| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607658
Identifier: 86607658
GI number: 86607658
Start: 171358
End: 171999
Strand: Reverse
Name: 86607658
Synonym: CYB_0156
Alternate gene names: NA
Gene position: 171999-171358 (Counterclockwise)
Preceding gene: 86607659
Following gene: 86607657
Centisome position: 5.65
GC content: 57.32
Gene sequence:
>642_bases ATGTCCCCCGAAGGCGGTGCTCCCGCAGATCCCTCTCCGTCCTCTTGGGATCCCTCCCTGGACAAAGCCCACCTGGATTT ACGAGCCGCGCGCTGTGGCCAAGTGGATCTGGAAACCGATCGGGAGACCTTGGCCCGTTACCTGAGAGGCCATGCCCAGT GGATCCAGCGGTGCTTTAGGCCGTTGCAGGTGGAAGCTTTGTCTGCCGAGACTTACAGGTTGCAGTTTTTCCGCATGGGC GGGCTGGGGTTTGAGCTGGAGCCCAGTTTTGGGGTCAAGATCTGGCCGGATAAAGATTACCGGTTTTGTCTGACCTCGAT TGAGTTGCCCGGCGATGAAGGAATGCCTTACCGGGTCAGCTGCCAAGCCGATTTCCGGCTGGAGGAGCTACAGGGATCCC TGAAAGACCTGCCCACAACTCGTGTTCACTGGTCTCTTCATCTGGAGATTGGGCTGGCTTTGCCCAGGTTTTTGCAGGTT TTGCCCCGCAAGTTGGTTTATCGGGTGGCCCGTCAAGTGGTGCAGCAGGTAACCCGGGGTATGAGTGACCGCCTCACCCA CAATGTGTGCAGCGATTTCTATCGCTCTATTGGGTGTCCCGATCACCCCTATCGCTTAATTGCAGTGGAAGACAAAGCGT GA
Upstream 100 bases:
>100_bases CTCTGGTACCACTGCCTCGTGGCCCTTGCTCACTATCAGGTAGATGTTAGGGATGTCTATCGCCAGCTCCAAGCCCGCCG TTCCGCCAAGTGAAAGGGCC
Downstream 100 bases:
>100_bases TATCTTAGGTGCCAAGTAAGTTGCCGGTCAGCTTTCGAGTAGTGCTCCGGCAACCGGCGATGGAGTTCGCCGCAACCGCC TCACTTGGAATTTTTCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSPEGGAPADPSPSSWDPSLDKAHLDLRAARCGQVDLETDRETLARYLRGHAQWIQRCFRPLQVEALSAETYRLQFFRMG GLGFELEPSFGVKIWPDKDYRFCLTSIELPGDEGMPYRVSCQADFRLEELQGSLKDLPTTRVHWSLHLEIGLALPRFLQV LPRKLVYRVARQVVQQVTRGMSDRLTHNVCSDFYRSIGCPDHPYRLIAVEDKA
Sequences:
>Translated_213_residues MSPEGGAPADPSPSSWDPSLDKAHLDLRAARCGQVDLETDRETLARYLRGHAQWIQRCFRPLQVEALSAETYRLQFFRMG GLGFELEPSFGVKIWPDKDYRFCLTSIELPGDEGMPYRVSCQADFRLEELQGSLKDLPTTRVHWSLHLEIGLALPRFLQV LPRKLVYRVARQVVQQVTRGMSDRLTHNVCSDFYRSIGCPDHPYRLIAVEDKA >Mature_212_residues SPEGGAPADPSPSSWDPSLDKAHLDLRAARCGQVDLETDRETLARYLRGHAQWIQRCFRPLQVEALSAETYRLQFFRMGG LGFELEPSFGVKIWPDKDYRFCLTSIELPGDEGMPYRVSCQADFRLEELQGSLKDLPTTRVHWSLHLEIGLALPRFLQVL PRKLVYRVARQVVQQVTRGMSDRLTHNVCSDFYRSIGCPDHPYRLIAVEDKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24362; Mature: 24231
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPEGGAPADPSPSSWDPSLDKAHLDLRAARCGQVDLETDRETLARYLRGHAQWIQRCFR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC PLQVEALSAETYRLQFFRMGGLGFELEPSFGVKIWPDKDYRFCLTSIELPGDEGMPYRVS HHEEEEECCCEEEEEEEEECCCCEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCEEEE CQADFRLEELQGSLKDLPTTRVHWSLHLEIGLALPRFLQVLPRKLVYRVARQVVQQVTRG ECCCCCHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MSDRLTHNVCSDFYRSIGCPDHPYRLIAVEDKA HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC >Mature Secondary Structure SPEGGAPADPSPSSWDPSLDKAHLDLRAARCGQVDLETDRETLARYLRGHAQWIQRCFR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC PLQVEALSAETYRLQFFRMGGLGFELEPSFGVKIWPDKDYRFCLTSIELPGDEGMPYRVS HHEEEEECCCEEEEEEEEECCCCEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCEEEE CQADFRLEELQGSLKDLPTTRVHWSLHLEIGLALPRFLQVLPRKLVYRVARQVVQQVTRG ECCCCCHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MSDRLTHNVCSDFYRSIGCPDHPYRLIAVEDKA HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA