Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is yqeK [H]

Identifier: 86607565

GI number: 86607565

Start: 74616

End: 75209

Strand: Reverse

Name: yqeK [H]

Synonym: CYB_0063

Alternate gene names: 86607565

Gene position: 75209-74616 (Counterclockwise)

Preceding gene: 86607566

Following gene: 86607564

Centisome position: 2.47

GC content: 57.91

Gene sequence:

>594_bases
ATGGGCACTCAACTGGGGCGGGAAGAGGTGTTGGCCTGGCTACAGGAGCGGGTGTCTCCTCCTCGCCTCCGCCATATCTT
GGGGGTAGAGGGGATGGCCCGACAGCTGGCGGCCCACTACGGGCTGGATGAGCAGAAAGCTGCTTGGGCAGGGCTGATGC
ACGACTTGGCCAAGGCTTTCCCGCCGGAGCAACTGTTGCAAAGGGTGGCTCAGGAACGGGAGCTGGATGAAATTGAGCGG
GCCGAACCTCACATCCTGCACGCTGAGGTGGGATCCCTGGTGGCGCGGGAGCAGTTTCAGGTACAGGATCCGGAGATTTT
GGCGGCCATTGCCAACCACACGCTAGGGCAGCCCGGCATGGATCCCCTCAGTTGCGTGGTTTTCGTGGCCGATGCCCTGG
AGCCGAATCGGGGCAGCAACCCAGAATTGGAGCGGTTGCGGCAGATGGCTTTTGTAGATTTGTCTAAAACCGTAGTGGGA
GTATGTGACTTGAGCCTAAAATTTTTGCTAGACCGGAATCAGGTGGTTCATCCGCGCACGCTCATGACTCGGAATCATTT
TTTGTTACATCCTTTAGAAAAAGCGGTGTCCTAG

Upstream 100 bases:

>100_bases
AAACAAAAAGAGGGGAAAAAACGCATGAAGGCGGTGGGAACGGTGGATGTGCCCCAAGAAGCGTTTATGGCCGTGCTGAA
GCTGCAGAATGACTAGGGCG

Downstream 100 bases:

>100_bases
GTTAGCTCAGTCGTTTCAGGAGGGTTTTAGTTGCTACATCTCATGCCTGCCCCTGCTGGGGATCCCATCTATTGCATGGC
GCTGAGTGCAGCTCGCGCGG

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MGTQLGREEVLAWLQERVSPPRLRHILGVEGMARQLAAHYGLDEQKAAWAGLMHDLAKAFPPEQLLQRVAQERELDEIER
AEPHILHAEVGSLVAREQFQVQDPEILAAIANHTLGQPGMDPLSCVVFVADALEPNRGSNPELERLRQMAFVDLSKTVVG
VCDLSLKFLLDRNQVVHPRTLMTRNHFLLHPLEKAVS

Sequences:

>Translated_197_residues
MGTQLGREEVLAWLQERVSPPRLRHILGVEGMARQLAAHYGLDEQKAAWAGLMHDLAKAFPPEQLLQRVAQERELDEIER
AEPHILHAEVGSLVAREQFQVQDPEILAAIANHTLGQPGMDPLSCVVFVADALEPNRGSNPELERLRQMAFVDLSKTVVG
VCDLSLKFLLDRNQVVHPRTLMTRNHFLLHPLEKAVS
>Mature_196_residues
GTQLGREEVLAWLQERVSPPRLRHILGVEGMARQLAAHYGLDEQKAAWAGLMHDLAKAFPPEQLLQRVAQERELDEIERA
EPHILHAEVGSLVAREQFQVQDPEILAAIANHTLGQPGMDPLSCVVFVADALEPNRGSNPELERLRQMAFVDLSKTVVGV
CDLSLKFLLDRNQVVHPRTLMTRNHFLLHPLEKAVS

Specific function: Unknown

COG id: COG1713

COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005249
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22107; Mature: 21976

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTQLGREEVLAWLQERVSPPRLRHILGVEGMARQLAAHYGLDEQKAAWAGLMHDLAKAF
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
PPEQLLQRVAQERELDEIERAEPHILHAEVGSLVAREQFQVQDPEILAAIANHTLGQPGM
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
DPLSCVVFVADALEPNRGSNPELERLRQMAFVDLSKTVVGVCDLSLKFLLDRNQVVHPRT
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LMTRNHFLLHPLEKAVS
HHHCCCHHCCHHHHHCC
>Mature Secondary Structure 
GTQLGREEVLAWLQERVSPPRLRHILGVEGMARQLAAHYGLDEQKAAWAGLMHDLAKAF
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
PPEQLLQRVAQERELDEIERAEPHILHAEVGSLVAREQFQVQDPEILAAIANHTLGQPGM
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
DPLSCVVFVADALEPNRGSNPELERLRQMAFVDLSKTVVGVCDLSLKFLLDRNQVVHPRT
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LMTRNHFLLHPLEKAVS
HHHCCCHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]