Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is wbbJ [C]
Identifier: 86361116
GI number: 86361116
Start: 437443
End: 439095
Strand: Direct
Name: wbbJ [C]
Synonym: RHE_PF00386
Alternate gene names: 86361116
Gene position: 437443-439095 (Clockwise)
Preceding gene: 86361115
Following gene: 86361118
Centisome position: 68.08
GC content: 63.64
Gene sequence:
>1653_bases ATGGACCAAGCCAATAGCGTCCCCTTATCGGCAGATGAACAGCGCGAGGCGCGTCGGCTGCAATATCTCTCCTGGGAGCG TGTCGCGGCGGATCTCGATCATCCCGCTCACCTTGCCCGCAAGGCGGAGCTTCGGCGGTCATGCGGCGCCGAATTGGCCG AGACGTCCTATATCGCGGAAAATGCTGCGATCTTTACCGAGAGCCTGACGATGGGCGAATGGTCCTGGATTGCAGGGCAT GCGCTCGTACGAGGTGACGTCATCCTCGGCGAGCATTGCTCGATCAATCCCTATGCCTGCGTTTCCGGCAAGGTGACCTG CGGCAATGGGGTCAGGATTGCCTCCCATGCCTCGATCGTCGGCTTCAATCATGGCTTCGACGATCCCGATCGGCCCATCC ATCGTCAGGGCGTCGTCAGCATCGGCATCATCATCGGCGACGATGTCTGGATCGGCGCCAATTGCGTGATCCTTGATGGC GTTACGATCGGCAACGGCGCCGTGATCGCCGCCGGAGCGGTGGTCACGCAAGACATTCCCTCGCTGGCGATTGCCGGTGG CGTACCGGCAAAGGTGCTGCGCAATCGCGGCGCGCCGGCCAGGAAATCCGCCGTAAGAGACATCGAAGATCAATTGGCCA GGCTCGGGCAGAAGGCGAAAGAGCAATGGCCCGATATTCTTGCGCACTGGAAGACATCTGAGGGCTATGAATCGCTGGAA GCGGACGGCGTCAGGCGGCCGTCGATCCGGCACCTCTGCGATGCCATCGAGATTGCGGCCGGCTTCGGTCATCCGCCGCC CGGGCTCGATCCGGCGCAGACTCTCGAGCGTCTCCAGGGTCTTCAGGATCGGGAGACCGGCCTCTTTCCGGAGGCGCATT CGCGTGTAGAGGGCCGGGCTCTGAGGGTGGATCCGAAGGCGCTCTATAATGTGCTTTCGGTCGGCTATGCGCTCGAGCTG CTCGGCTCCGGGCCACAGCAACCGATCCAGGCGGTTCAGATCGATGCCCCGGAGCTGGAGCAATGGCTGAGCGCCCTTCC CTGGTCGAGCCGGGCATGGCACGCCGGCAGCGTCGTCGATACGATCGGAACCGCTATGTATTTTAATGCCAGGCATTTCG GCATCAGGGGGCCGAGGCAGGCGCTCTTCGAGTGGCTGAGCCGCAATGCCGACAGCGTCTCCGGCCTCTGGGGCGAGCCG ACGGCGCTGGAGGGGTGGCTCCAGCCGGTGAACGGCTTTTACCGCCTGACGCGCGGCACCTATGCTCAGTTCGGCATGCC GCTTCCGCACCCGCACGCCGCGCTCGAAGCGGTTCATCTGAATTATCGCAATCACAACGGTTTCGTCGGCGGGCAATACA ATGCCTGCAACCTGCTCGACACGATCCATCCGCTGCTGCTGATCGCCCGGCAGACCGATTACAGGCGGGCCGATGGCGAG GCGATCGCCCGCAGCCTGATCTCGCGGGCGCCGGACCGATGGCGGGATGGCGAAGGTTTCCCGTTCGCTGACGGCGGCGA ACCGAGCCTGCAGGGAACGGAAATGTGGCTGTCGGTCGTGCACCTGGCGGCTGATTTCCTCGGGCTGGCGGATCAATTCG CTTTCGTTCCGAAGGGCGTTCATCGAACGGCGACACCCGGCCTCGGCCTCTGA
Upstream 100 bases:
>100_bases GCTGGGACAAATTCGGATCGGGCCTTTCATGAAGGAAGACGGCCGCCGACAGTCCTGCTAAGCCGATATTCGGCGATTGA AGCTGCGTGCGAGGATCAAG
Downstream 100 bases:
>100_bases TCAGCCGTGCAGCGAGGCTGTCAGCCAGGCGGCGGCGAGATCGCCCGCATGGCTGCGCTTGGCCTTGATCGGCACGATCA CGTTGTAGCGGCCTTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MDQANSVPLSADEQREARRLQYLSWERVAADLDHPAHLARKAELRRSCGAELAETSYIAENAAIFTESLTMGEWSWIAGH ALVRGDVILGEHCSINPYACVSGKVTCGNGVRIASHASIVGFNHGFDDPDRPIHRQGVVSIGIIIGDDVWIGANCVILDG VTIGNGAVIAAGAVVTQDIPSLAIAGGVPAKVLRNRGAPARKSAVRDIEDQLARLGQKAKEQWPDILAHWKTSEGYESLE ADGVRRPSIRHLCDAIEIAAGFGHPPPGLDPAQTLERLQGLQDRETGLFPEAHSRVEGRALRVDPKALYNVLSVGYALEL LGSGPQQPIQAVQIDAPELEQWLSALPWSSRAWHAGSVVDTIGTAMYFNARHFGIRGPRQALFEWLSRNADSVSGLWGEP TALEGWLQPVNGFYRLTRGTYAQFGMPLPHPHAALEAVHLNYRNHNGFVGGQYNACNLLDTIHPLLLIARQTDYRRADGE AIARSLISRAPDRWRDGEGFPFADGGEPSLQGTEMWLSVVHLAADFLGLADQFAFVPKGVHRTATPGLGL
Sequences:
>Translated_550_residues MDQANSVPLSADEQREARRLQYLSWERVAADLDHPAHLARKAELRRSCGAELAETSYIAENAAIFTESLTMGEWSWIAGH ALVRGDVILGEHCSINPYACVSGKVTCGNGVRIASHASIVGFNHGFDDPDRPIHRQGVVSIGIIIGDDVWIGANCVILDG VTIGNGAVIAAGAVVTQDIPSLAIAGGVPAKVLRNRGAPARKSAVRDIEDQLARLGQKAKEQWPDILAHWKTSEGYESLE ADGVRRPSIRHLCDAIEIAAGFGHPPPGLDPAQTLERLQGLQDRETGLFPEAHSRVEGRALRVDPKALYNVLSVGYALEL LGSGPQQPIQAVQIDAPELEQWLSALPWSSRAWHAGSVVDTIGTAMYFNARHFGIRGPRQALFEWLSRNADSVSGLWGEP TALEGWLQPVNGFYRLTRGTYAQFGMPLPHPHAALEAVHLNYRNHNGFVGGQYNACNLLDTIHPLLLIARQTDYRRADGE AIARSLISRAPDRWRDGEGFPFADGGEPSLQGTEMWLSVVHLAADFLGLADQFAFVPKGVHRTATPGLGL >Mature_550_residues MDQANSVPLSADEQREARRLQYLSWERVAADLDHPAHLARKAELRRSCGAELAETSYIAENAAIFTESLTMGEWSWIAGH ALVRGDVILGEHCSINPYACVSGKVTCGNGVRIASHASIVGFNHGFDDPDRPIHRQGVVSIGIIIGDDVWIGANCVILDG VTIGNGAVIAAGAVVTQDIPSLAIAGGVPAKVLRNRGAPARKSAVRDIEDQLARLGQKAKEQWPDILAHWKTSEGYESLE ADGVRRPSIRHLCDAIEIAAGFGHPPPGLDPAQTLERLQGLQDRETGLFPEAHSRVEGRALRVDPKALYNVLSVGYALEL LGSGPQQPIQAVQIDAPELEQWLSALPWSSRAWHAGSVVDTIGTAMYFNARHFGIRGPRQALFEWLSRNADSVSGLWGEP TALEGWLQPVNGFYRLTRGTYAQFGMPLPHPHAALEAVHLNYRNHNGFVGGQYNACNLLDTIHPLLLIARQTDYRRADGE AIARSLISRAPDRWRDGEGFPFADGGEPSLQGTEMWLSVVHLAADFLGLADQFAFVPKGVHRTATPGLGL
Specific function: Putative O-Acetyltransferase That Transfers An O-Acetyl Group To The O Antigen. [C]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1788345, Length=148, Percent_Identity=32.4324324324324, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1786537, Length=95, Percent_Identity=41.0526315789474, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322243, Length=92, Percent_Identity=43.4782608695652, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 59691; Mature: 59691
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQANSVPLSADEQREARRLQYLSWERVAADLDHPAHLARKAELRRSCGAELAETSYIAE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH NAAIFTESLTMGEWSWIAGHALVRGDVILGEHCSINPYACVSGKVTCGNGVRIASHASIV CHHHHHHCCCCCCCHHHHCCCEEECCEEECCCCCCCCEEEECCEEECCCCEEEECCCEEE GFNHGFDDPDRPIHRQGVVSIGIIIGDDVWIGANCVILDGVTIGNGAVIAAGAVVTQDIP ECCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCEEEEECEEECCCCEEEECHHHHHCCC SLAIAGGVPAKVLRNRGAPARKSAVRDIEDQLARLGQKAKEQWPDILAHWKTSEGYESLE CHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ADGVRRPSIRHLCDAIEIAAGFGHPPPGLDPAQTLERLQGLQDRETGLFPEAHSRVEGRA HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCHHHHCCCCCE LRVDPKALYNVLSVGYALELLGSGPQQPIQAVQIDAPELEQWLSALPWSSRAWHAGSVVD EEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHH TIGTAMYFNARHFGIRGPRQALFEWLSRNADSVSGLWGEPTALEGWLQPVNGFYRLTRGT HHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC YAQFGMPLPHPHAALEAVHLNYRNHNGFVGGQYNACNLLDTIHPLLLIARQTDYRRADGE HHHCCCCCCCCHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH AIARSLISRAPDRWRDGEGFPFADGGEPSLQGTEMWLSVVHLAADFLGLADQFAFVPKGV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HRTATPGLGL CCCCCCCCCC >Mature Secondary Structure MDQANSVPLSADEQREARRLQYLSWERVAADLDHPAHLARKAELRRSCGAELAETSYIAE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH NAAIFTESLTMGEWSWIAGHALVRGDVILGEHCSINPYACVSGKVTCGNGVRIASHASIV CHHHHHHCCCCCCCHHHHCCCEEECCEEECCCCCCCCEEEECCEEECCCCEEEECCCEEE GFNHGFDDPDRPIHRQGVVSIGIIIGDDVWIGANCVILDGVTIGNGAVIAAGAVVTQDIP ECCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCEEEEECEEECCCCEEEECHHHHHCCC SLAIAGGVPAKVLRNRGAPARKSAVRDIEDQLARLGQKAKEQWPDILAHWKTSEGYESLE CHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ADGVRRPSIRHLCDAIEIAAGFGHPPPGLDPAQTLERLQGLQDRETGLFPEAHSRVEGRA HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCHHHHCCCCCE LRVDPKALYNVLSVGYALELLGSGPQQPIQAVQIDAPELEQWLSALPWSSRAWHAGSVVD EEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHH TIGTAMYFNARHFGIRGPRQALFEWLSRNADSVSGLWGEPTALEGWLQPVNGFYRLTRGT HHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC YAQFGMPLPHPHAALEAVHLNYRNHNGFVGGQYNACNLLDTIHPLLLIARQTDYRRADGE HHHCCCCCCCCHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH AIARSLISRAPDRWRDGEGFPFADGGEPSLQGTEMWLSVVHLAADFLGLADQFAFVPKGV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HRTATPGLGL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]