Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is fdx [C]

Identifier: 86608062

GI number: 86608062

Start: 579742

End: 580272

Strand: Direct

Name: fdx [C]

Synonym: CYB_0571

Alternate gene names: 86608062

Gene position: 579742-580272 (Clockwise)

Preceding gene: 86608060

Following gene: 86608064

Centisome position: 19.03

GC content: 57.06

Gene sequence:

>531_bases
TTGCCCGCCGGGGTTTTTTGTCTGCCCTTAATGTGGATCCCGTCTATGGTTAAACAAATCCGGCTAGAGCCTTTATCTCG
TGTCTCGGAGGTCGATACCTACAGCAATCTGCTGTCGGCCATTTTGTCGGAGGAGCTGCAGGTTTCGCGGGAATGTAACG
GTCGCGGCCTCTGCGCCACCTGTCATGTTTACGTCAAAGAGGGAATGGAAAGCCTCACTCCCATCACCCCCCGCGAGGCC
AAGACTCTGGAGACCATTACCAGCGCCCGCAGCAATTCCCGGCTGGCCTGTCAGGCGCGGGTGGTTTCCGATGGCGTGGT
GGTGGAGCTGCCGCCGGGGATGTACGTGAACTCGCTGAGGGATATCGAAGTGCTCATCGGTCGGCGGGCCGAACAAGACC
TGCTGCACCCACGGACGGGGAAGGTTTTGGTGGAGCAGGGCAAGATCATCACTCGCTCTACTGTTAAGCAGCTAGAAAAT
GAAGATTTCCGCATCATCGGCAGTACACTTGCCCAAACTCGGGAAGTTTGA

Upstream 100 bases:

>100_bases
TAATCGACTGGGAAATCAGGTGTTGCCGTAGACCTGCAGAAGGACTGCAGGGAAGGGAGTTAATTGTTGTGATTTGTTTG
CGTTGCTTTTGCAGTAGATC

Downstream 100 bases:

>100_bases
TGGATTGTCGATGTTCAGGGATCCCTTGGGCTCGGCAGGTGTTGTTTTATAAACAATCAAACAAGAGTTGAACAATGTTG
GATCCCTCAGATAGCTGACA

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: Ferredoxin 2Fe-2S Type

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPAGVFCLPLMWIPSMVKQIRLEPLSRVSEVDTYSNLLSAILSEELQVSRECNGRGLCATCHVYVKEGMESLTPITPREA
KTLETITSARSNSRLACQARVVSDGVVVELPPGMYVNSLRDIEVLIGRRAEQDLLHPRTGKVLVEQGKIITRSTVKQLEN
EDFRIIGSTLAQTREV

Sequences:

>Translated_176_residues
MPAGVFCLPLMWIPSMVKQIRLEPLSRVSEVDTYSNLLSAILSEELQVSRECNGRGLCATCHVYVKEGMESLTPITPREA
KTLETITSARSNSRLACQARVVSDGVVVELPPGMYVNSLRDIEVLIGRRAEQDLLHPRTGKVLVEQGKIITRSTVKQLEN
EDFRIIGSTLAQTREV
>Mature_175_residues
PAGVFCLPLMWIPSMVKQIRLEPLSRVSEVDTYSNLLSAILSEELQVSRECNGRGLCATCHVYVKEGMESLTPITPREAK
TLETITSARSNSRLACQARVVSDGVVVELPPGMYVNSLRDIEVLIGRRAEQDLLHPRTGKVLVEQGKIITRSTVKQLENE
DFRIIGSTLAQTREV

Specific function: Ferredoxin Are Iron-Sulfur Proteins That Transfer Electrons In A Wide Variety Of Metabolic Reactions. Although The Function Of This Ferredoxin Is Unknown It Is Probable That It Has A Role As A Cellular Electron Transfer Protein. Involved In The In Vivo As

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19551; Mature: 19420

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGVFCLPLMWIPSMVKQIRLEPLSRVSEVDTYSNLLSAILSEELQVSRECNGRGLCAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
CHVYVKEGMESLTPITPREAKTLETITSARSNSRLACQARVVSDGVVVELPPGMYVNSLR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCCHHHHHHH
DIEVLIGRRAEQDLLHPRTGKVLVEQGKIITRSTVKQLENEDFRIIGSTLAQTREV
HHHHHHCCCCHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHCCC
>Mature Secondary Structure 
PAGVFCLPLMWIPSMVKQIRLEPLSRVSEVDTYSNLLSAILSEELQVSRECNGRGLCAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
CHVYVKEGMESLTPITPREAKTLETITSARSNSRLACQARVVSDGVVVELPPGMYVNSLR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCCHHHHHHH
DIEVLIGRRAEQDLLHPRTGKVLVEQGKIITRSTVKQLENEDFRIIGSTLAQTREV
HHHHHHCCCCHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA