| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607636
Identifier: 86607636
GI number: 86607636
Start: 147255
End: 148340
Strand: Reverse
Name: 86607636
Synonym: CYB_0134
Alternate gene names: NA
Gene position: 148340-147255 (Counterclockwise)
Preceding gene: 86607637
Following gene: 86607634
Centisome position: 4.87
GC content: 61.51
Gene sequence:
>1086_bases ATGAAACGGCCACAGGTTTTGATCTGTGGCTACTACGGCTACGGCAATGCCGGCGATGAGGCGTTGTTGGTGGCTCTCTT ACGAGAGCTAGAGCAGTTGCCCAGCCCCGTACAGCCGGTGGTGCTCTCCCGTCGCCCTGCCGAAACGGCTGCCACCTATG GGGTGCTGGCCTATCCGCGCTTCAACAGTTTGGCTTTACGGCGCTGTCTCCAGGAGGCCCAGGCTTTCATCTGGGGTGGA GGTGGCCTGCTGCAGGATCGCACCAGTTGGCGCAGCCCTCTCTACTACCTGGGGGTGATGGGCCTAGCCCAGCGATGGGG GCTAAGAACCGTTGCCTGGGCCCAGGGGATCGGGCCGCTGCAGCGGGGGTGGATTCGCGCACTAGCCCGTCGCTCGTTGG CAGGTTGCACGGCCATCAGTGTGCGGGATGGGGTTGCCTCCCAATGGCTGCAAGAGTGGGGGATCCCTCACCAGGTGGCT CCGGATCCCGTCTGGAGTTTGCCGTCCAAAACCTTGCCGGAATGGGAAACGTGGCCTCAGCCCCGCATTGCTGTGGTCTT GCGTCCGCATCCGCAACTGACTGGAGCCTGTCTAGAAGCTTTGAGCCAGGGTTTACAGCGTCTCCAGGCTTCCACGGGGG CATACCTTCTCTTCGTGCCCTTTCAGCTGGCTCCTCCCGGATCCCCTGACCTTGGGCCAGACTACCACTTGGCTCAGCAG CTTCAGCAGCGCCTACCCCACCGTAGCCAAGTGCTGGAAATTCGGGATCCCTGTCTATTGAAAGGAGTCTTTCGGGGTGT CAGGCTGGCGATCACCATGCGCTACCACGGATTGGTGATGGCGGCGGCAGAGGGCTGCGCCTGTTTTGGTCTCAGCTACG ATCCCAAGGTGAAAACGCTGCTCCAGGAATTGGGCATGCCTGGCTGGGATCTGCAGGAGATGCCCACCGATCCTGAAGCC TTACACCAAGCTTGGCTGGCCTGCTACTCAGAGAGCCTAGCTCTCAGCCCTGCCCAAGCTGACCTGTGGGCGAGGCAATC GGCTCAGCACGCTCAGTTGTTGAGACAGCACCTGAAGTGGGGTTGA
Upstream 100 bases:
>100_bases TCAGGGAGTCATCATCCAACTAGGGTTTGCCGTCGCGGCCTTTTCCAACCTCACAGGACTCTGTGGGTGAGTTAGGATCC CTGTTACTCAGATGGACTCG
Downstream 100 bases:
>100_bases TGGGGTTGCCTGGAGAAGTTGCTGCCAGGGCGAATTCCGGTAGCGGTTCTTCTGGAGAGCTGCTTTACCCCAAAAGTAGG GAGGCACGGTGTCCCCGAAC
Product: polysaccharide pyruvyl-transferase
Products: NA
Alternate protein names: Polysaccharide Pyruvyl Transferase CsaB; Pyruvyl-Transferase; Polysaccharide Pyruvyl Transferase Csab; Polysaccharide Pyruvyl Transferase Superfamily; Polysaccharide Pyruvyl Transferase Family; Polysaccharide Pyruvyl Transferase Superfamily Protein; Polysaccharide Pyruvyl Transferase Family Protein; CsaB Protein; Glycosyl Transferase WecB/TagA/CpsF Family; Polysaccharide Pyruvyl-Transferase; WecB/TagA/CpsF Family Glycosyl Transferase
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MKRPQVLICGYYGYGNAGDEALLVALLRELEQLPSPVQPVVLSRRPAETAATYGVLAYPRFNSLALRRCLQEAQAFIWGG GGLLQDRTSWRSPLYYLGVMGLAQRWGLRTVAWAQGIGPLQRGWIRALARRSLAGCTAISVRDGVASQWLQEWGIPHQVA PDPVWSLPSKTLPEWETWPQPRIAVVLRPHPQLTGACLEALSQGLQRLQASTGAYLLFVPFQLAPPGSPDLGPDYHLAQQ LQQRLPHRSQVLEIRDPCLLKGVFRGVRLAITMRYHGLVMAAAEGCACFGLSYDPKVKTLLQELGMPGWDLQEMPTDPEA LHQAWLACYSESLALSPAQADLWARQSAQHAQLLRQHLKWG
Sequences:
>Translated_361_residues MKRPQVLICGYYGYGNAGDEALLVALLRELEQLPSPVQPVVLSRRPAETAATYGVLAYPRFNSLALRRCLQEAQAFIWGG GGLLQDRTSWRSPLYYLGVMGLAQRWGLRTVAWAQGIGPLQRGWIRALARRSLAGCTAISVRDGVASQWLQEWGIPHQVA PDPVWSLPSKTLPEWETWPQPRIAVVLRPHPQLTGACLEALSQGLQRLQASTGAYLLFVPFQLAPPGSPDLGPDYHLAQQ LQQRLPHRSQVLEIRDPCLLKGVFRGVRLAITMRYHGLVMAAAEGCACFGLSYDPKVKTLLQELGMPGWDLQEMPTDPEA LHQAWLACYSESLALSPAQADLWARQSAQHAQLLRQHLKWG >Mature_361_residues MKRPQVLICGYYGYGNAGDEALLVALLRELEQLPSPVQPVVLSRRPAETAATYGVLAYPRFNSLALRRCLQEAQAFIWGG GGLLQDRTSWRSPLYYLGVMGLAQRWGLRTVAWAQGIGPLQRGWIRALARRSLAGCTAISVRDGVASQWLQEWGIPHQVA PDPVWSLPSKTLPEWETWPQPRIAVVLRPHPQLTGACLEALSQGLQRLQASTGAYLLFVPFQLAPPGSPDLGPDYHLAQQ LQQRLPHRSQVLEIRDPCLLKGVFRGVRLAITMRYHGLVMAAAEGCACFGLSYDPKVKTLLQELGMPGWDLQEMPTDPEA LHQAWLACYSESLALSPAQADLWARQSAQHAQLLRQHLKWG
Specific function: Unknown
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40086; Mature: 40086
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRPQVLICGYYGYGNAGDEALLVALLRELEQLPSPVQPVVLSRRPAETAATYGVLAYPR CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHCCEEECCC FNSLALRRCLQEAQAFIWGGGGLLQDRTSWRSPLYYLGVMGLAQRWGLRTVAWAQGIGPL CHHHHHHHHHHHHHHEEECCCCCCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCHH QRGWIRALARRSLAGCTAISVRDGVASQWLQEWGIPHQVAPDPVWSLPSKTLPEWETWPQ HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRIAVVLRPHPQLTGACLEALSQGLQRLQASTGAYLLFVPFQLAPPGSPDLGPDYHLAQQ CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHH LQQRLPHRSQVLEIRDPCLLKGVFRGVRLAITMRYHGLVMAAAEGCACFGLSYDPKVKTL HHHHCCCHHHHHHHCCHHHHHHHHHHHEEEEEEEHHCEEEECCCCCEEECCCCCHHHHHH LQELGMPGWDLQEMPTDPEALHQAWLACYSESLALSPAQADLWARQSAQHAQLLRQHLKW HHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC G C >Mature Secondary Structure MKRPQVLICGYYGYGNAGDEALLVALLRELEQLPSPVQPVVLSRRPAETAATYGVLAYPR CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHCCEEECCC FNSLALRRCLQEAQAFIWGGGGLLQDRTSWRSPLYYLGVMGLAQRWGLRTVAWAQGIGPL CHHHHHHHHHHHHHHEEECCCCCCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCHH QRGWIRALARRSLAGCTAISVRDGVASQWLQEWGIPHQVAPDPVWSLPSKTLPEWETWPQ HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRIAVVLRPHPQLTGACLEALSQGLQRLQASTGAYLLFVPFQLAPPGSPDLGPDYHLAQQ CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHH LQQRLPHRSQVLEIRDPCLLKGVFRGVRLAITMRYHGLVMAAAEGCACFGLSYDPKVKTL HHHHCCCHHHHHHHCCHHHHHHHHHHHEEEEEEEHHCEEEECCCCCEEECCCCCHHHHHH LQELGMPGWDLQEMPTDPEALHQAWLACYSESLALSPAQADLWARQSAQHAQLLRQHLKW HHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA