| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607637
Identifier: 86607637
GI number: 86607637
Start: 148418
End: 149311
Strand: Reverse
Name: 86607637
Synonym: CYB_0135
Alternate gene names: NA
Gene position: 149311-148418 (Counterclockwise)
Preceding gene: 86607638
Following gene: 86607636
Centisome position: 4.9
GC content: 56.26
Gene sequence:
>894_bases GTGGCCTACGATAACGTCTGCAAGTACTTGGTGGAATGGTTCCCCGAGTCCTTTGCCCGGTGGCTACTGGGATCCCCTGT TTCCTTGGCTCAGCTACAGCCGACGGAGCTGTCCACCGAGCCCATCCGAGCGGACTCTCTTATCCTGCTGCGGGCCCAAA ACCTGATTTTGCATCTGGAGTTTCAAACCGATCCGGATCCCGACATTCCCTTGCGCATGGCCGACTACTGCCTGCGCCTG TTCCGTCGCTATCCCGACCAGGAGGTGCGGCAGATTGTCATCTACCTAAGAAAAACCCAGTCAGAACGGGTGTACCAGAC TTCTTTTCAACGGGGATCCCTGTCCCATCGCTTTGAGGTCTTGCGCCTGTGGGAACAAGATCCGGAGGTGCTGTCTCAAT ATCCAGGACTCCTGCCTTTAGCCGTGTTGGCAGATCCGGAAAACCCGGAGCCGCGACTCCGCCAAGTGGCCAGAGCAATA GCAGAGATAGAGGATCCAAAGCTACGGCAAGAGGTGAAAGCGGCCACTGCTGTTTTGGCAGGATTAACATGGACGCCAGA GGAAATTAGCAGGGTACTGGGAGGTCTGGCTGTGCGGGAATCGACCATCTATCAGATGTGGCGAGCAGAAGCCCTCAAAG AAGGGCGAGAGGAGGGCCTGAAACAAGGTCTAGAGCAAGGTCTGCAACAGGGTCTGCAGCAAGGTCTGCAGCAAGAAGCA GCTCGACTGACTCTGAGTCAACTGCGGCGCAAGCTGGGATCTTTGCCGGAAGACCTGTCTGAAACCATCCGCCTCTTACC TACCGAGCAACTGGAGGCTTTGGCGGAAGCGCTGTTGGACTTCCAAACCCTGGCCGATTTGATCCAATGGCTCAGGGAGT CATCATCCAACTAG
Upstream 100 bases:
>100_bases AGGGGCTAACCAACTGGAAAACCGCATCAACCAAGGGTACTACGGCTGATCTCGGCAGAGGGGCCATCGGGAGAATCGGC TTTTGTAGGAAAGGGATCCT
Downstream 100 bases:
>100_bases GGTTTGCCGTCGCGGCCTTTTCCAACCTCACAGGACTCTGTGGGTGAGTTAGGATCCCTGTTACTCAGATGGACTCGATG AAACGGCCACAGGTTTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MAYDNVCKYLVEWFPESFARWLLGSPVSLAQLQPTELSTEPIRADSLILLRAQNLILHLEFQTDPDPDIPLRMADYCLRL FRRYPDQEVRQIVIYLRKTQSERVYQTSFQRGSLSHRFEVLRLWEQDPEVLSQYPGLLPLAVLADPENPEPRLRQVARAI AEIEDPKLRQEVKAATAVLAGLTWTPEEISRVLGGLAVRESTIYQMWRAEALKEGREEGLKQGLEQGLQQGLQQGLQQEA ARLTLSQLRRKLGSLPEDLSETIRLLPTEQLEALAEALLDFQTLADLIQWLRESSSN
Sequences:
>Translated_297_residues MAYDNVCKYLVEWFPESFARWLLGSPVSLAQLQPTELSTEPIRADSLILLRAQNLILHLEFQTDPDPDIPLRMADYCLRL FRRYPDQEVRQIVIYLRKTQSERVYQTSFQRGSLSHRFEVLRLWEQDPEVLSQYPGLLPLAVLADPENPEPRLRQVARAI AEIEDPKLRQEVKAATAVLAGLTWTPEEISRVLGGLAVRESTIYQMWRAEALKEGREEGLKQGLEQGLQQGLQQGLQQEA ARLTLSQLRRKLGSLPEDLSETIRLLPTEQLEALAEALLDFQTLADLIQWLRESSSN >Mature_296_residues AYDNVCKYLVEWFPESFARWLLGSPVSLAQLQPTELSTEPIRADSLILLRAQNLILHLEFQTDPDPDIPLRMADYCLRLF RRYPDQEVRQIVIYLRKTQSERVYQTSFQRGSLSHRFEVLRLWEQDPEVLSQYPGLLPLAVLADPENPEPRLRQVARAIA EIEDPKLRQEVKAATAVLAGLTWTPEEISRVLGGLAVRESTIYQMWRAEALKEGREEGLKQGLEQGLQQGLQQGLQQEAA RLTLSQLRRKLGSLPEDLSETIRLLPTEQLEALAEALLDFQTLADLIQWLRESSSN
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34055; Mature: 33924
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYDNVCKYLVEWFPESFARWLLGSPVSLAQLQPTELSTEPIRADSLILLRAQNLILHLE CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHEEECCEEEEEE FQTDPDPDIPLRMADYCLRLFRRYPDQEVRQIVIYLRKTQSERVYQTSFQRGSLSHRFEV ECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHH LRLWEQDPEVLSQYPGLLPLAVLADPENPEPRLRQVARAIAEIEDPKLRQEVKAATAVLA HHHHHCCHHHHHHCCCCCEEHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GLTWTPEEISRVLGGLAVRESTIYQMWRAEALKEGREEGLKQGLEQGLQQGLQQGLQQEA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLTLSQLRRKLGSLPEDLSETIRLLPTEQLEALAEALLDFQTLADLIQWLRESSSN HHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AYDNVCKYLVEWFPESFARWLLGSPVSLAQLQPTELSTEPIRADSLILLRAQNLILHLE CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHEEECCEEEEEE FQTDPDPDIPLRMADYCLRLFRRYPDQEVRQIVIYLRKTQSERVYQTSFQRGSLSHRFEV ECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHH LRLWEQDPEVLSQYPGLLPLAVLADPENPEPRLRQVARAIAEIEDPKLRQEVKAATAVLA HHHHHCCHHHHHHCCCCCEEHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GLTWTPEEISRVLGGLAVRESTIYQMWRAEALKEGREEGLKQGLEQGLQQGLQQGLQQEA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLTLSQLRRKLGSLPEDLSETIRLLPTEQLEALAEALLDFQTLADLIQWLRESSSN HHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA