Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607657

Identifier: 86607657

GI number: 86607657

Start: 169411

End: 171030

Strand: Reverse

Name: 86607657

Synonym: CYB_0155

Alternate gene names: NA

Gene position: 171030-169411 (Counterclockwise)

Preceding gene: 86607658

Following gene: 86607656

Centisome position: 5.61

GC content: 61.67

Gene sequence:

>1620_bases
ATGGGCTTTTTTGTCGGCCAAATCGTGGGTCGGTTGGGGATGCCCCCCCTGCTGGGGATGATCCTCGTGGGGATCTTGCT
GGGAGATGTCCTATCCCCGGAGGTGCTGGCAGCGGCGGGGGATCTGCGGGTGGTGGCGGTGATGATCATTTTGATGAAGG
CGGGCCTGGGGCTGGATCGGGAGAAGCTGGCCCAGCAGGGATCCGTGGCGTTGCGGCTGGGGTTTTTGCCGGCAGCCTGC
GAGGCGGTGGCGGTGGCCCTGTTGAGCACCTGGATCCTGGGGTTGGACTGGCCTACCGGTTTGCTGCTGGGCTGTGTGAT
CGGGGCAGAGTCGCCGGCTGTGATCGTGCCGGGGATGTTGCGCCTCAAGAGTTTGGGCTGGGGAGTAACCAAAGGGATCC
CGGATGCCATTTTGACCGGCAGCGCCCTTTCCGACGTACTGCTGTTGTTGGGGTTTAGCCTGCTGCTCAGCTTTTTGGGC
CAAGGATCCGCCGCGAGCGTTCGCTTGGGAAGCCTGGAGCTGTCGCCGCTGCAGTGGCTGCCGTTCCAGGTGGTGATGGA
GATCCTGCTGGGCGTGGCTGTAGGCTACCTGGGGGCGCGGGTTCTGGTGTCGCTGCTAACCCAACAAAACTGGACTCGCA
ACAGCGTGCAGGAAGTGCTGCTGGCTGCCTGCATGGCCTTGGGCTTGGTGCTGGCGCCGCAGGTGTGGCCCTATTTTTCC
GGCTATCTGGCGGTGATGGCCATGGGGTTTTTTCTGATTGAGCTGGATGCCCCTTTGGCGCGGCGGCTGCGGGGTGGGTT
CGATGCCCTCTGGACGGTGGCGGAGATCGTGTTGTTTGTGCTACTGGGAGCGTCGCTGGATCTGGGGGTGCTAGGATCCG
TGTTTTGGCCGGGCTTGCTGCTCTTAACCCTGAGCCTGCTGCTAGGGCGGGGCCTGGGTTGGTGGCTTTCCACTCTGGGA
AGCAATTGGAACGGGCGGGAGCGGCTGTTTTTGCTACCGGGCAACATGGCCAAGGCGACGGTGCAGGCGGCTATTGGTGG
GATCCCTTTGGCCCAAGGGATCCCCGGTGGGGAGATCATTTTGGCCTTGGCGGCTTTGTCAATTCTGGTTACCGCTCCCC
TGGGCGCTTGGCTGACCCAGGTTTGCGCCCCCCGGCTTTTGGAAAAAGGAGAGGTGGATCCCACCAAGGTAGGCAGCCAG
GGCAAGGTGAGCTTTTTGGCAGCGGTGGACACCTCCCCTTTGGCCGAAGCCGTGCTGCGCAAGGTGGCCGATTTGGCGCG
GCGGGTGGATGGGGAAGTGATTGTGTTGCATGTTACCGATAAGCCGCAGGGGAAAGGGGTAGAACTGTTGCGGCAACTCA
CCCAGCGTCTTTTGGCGGATATTCGCCACCAGTTTTGCTTGGCCTCGGGGCCCTTGGCAGAGACCATCGTAACCCTAGCT
CAGGAGCGGCAGGTAACCGACATCGTCATGGGCAAGCGGGGGCACCGCGGCTGGGAGCAGGTTTTGGTGGGATCCACTTC
CCAAGCGGTGTTGGAAACCAGCCCGATTCCGGTAATTTTGGTAGAGGAAGAGGACTTCAAGAGAAGCAGGATCCCTATCT
CTGAGGGCAGAAAAAGCTAA

Upstream 100 bases:

>100_bases
TGACGCGGATGGCTTTTTCTCCCTGGGCTGCCCTTCAACACCCTGACGACAAGGAGATGAGGATCTGGTGATGCTGGGCA
GTTGGCTGTGGATCTTGGTG

Downstream 100 bases:

>100_bases
GGATCCCACCTTTTCCGTAGGAAGTTCTGGGAACACAGTTCAAGGAGAATAGATGCGCTTGCAATCGGTGTGGGCTTACC
TAAACCATGGCTTGGTCTCT

Product: sodium/hydrogen exchanger/universal stress family protein

Products: NA

Alternate protein names: Na(+)/H(+) Antiporter; Transporter CPA2 Family; Na+/H+ Antiporter; Sodium/Proton Antiporter CPA1 Family; Na+/H+-Exchanging Protein; Sodium/Hydrogen Antiporter; Sodium/Hydrogen Exchanger Family Protein; Na+/H+-Exchanging ProteinNa+/H+ Antiporter; Monovalent CationProton Antiporter-2 Family Protein; Transporter Monovalent CationProton Antiporter-2 Family; Sodium/Hydrogen Exchanger/Universal Stress Family Protein

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MGFFVGQIVGRLGMPPLLGMILVGILLGDVLSPEVLAAAGDLRVVAVMIILMKAGLGLDREKLAQQGSVALRLGFLPAAC
EAVAVALLSTWILGLDWPTGLLLGCVIGAESPAVIVPGMLRLKSLGWGVTKGIPDAILTGSALSDVLLLLGFSLLLSFLG
QGSAASVRLGSLELSPLQWLPFQVVMEILLGVAVGYLGARVLVSLLTQQNWTRNSVQEVLLAACMALGLVLAPQVWPYFS
GYLAVMAMGFFLIELDAPLARRLRGGFDALWTVAEIVLFVLLGASLDLGVLGSVFWPGLLLLTLSLLLGRGLGWWLSTLG
SNWNGRERLFLLPGNMAKATVQAAIGGIPLAQGIPGGEIILALAALSILVTAPLGAWLTQVCAPRLLEKGEVDPTKVGSQ
GKVSFLAAVDTSPLAEAVLRKVADLARRVDGEVIVLHVTDKPQGKGVELLRQLTQRLLADIRHQFCLASGPLAETIVTLA
QERQVTDIVMGKRGHRGWEQVLVGSTSQAVLETSPIPVILVEEEDFKRSRIPISEGRKS

Sequences:

>Translated_539_residues
MGFFVGQIVGRLGMPPLLGMILVGILLGDVLSPEVLAAAGDLRVVAVMIILMKAGLGLDREKLAQQGSVALRLGFLPAAC
EAVAVALLSTWILGLDWPTGLLLGCVIGAESPAVIVPGMLRLKSLGWGVTKGIPDAILTGSALSDVLLLLGFSLLLSFLG
QGSAASVRLGSLELSPLQWLPFQVVMEILLGVAVGYLGARVLVSLLTQQNWTRNSVQEVLLAACMALGLVLAPQVWPYFS
GYLAVMAMGFFLIELDAPLARRLRGGFDALWTVAEIVLFVLLGASLDLGVLGSVFWPGLLLLTLSLLLGRGLGWWLSTLG
SNWNGRERLFLLPGNMAKATVQAAIGGIPLAQGIPGGEIILALAALSILVTAPLGAWLTQVCAPRLLEKGEVDPTKVGSQ
GKVSFLAAVDTSPLAEAVLRKVADLARRVDGEVIVLHVTDKPQGKGVELLRQLTQRLLADIRHQFCLASGPLAETIVTLA
QERQVTDIVMGKRGHRGWEQVLVGSTSQAVLETSPIPVILVEEEDFKRSRIPISEGRKS
>Mature_538_residues
GFFVGQIVGRLGMPPLLGMILVGILLGDVLSPEVLAAAGDLRVVAVMIILMKAGLGLDREKLAQQGSVALRLGFLPAACE
AVAVALLSTWILGLDWPTGLLLGCVIGAESPAVIVPGMLRLKSLGWGVTKGIPDAILTGSALSDVLLLLGFSLLLSFLGQ
GSAASVRLGSLELSPLQWLPFQVVMEILLGVAVGYLGARVLVSLLTQQNWTRNSVQEVLLAACMALGLVLAPQVWPYFSG
YLAVMAMGFFLIELDAPLARRLRGGFDALWTVAEIVLFVLLGASLDLGVLGSVFWPGLLLLTLSLLLGRGLGWWLSTLGS
NWNGRERLFLLPGNMAKATVQAAIGGIPLAQGIPGGEIILALAALSILVTAPLGAWLTQVCAPRLLEKGEVDPTKVGSQG
KVSFLAAVDTSPLAEAVLRKVADLARRVDGEVIVLHVTDKPQGKGVELLRQLTQRLLADIRHQFCLASGPLAETIVTLAQ
ERQVTDIVMGKRGHRGWEQVLVGSTSQAVLETSPIPVILVEEEDFKRSRIPISEGRKS

Specific function: Unknown

COG id: COG0025

COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI47271479, Length=380, Percent_Identity=33.6842105263158, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI66793392, Length=369, Percent_Identity=30.3523035230352, Blast_Score=135, Evalue=7e-32,
Organism=Homo sapiens, GI154937338, Length=309, Percent_Identity=30.0970873786408, Blast_Score=109, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI25152227, Length=408, Percent_Identity=24.0196078431373, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17567635, Length=415, Percent_Identity=23.6144578313253, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI20129297, Length=407, Percent_Identity=29.7297297297297, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI45550940, Length=407, Percent_Identity=29.7297297297297, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24649169, Length=416, Percent_Identity=28.6057692307692, Blast_Score=101, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57087; Mature: 56956

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFVGQIVGRLGMPPLLGMILVGILLGDVLSPEVLAAAGDLRVVAVMIILMKAGLGLDR
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCCCH
EKLAQQGSVALRLGFLPAACEAVAVALLSTWILGLDWPTGLLLGCVIGAESPAVIVPGML
HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCHHH
RLKSLGWGVTKGIPDAILTGSALSDVLLLLGFSLLLSFLGQGSAASVRLGSLELSPLQWL
HHHHCCCCHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCHHCC
PFQVVMEILLGVAVGYLGARVLVSLLTQQNWTRNSVQEVLLAACMALGLVLAPQVWPYFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLAVMAMGFFLIELDAPLARRLRGGFDALWTVAEIVLFVLLGASLDLGVLGSVFWPGLL
HHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLTLSLLLGRGLGWWLSTLGSNWNGRERLFLLPGNMAKATVQAAIGGIPLAQGIPGGEII
HHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHCCCCCHHHH
LALAALSILVTAPLGAWLTQVCAPRLLEKGEVDPTKVGSQGKVSFLAAVDTSPLAEAVLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHH
KVADLARRVDGEVIVLHVTDKPQGKGVELLRQLTQRLLADIRHQFCLASGPLAETIVTLA
HHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QERQVTDIVMGKRGHRGWEQVLVGSTSQAVLETSPIPVILVEEEDFKRSRIPISEGRKS
HHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHCCCCCCEEEECCCCCHHHCCCHHCCCCC
>Mature Secondary Structure 
GFFVGQIVGRLGMPPLLGMILVGILLGDVLSPEVLAAAGDLRVVAVMIILMKAGLGLDR
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCCCH
EKLAQQGSVALRLGFLPAACEAVAVALLSTWILGLDWPTGLLLGCVIGAESPAVIVPGML
HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCHHH
RLKSLGWGVTKGIPDAILTGSALSDVLLLLGFSLLLSFLGQGSAASVRLGSLELSPLQWL
HHHHCCCCHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCHHCC
PFQVVMEILLGVAVGYLGARVLVSLLTQQNWTRNSVQEVLLAACMALGLVLAPQVWPYFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLAVMAMGFFLIELDAPLARRLRGGFDALWTVAEIVLFVLLGASLDLGVLGSVFWPGLL
HHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLTLSLLLGRGLGWWLSTLGSNWNGRERLFLLPGNMAKATVQAAIGGIPLAQGIPGGEII
HHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHCCCCCHHHH
LALAALSILVTAPLGAWLTQVCAPRLLEKGEVDPTKVGSQGKVSFLAAVDTSPLAEAVLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHH
KVADLARRVDGEVIVLHVTDKPQGKGVELLRQLTQRLLADIRHQFCLASGPLAETIVTLA
HHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QERQVTDIVMGKRGHRGWEQVLVGSTSQAVLETSPIPVILVEEEDFKRSRIPISEGRKS
HHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHCCCCCCEEEECCCCCHHHCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA