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The map label for this gene is ygbL [C]

Identifier: 86361073

GI number: 86361073

Start: 384956

End: 385624

Strand: Reverse

Name: ygbL [C]

Synonym: RHE_PF00343

Alternate gene names: 86361073

Gene position: 385624-384956 (Counterclockwise)

Preceding gene: 86361074

Following gene: 86361072

Centisome position: 60.02

GC content: 64.28

Gene sequence:

>669_bases
ATGTCCGACGCGCGCCTGCGTGAGGAAATCTGCCGGTACGGCCGCTCGCTGTTCGAGCGCGGGCTGACGCCCGGTTCGTC
CGGCAACATATCGTTGCGGCTGGAGGACGGTGGCTGGTTGGTGACACCGACCAACGCGTCGCTCGGCTTCCTCGACCCGG
CCCGCATATCGAGGCTCGACGCGGATCGCCGGTTATTGTCGGGCGACAAGCCGACCAAGGAAATCCCGCTACATACTGCC
CTCTACGATACACGCGGCAGCGCCCGCGCCATCGTTCATCTTCACTCCACCCATGCGGTGGCGCTGACCATGCTGCCGGA
GATCGATCCCCGCGCCGCCCTGCCGCCGATGACGCCATATTATCTCATGCGCGCCGGCGAGACGGCGCTGGTGCCCTATT
ATCGTCCCGGCGATCCCGCGGTGGCCGATGCAATCCGCGGGTTGGCAGGCAGATATTCATCGGTGCTTCTGGCCAATCAT
GGACCCGTCGTCGCCGGCGACAGCCTGGAGGCGGCGGTCTTCGCAACCGAGGAACTGGAGGAGACGGCGAAGCTCTATCT
GCTGCTGCGCAATCTCAATCCGCGGTTCCTCAGTCCGGCTCAGGTGGCTGATCTCGTCAACACCTTCGGCCTCGATCTTC
CCTCGCATCATGACCACGATCACGATTGA

Upstream 100 bases:

>100_bases
ATGGCCGCCGAGCTGGTTGTCGCCAACGCGCCGCCGCAGGCTATCGACCTCGGTTTTGAACTGATCGAAGGGGCGACTGC
GTAACTTTGGAGGAACTGTC

Downstream 100 bases:

>100_bases
ACTCGTCACCGGCCTCGGGGGGCGTCTGGGAGCCCACGCAACCTTCTGCCAAACGCCGCTTTTGATACGATAGATTCTGC
TTCGGATGCCGCCAATTCAG

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSDARLREEICRYGRSLFERGLTPGSSGNISLRLEDGGWLVTPTNASLGFLDPARISRLDADRRLLSGDKPTKEIPLHTA
LYDTRGSARAIVHLHSTHAVALTMLPEIDPRAALPPMTPYYLMRAGETALVPYYRPGDPAVADAIRGLAGRYSSVLLANH
GPVVAGDSLEAAVFATEELEETAKLYLLLRNLNPRFLSPAQVADLVNTFGLDLPSHHDHDHD

Sequences:

>Translated_222_residues
MSDARLREEICRYGRSLFERGLTPGSSGNISLRLEDGGWLVTPTNASLGFLDPARISRLDADRRLLSGDKPTKEIPLHTA
LYDTRGSARAIVHLHSTHAVALTMLPEIDPRAALPPMTPYYLMRAGETALVPYYRPGDPAVADAIRGLAGRYSSVLLANH
GPVVAGDSLEAAVFATEELEETAKLYLLLRNLNPRFLSPAQVADLVNTFGLDLPSHHDHDHD
>Mature_221_residues
SDARLREEICRYGRSLFERGLTPGSSGNISLRLEDGGWLVTPTNASLGFLDPARISRLDADRRLLSGDKPTKEIPLHTAL
YDTRGSARAIVHLHSTHAVALTMLPEIDPRAALPPMTPYYLMRAGETALVPYYRPGDPAVADAIRGLAGRYSSVLLANHG
PVVAGDSLEAAVFATEELEETAKLYLLLRNLNPRFLSPAQVADLVNTFGLDLPSHHDHDHD

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=203, Percent_Identity=49.2610837438424, Blast_Score=195, Evalue=2e-51,
Organism=Escherichia coli, GI1789164, Length=189, Percent_Identity=29.1005291005291, Blast_Score=77, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 24242; Mature: 24111

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDARLREEICRYGRSLFERGLTPGSSGNISLRLEDGGWLVTPTNASLGFLDPARISRLD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHC
ADRRLLSGDKPTKEIPLHTALYDTRGSARAIVHLHSTHAVALTMLPEIDPRAALPPMTPY
HHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCHH
YLMRAGETALVPYYRPGDPAVADAIRGLAGRYSSVLLANHGPVVAGDSLEAAVFATEELE
HHEECCCEEEECEECCCCHHHHHHHHHHHHHHHEEEEECCCCEEECCCCCEEEEEHHHHH
ETAKLYLLLRNLNPRFLSPAQVADLVNTFGLDLPSHHDHDHD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SDARLREEICRYGRSLFERGLTPGSSGNISLRLEDGGWLVTPTNASLGFLDPARISRLD
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHC
ADRRLLSGDKPTKEIPLHTALYDTRGSARAIVHLHSTHAVALTMLPEIDPRAALPPMTPY
HHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCHH
YLMRAGETALVPYYRPGDPAVADAIRGLAGRYSSVLLANHGPVVAGDSLEAAVFATEELE
HHEECCCEEEECEECCCCHHHHHHHHHHHHHHHEEEEECCCCEEECCCCCEEEEEHHHHH
ETAKLYLLLRNLNPRFLSPAQVADLVNTFGLDLPSHHDHDHD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]