| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is hisIE [H]
Identifier: 86607659
GI number: 86607659
Start: 172007
End: 172630
Strand: Reverse
Name: hisIE [H]
Synonym: CYB_0157
Alternate gene names: 86607659
Gene position: 172630-172007 (Counterclockwise)
Preceding gene: 86607660
Following gene: 86607658
Centisome position: 5.67
GC content: 61.06
Gene sequence:
>624_bases ATGGCTTGGTTAGGCAGCCTCACCTACAACGAACAGGGTTTGATCCCGGCCATCGTGCAGGACTACCTGGATGGGACGGT GCTGATGATGGCCTGGATGAACCGGGAGTCCCTGCAAAAAACTTTGGAAACAGGCCGCACCTGGTTCTGGAGCCGCTCGC GGCAGGCGCTGTGGCCCAAAGGGGAAACTTCTGGCCACGTCCAGTGGGTCAAGCAAATCCGCTACGACTGCGACGGCGAC GCGCTGGTCATCCTGGTGGAGCAGGTGGGGGATGCGGCATGCCACACGGGGGCGCGGAGCTGCTTCTTCCGCCCTTTGCA AGGGGATCCCATTCCGGCAGCCGATACCCTGTCGCAGGTGTTTGCCGTCGTCAAAGCCCGCCAGGCGGATCCCCGTCCCG ATTCCTACACCAGCAGCTTGCTAGCCAAGGGGGAAAATGCCATTTTGAAGAAACTTGGCGAGGAGACGGCTGAGGTGGTG ATGGCGGCTAAGGATCAAGACCGCGTGGCTTTGGCCCGTGAGATGGCCGACCTCTGGTACCACTGCCTCGTGGCCCTTGC TCACTATCAGGTAGATGTTAGGGATGTCTATCGCCAGCTCCAAGCCCGCCGTTCCGCCAAGTGA
Upstream 100 bases:
>100_bases CTGCTAATAATCTCGATTGGTTTTCTGCCAAACCCTTATGGCTGCTGCTGTGATCTCGGGCCTCTCTTGGCAGTCCCCCA GAGCCCTTTCACCGGAGGAG
Downstream 100 bases:
>100_bases AAGGGCCATGTCCCCCGAAGGCGGTGCTCCCGCAGATCCCTCTCCGTCCTCTTGGGATCCCTCCCTGGACAAAGCCCACC TGGATTTACGAGCCGCGCGC
Product: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
Products: NA
Alternate protein names: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; Phosphoribosyl-ATP pyrophosphatase; PRA-PH [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MAWLGSLTYNEQGLIPAIVQDYLDGTVLMMAWMNRESLQKTLETGRTWFWSRSRQALWPKGETSGHVQWVKQIRYDCDGD ALVILVEQVGDAACHTGARSCFFRPLQGDPIPAADTLSQVFAVVKARQADPRPDSYTSSLLAKGENAILKKLGEETAEVV MAAKDQDRVALAREMADLWYHCLVALAHYQVDVRDVYRQLQARRSAK
Sequences:
>Translated_207_residues MAWLGSLTYNEQGLIPAIVQDYLDGTVLMMAWMNRESLQKTLETGRTWFWSRSRQALWPKGETSGHVQWVKQIRYDCDGD ALVILVEQVGDAACHTGARSCFFRPLQGDPIPAADTLSQVFAVVKARQADPRPDSYTSSLLAKGENAILKKLGEETAEVV MAAKDQDRVALAREMADLWYHCLVALAHYQVDVRDVYRQLQARRSAK >Mature_206_residues AWLGSLTYNEQGLIPAIVQDYLDGTVLMMAWMNRESLQKTLETGRTWFWSRSRQALWPKGETSGHVQWVKQIRYDCDGDA LVILVEQVGDAACHTGARSCFFRPLQGDPIPAADTLSQVFAVVKARQADPRPDSYTSSLLAKGENAILKKLGEETAEVVM AAKDQDRVALAREMADLWYHCLVALAHYQVDVRDVYRQLQARRSAK
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PRA-PH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=193, Percent_Identity=43.0051813471503, Blast_Score=144, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6319819, Length=191, Percent_Identity=34.0314136125654, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023019 - InterPro: IPR008179 - InterPro: IPR021130 - InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH; PF01503 PRA-PH [H]
EC number: =3.5.4.19; =3.6.1.31 [H]
Molecular weight: Translated: 23302; Mature: 23171
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWLGSLTYNEQGLIPAIVQDYLDGTVLMMAWMNRESLQKTLETGRTWFWSRSRQALWPK CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCEEECCCCCCCCCC GETSGHVQWVKQIRYDCDGDALVILVEQVGDAACHTGARSCFFRPLQGDPIPAADTLSQV CCCCHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHCHHHHEECCCCCCCCCHHHHHHHH FAVVKARQADPRPDSYTSSLLAKGENAILKKLGEETAEVVMAAKDQDRVALAREMADLWY HHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HCLVALAHYQVDVRDVYRQLQARRSAK HHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AWLGSLTYNEQGLIPAIVQDYLDGTVLMMAWMNRESLQKTLETGRTWFWSRSRQALWPK CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCEEECCCCCCCCCC GETSGHVQWVKQIRYDCDGDALVILVEQVGDAACHTGARSCFFRPLQGDPIPAADTLSQV CCCCHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHCHHHHEECCCCCCCCCHHHHHHHH FAVVKARQADPRPDSYTSSLLAKGENAILKKLGEETAEVVMAAKDQDRVALAREMADLWY HHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HCLVALAHYQVDVRDVYRQLQARRSAK HHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12240834 [H]