The gene/protein map for NC_011745 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86607637

Identifier: 86607637

GI number: 86607637

Start: 148418

End: 149311

Strand: Reverse

Name: 86607637

Synonym: CYB_0135

Alternate gene names: NA

Gene position: 149311-148418 (Counterclockwise)

Preceding gene: 86607638

Following gene: 86607636

Centisome position: 4.9

GC content: 56.26

Gene sequence:

>894_bases
GTGGCCTACGATAACGTCTGCAAGTACTTGGTGGAATGGTTCCCCGAGTCCTTTGCCCGGTGGCTACTGGGATCCCCTGT
TTCCTTGGCTCAGCTACAGCCGACGGAGCTGTCCACCGAGCCCATCCGAGCGGACTCTCTTATCCTGCTGCGGGCCCAAA
ACCTGATTTTGCATCTGGAGTTTCAAACCGATCCGGATCCCGACATTCCCTTGCGCATGGCCGACTACTGCCTGCGCCTG
TTCCGTCGCTATCCCGACCAGGAGGTGCGGCAGATTGTCATCTACCTAAGAAAAACCCAGTCAGAACGGGTGTACCAGAC
TTCTTTTCAACGGGGATCCCTGTCCCATCGCTTTGAGGTCTTGCGCCTGTGGGAACAAGATCCGGAGGTGCTGTCTCAAT
ATCCAGGACTCCTGCCTTTAGCCGTGTTGGCAGATCCGGAAAACCCGGAGCCGCGACTCCGCCAAGTGGCCAGAGCAATA
GCAGAGATAGAGGATCCAAAGCTACGGCAAGAGGTGAAAGCGGCCACTGCTGTTTTGGCAGGATTAACATGGACGCCAGA
GGAAATTAGCAGGGTACTGGGAGGTCTGGCTGTGCGGGAATCGACCATCTATCAGATGTGGCGAGCAGAAGCCCTCAAAG
AAGGGCGAGAGGAGGGCCTGAAACAAGGTCTAGAGCAAGGTCTGCAACAGGGTCTGCAGCAAGGTCTGCAGCAAGAAGCA
GCTCGACTGACTCTGAGTCAACTGCGGCGCAAGCTGGGATCTTTGCCGGAAGACCTGTCTGAAACCATCCGCCTCTTACC
TACCGAGCAACTGGAGGCTTTGGCGGAAGCGCTGTTGGACTTCCAAACCCTGGCCGATTTGATCCAATGGCTCAGGGAGT
CATCATCCAACTAG

Upstream 100 bases:

>100_bases
AGGGGCTAACCAACTGGAAAACCGCATCAACCAAGGGTACTACGGCTGATCTCGGCAGAGGGGCCATCGGGAGAATCGGC
TTTTGTAGGAAAGGGATCCT

Downstream 100 bases:

>100_bases
GGTTTGCCGTCGCGGCCTTTTCCAACCTCACAGGACTCTGTGGGTGAGTTAGGATCCCTGTTACTCAGATGGACTCGATG
AAACGGCCACAGGTTTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MAYDNVCKYLVEWFPESFARWLLGSPVSLAQLQPTELSTEPIRADSLILLRAQNLILHLEFQTDPDPDIPLRMADYCLRL
FRRYPDQEVRQIVIYLRKTQSERVYQTSFQRGSLSHRFEVLRLWEQDPEVLSQYPGLLPLAVLADPENPEPRLRQVARAI
AEIEDPKLRQEVKAATAVLAGLTWTPEEISRVLGGLAVRESTIYQMWRAEALKEGREEGLKQGLEQGLQQGLQQGLQQEA
ARLTLSQLRRKLGSLPEDLSETIRLLPTEQLEALAEALLDFQTLADLIQWLRESSSN

Sequences:

>Translated_297_residues
MAYDNVCKYLVEWFPESFARWLLGSPVSLAQLQPTELSTEPIRADSLILLRAQNLILHLEFQTDPDPDIPLRMADYCLRL
FRRYPDQEVRQIVIYLRKTQSERVYQTSFQRGSLSHRFEVLRLWEQDPEVLSQYPGLLPLAVLADPENPEPRLRQVARAI
AEIEDPKLRQEVKAATAVLAGLTWTPEEISRVLGGLAVRESTIYQMWRAEALKEGREEGLKQGLEQGLQQGLQQGLQQEA
ARLTLSQLRRKLGSLPEDLSETIRLLPTEQLEALAEALLDFQTLADLIQWLRESSSN
>Mature_296_residues
AYDNVCKYLVEWFPESFARWLLGSPVSLAQLQPTELSTEPIRADSLILLRAQNLILHLEFQTDPDPDIPLRMADYCLRLF
RRYPDQEVRQIVIYLRKTQSERVYQTSFQRGSLSHRFEVLRLWEQDPEVLSQYPGLLPLAVLADPENPEPRLRQVARAIA
EIEDPKLRQEVKAATAVLAGLTWTPEEISRVLGGLAVRESTIYQMWRAEALKEGREEGLKQGLEQGLQQGLQQGLQQEAA
RLTLSQLRRKLGSLPEDLSETIRLLPTEQLEALAEALLDFQTLADLIQWLRESSSN

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34055; Mature: 33924

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYDNVCKYLVEWFPESFARWLLGSPVSLAQLQPTELSTEPIRADSLILLRAQNLILHLE
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHEEECCEEEEEE
FQTDPDPDIPLRMADYCLRLFRRYPDQEVRQIVIYLRKTQSERVYQTSFQRGSLSHRFEV
ECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHH
LRLWEQDPEVLSQYPGLLPLAVLADPENPEPRLRQVARAIAEIEDPKLRQEVKAATAVLA
HHHHHCCHHHHHHCCCCCEEHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GLTWTPEEISRVLGGLAVRESTIYQMWRAEALKEGREEGLKQGLEQGLQQGLQQGLQQEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLTLSQLRRKLGSLPEDLSETIRLLPTEQLEALAEALLDFQTLADLIQWLRESSSN
HHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AYDNVCKYLVEWFPESFARWLLGSPVSLAQLQPTELSTEPIRADSLILLRAQNLILHLE
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHEEECCEEEEEE
FQTDPDPDIPLRMADYCLRLFRRYPDQEVRQIVIYLRKTQSERVYQTSFQRGSLSHRFEV
ECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHH
LRLWEQDPEVLSQYPGLLPLAVLADPENPEPRLRQVARAIAEIEDPKLRQEVKAATAVLA
HHHHHCCHHHHHHCCCCCEEHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GLTWTPEEISRVLGGLAVRESTIYQMWRAEALKEGREEGLKQGLEQGLQQGLQQGLQQEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLTLSQLRRKLGSLPEDLSETIRLLPTEQLEALAEALLDFQTLADLIQWLRESSSN
HHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA