARQIHAQVARSGVGSS
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MELQALIFDVDGTLADTERDGHRVAFNAAFAEAGLDWHWSVELYGQLLAITGGKERIRHF
CCCEEEEEECCCCEECCCCCCCEEEEEEHHHHCCCCEEEEHEEEEEEEEEECCHHHHHHH
VATCQPPLPPGEDLNALIARLHQAKTRHYTALLAQGGIPLRPGVKRLLQEARAAGIRLAI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEE
ATTTTPENVTALLEHTLPESLSWFEVIAAGDVVPAKKPAPDIYHYVLERMGLPPQACLAF
EECCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEE
EDSENGLRSAQQAGVPTVVTVNDYTRDQDFSGAALVLDHLGDPENPFRVLAGTVGSHRYF
ECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHEEECCCCCCCCCEEEEECCCCCEEE
TLELARQIHAQVARSGVGSS
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mg2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.57 {phosphoglycolate}} [C]

Substrates: D-Glycerate 2-phosphatelyc; H2O [C]

Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]

General reaction: Additional information:

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1429456 [H]