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The map label for this gene is yeaW [H]

Identifier: 86361118

GI number: 86361118

Start: 440095

End: 441348

Strand: Direct

Name: yeaW [H]

Synonym: RHE_PF00388

Alternate gene names: 86361118

Gene position: 440095-441348 (Clockwise)

Preceding gene: 86361116

Following gene: 86361119

Centisome position: 68.5

GC content: 61.32

Gene sequence:

>1254_bases
ATGCTAGACAGGCTTCCTTCTTCCATTTCGGCGCTTCTGGACTCCCGCGCGGAAGGCCATTCGCTGCCGGCCGGCCTCTA
CATTAGAGAAGACGTGTTCGAAGCGGATATCGATGTCTTCTTCCACAAGCACTGGATCTGCGTCGGCCTCGACTGCGATG
TTCCGGAGCCCGGCGACGCCACGGTCGTCGACATCGGCAAAACGAGCCTGATCCTGCTGCGCGACGACGACGGCGAAATC
CGCGCGCTGCACAATGTCTGCCGCCACCGCGGCTCCCGTCTTCTCAGCCCGGGCAAGACGATCGTTTCGAAGCTCGTCTG
TCCCTATCACACCTGGACCTATGAGCTGACGGGCGAGCTCAGCTATGCGCCGCACATGGGCAAGGATTTCGACAAGGACT
GTCACGGCCTGAAGCCCGTTACTTTCAAATCGATCGGCGGCCTGATCTATGTCTGCCTGTCCGACAATCCGCCCGAGGAC
ATTGCCGGCCTCGAACAGGCTATGGTCGAGCGCCTCGCGCCCTACGACATTCGTAACGCCAAGATCGCCCACCAGACCGA
CGTCATCGAAGACGGCAACTGGAAGCTGACGATGGAGAACAATCGCGAGTGCTATCACTGCTCCGCCAACCATCCCGAGC
TCTGCGTCTCCTTCGTCGACCTTGACTTCGGCTTCGACCCGGAGACGCTGAGCCCTGATGATCGCGAACAGGCGGAGGAG
CATTTCCGGCTGTACGAGGCGCGCACCCAGGCATGGGAATCCGACGGTTTCCCATCCGCCGCGATCGAACAGCTCACCGA
CTGCGCCACGAACTTCCGCACGCAACGGCTGATCATCGCAGGCGCCGGCGAATCCCAGACCCACGACGCCACTGCAGCAT
CCTCCAAGCTCCTCGGGGAAATGACCCGCAAAGATCTCGGCGACACGCATCTCTGGGGTCACAACAGCTGGAACCATTTC
ATGGGCGACCACGCGGTCGTCGCGATTGTTATCCCGCTCTCGGCCGGCAAGACGCTGGTCCGCACCAAGTGGCTGGTCCA
CAAGGACGCCGTCGAAGGTGTCGATTACGATCTCGACAAGCTAACGGATGTCTGGATCGCGACAACCGACCAGGACGCCG
ACCTCGTCGCCCGTTCTCATGCCGGCGCTCTCGATCCGGCTTATCAGCCAGGCCCCTATTCCCGCTTCTCCGAGACGAAC
CTCGACAAGTTCGCCACCTGGTACATCGACCGGATGCGCGCTCATGGATACTAG

Upstream 100 bases:

>100_bases
TATTCGCATGATAAAAACTTATGCGAGGCTAATTTTTTATGCCGTTGAAAGCCCGGCGCTGCAAGAGCAATCTGGGGAAA
CTCTCACATAAGAGGTTCTC

Downstream 100 bases:

>100_bases
GAACCCGCAAGCGCCGCTCGCAAAGGCAACCCGTCACGACGTCTGGAATCCCGAGGAAGACGATACACTCGTCTGCCTCG
ACGTGCAGCAGGAGACCCAT

Product: putative dyoxygenase (alpha subunit) oxidoreductase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MLDRLPSSISALLDSRAEGHSLPAGLYIREDVFEADIDVFFHKHWICVGLDCDVPEPGDATVVDIGKTSLILLRDDDGEI
RALHNVCRHRGSRLLSPGKTIVSKLVCPYHTWTYELTGELSYAPHMGKDFDKDCHGLKPVTFKSIGGLIYVCLSDNPPED
IAGLEQAMVERLAPYDIRNAKIAHQTDVIEDGNWKLTMENNRECYHCSANHPELCVSFVDLDFGFDPETLSPDDREQAEE
HFRLYEARTQAWESDGFPSAAIEQLTDCATNFRTQRLIIAGAGESQTHDATAASSKLLGEMTRKDLGDTHLWGHNSWNHF
MGDHAVVAIVIPLSAGKTLVRTKWLVHKDAVEGVDYDLDKLTDVWIATTDQDADLVARSHAGALDPAYQPGPYSRFSETN
LDKFATWYIDRMRAHGY

Sequences:

>Translated_417_residues
MLDRLPSSISALLDSRAEGHSLPAGLYIREDVFEADIDVFFHKHWICVGLDCDVPEPGDATVVDIGKTSLILLRDDDGEI
RALHNVCRHRGSRLLSPGKTIVSKLVCPYHTWTYELTGELSYAPHMGKDFDKDCHGLKPVTFKSIGGLIYVCLSDNPPED
IAGLEQAMVERLAPYDIRNAKIAHQTDVIEDGNWKLTMENNRECYHCSANHPELCVSFVDLDFGFDPETLSPDDREQAEE
HFRLYEARTQAWESDGFPSAAIEQLTDCATNFRTQRLIIAGAGESQTHDATAASSKLLGEMTRKDLGDTHLWGHNSWNHF
MGDHAVVAIVIPLSAGKTLVRTKWLVHKDAVEGVDYDLDKLTDVWIATTDQDADLVARSHAGALDPAYQPGPYSRFSETN
LDKFATWYIDRMRAHGY
>Mature_417_residues
MLDRLPSSISALLDSRAEGHSLPAGLYIREDVFEADIDVFFHKHWICVGLDCDVPEPGDATVVDIGKTSLILLRDDDGEI
RALHNVCRHRGSRLLSPGKTIVSKLVCPYHTWTYELTGELSYAPHMGKDFDKDCHGLKPVTFKSIGGLIYVCLSDNPPED
IAGLEQAMVERLAPYDIRNAKIAHQTDVIEDGNWKLTMENNRECYHCSANHPELCVSFVDLDFGFDPETLSPDDREQAEE
HFRLYEARTQAWESDGFPSAAIEQLTDCATNFRTQRLIIAGAGESQTHDATAASSKLLGEMTRKDLGDTHLWGHNSWNHF
MGDHAVVAIVIPLSAGKTLVRTKWLVHKDAVEGVDYDLDKLTDVWIATTDQDADLVARSHAGALDPAYQPGPYSRFSETN
LDKFATWYIDRMRAHGY

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=213, Percent_Identity=30.9859154929577, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788888, Length=175, Percent_Identity=28, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 46642; Mature: 46642

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRLPSSISALLDSRAEGHSLPAGLYIREDVFEADIDVFFHKHWICVGLDCDVPEPGDA
CCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHEEEEEEEEEEEEECCCCCCCCE
TVVDIGKTSLILLRDDDGEIRALHNVCRHRGSRLLSPGKTIVSKLVCPYHTWTYELTGEL
EEEEECCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCE
SYAPHMGKDFDKDCHGLKPVTFKSIGGLIYVCLSDNPPEDIAGLEQAMVERLAPYDIRNA
EECCCCCCCCCCHHCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
KIAHQTDVIEDGNWKLTMENNRECYHCSANHPELCVSFVDLDFGFDPETLSPDDREQAEE
EEEHHCCCEECCCEEEEEECCCCEEEECCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHH
HFRLYEARTQAWESDGFPSAAIEQLTDCATNFRTQRLIIAGAGESQTHDATAASSKLLGE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHH
MTRKDLGDTHLWGHNSWNHFMGDHAVVAIVIPLSAGKTLVRTKWLVHKDAVEGVDYDLDK
HHHHHCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHH
LTDVWIATTDQDADLVARSHAGALDPAYQPGPYSRFSETNLDKFATWYIDRMRAHGY
HCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDRLPSSISALLDSRAEGHSLPAGLYIREDVFEADIDVFFHKHWICVGLDCDVPEPGDA
CCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHEEEEEEEEEEEEECCCCCCCCE
TVVDIGKTSLILLRDDDGEIRALHNVCRHRGSRLLSPGKTIVSKLVCPYHTWTYELTGEL
EEEEECCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCE
SYAPHMGKDFDKDCHGLKPVTFKSIGGLIYVCLSDNPPEDIAGLEQAMVERLAPYDIRNA
EECCCCCCCCCCHHCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
KIAHQTDVIEDGNWKLTMENNRECYHCSANHPELCVSFVDLDFGFDPETLSPDDREQAEE
EEEHHCCCEECCCEEEEEECCCCEEEECCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHH
HFRLYEARTQAWESDGFPSAAIEQLTDCATNFRTQRLIIAGAGESQTHDATAASSKLLGE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHH
MTRKDLGDTHLWGHNSWNHFMGDHAVVAIVIPLSAGKTLVRTKWLVHKDAVEGVDYDLDK
HHHHHCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHH
LTDVWIATTDQDADLVARSHAGALDPAYQPGPYSRFSETNLDKFATWYIDRMRAHGY
HCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]