Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608064

Identifier: 86608064

GI number: 86608064

Start: 580504

End: 581184

Strand: Direct

Name: 86608064

Synonym: CYB_0572

Alternate gene names: NA

Gene position: 580504-581184 (Clockwise)

Preceding gene: 86608062

Following gene: 86608065

Centisome position: 19.05

GC content: 55.07

Gene sequence:

>681_bases
ATGGCCACCACATCTCGACCGGATCCCCGTCCTGCAGTCACCATGCCTGTGGGCCGTGACAAGCATGCTCACTACAGTTA
CCGCGATTTCTTTCGCTTCAACCGAGATCAGGGCACGATTATCGATTGGAACAACACCCAAAATCTGCTGTTGAGCGAAG
ACTTTATTGTGGGCTTGCAAACAGGCCTGGAACGGGAAGTGGGGGATGCTTCGGCGGCGGTGATGTACACCATTGGCAGA
GATTGGGGCATCCGCGATGCCAAGCACTTCTCCGAGTGGTACGAGCGGGAGTATGGGATTGGCGTAAAACAGTCCAACCT
TTTGTTTTTGCTGGAGACTTGGTGGTGGCCTTTTACGGCTCAGGGCTGGGGCAAGTGGGAGGTGGAAACCGAATCCAAAC
AAAAAGGCTTCCTGTTTATCAACTTGTTTGACTCGATGGTGGCTCGCACCCTTGGGGATGTGGGCAAGCCGGTTTGTCAT
CTCTATGCCGGGCTATTTGCCGGGTTTTTCACCGCTATGACTTCCCGCGAGCTGGCCTGCATCGAGATCCAGTGCTACGC
CATGGGGGAAACCTACTGCAAATTCCTGTTGGGCGGGCAAGAACGCATTGATGCCGCCAATTTTTGGATCACCGAAGGGG
CCAGCGCCCGCGAGATCGAGCAGCGTTTGCACCAGTTGTGA

Upstream 100 bases:

>100_bases
TGACTCATTGGCATTGTCTGGCCCAGTTGATCCCTACAAATCCCACCAAATCCTGTTGCTTTGCAATCTAGAATTATCCA
TTTTTTATCAGGAGAGCGCC

Downstream 100 bases:

>100_bases
GGCTTGCTTGTGGCTTTTGAAGGCTCTCTGGGATCCCTCGACACTTTGGAGAAACGCCCATGGTCACCTTCAACTTAGAC
ACCGATCTGGACTTAACCCA

Product: bacteriochlorophyll 4-vinyl reductase

Products: NA

Alternate protein names: 4-Vinyl Reductase 4VR; Bacteriochlorophyll 4-Vinyl Reductase

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MATTSRPDPRPAVTMPVGRDKHAHYSYRDFFRFNRDQGTIIDWNNTQNLLLSEDFIVGLQTGLEREVGDASAAVMYTIGR
DWGIRDAKHFSEWYEREYGIGVKQSNLLFLLETWWWPFTAQGWGKWEVETESKQKGFLFINLFDSMVARTLGDVGKPVCH
LYAGLFAGFFTAMTSRELACIEIQCYAMGETYCKFLLGGQERIDAANFWITEGASAREIEQRLHQL

Sequences:

>Translated_226_residues
MATTSRPDPRPAVTMPVGRDKHAHYSYRDFFRFNRDQGTIIDWNNTQNLLLSEDFIVGLQTGLEREVGDASAAVMYTIGR
DWGIRDAKHFSEWYEREYGIGVKQSNLLFLLETWWWPFTAQGWGKWEVETESKQKGFLFINLFDSMVARTLGDVGKPVCH
LYAGLFAGFFTAMTSRELACIEIQCYAMGETYCKFLLGGQERIDAANFWITEGASAREIEQRLHQL
>Mature_225_residues
ATTSRPDPRPAVTMPVGRDKHAHYSYRDFFRFNRDQGTIIDWNNTQNLLLSEDFIVGLQTGLEREVGDASAAVMYTIGRD
WGIRDAKHFSEWYEREYGIGVKQSNLLFLLETWWWPFTAQGWGKWEVETESKQKGFLFINLFDSMVARTLGDVGKPVCHL
YAGLFAGFFTAMTSRELACIEIQCYAMGETYCKFLLGGQERIDAANFWITEGASAREIEQRLHQL

Specific function: Unknown

COG id: COG1719

COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26007; Mature: 25875

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTSRPDPRPAVTMPVGRDKHAHYSYRDFFRFNRDQGTIIDWNNTQNLLLSEDFIVGLQ
CCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCEEEECCEEEEHH
TGLEREVGDASAAVMYTIGRDWGIRDAKHFSEWYEREYGIGVKQSNLLFLLETWWWPFTA
HCCCHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEC
QGWGKWEVETESKQKGFLFINLFDSMVARTLGDVGKPVCHLYAGLFAGFFTAMTSRELAC
CCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEE
IEIQCYAMGETYCKFLLGGQERIDAANFWITEGASAREIEQRLHQL
EEEEEEECCHHHHHHHHCCHHHCCHHHEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure 
ATTSRPDPRPAVTMPVGRDKHAHYSYRDFFRFNRDQGTIIDWNNTQNLLLSEDFIVGLQ
CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCEEEECCEEEEHH
TGLEREVGDASAAVMYTIGRDWGIRDAKHFSEWYEREYGIGVKQSNLLFLLETWWWPFTA
HCCCHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEC
QGWGKWEVETESKQKGFLFINLFDSMVARTLGDVGKPVCHLYAGLFAGFFTAMTSRELAC
CCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEE
IEIQCYAMGETYCKFLLGGQERIDAANFWITEGASAREIEQRLHQL
EEEEEEECCHHHHHHHHCCHHHCCHHHEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA