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The map label for this gene is ugpB [C]

Identifier: 86361033

GI number: 86361033

Start: 340481

End: 341704

Strand: Reverse

Name: ugpB [C]

Synonym: RHE_PF00303

Alternate gene names: 86361033

Gene position: 341704-340481 (Counterclockwise)

Preceding gene: 86361034

Following gene: 86361032

Centisome position: 53.18

GC content: 60.46

Gene sequence:

>1224_bases
ATGAAGGTTCTGAAGAAAACGCTTTTGCTTGCCGCAGTCGGCGGCAGCCTCTTTGCCACAACAGCATCGGCCGAGCAGAT
CAACCTGACCTGGCAGATGTGGACCGGTTCCGAGGCCGATACCAAGGGCTGGCAGCACCTGGCCGACATGGTGAATGCCA
AATACCCCGATATCAAAGTGACGCTGACGACGACGGGCTGGGTCGATTACTGGACCCGTCTGCCCGTGCTGGCGGCGTCG
GGCCAGCTCGCCGACATTGTTTCCATGCAGTCGCTGCGCATGCCGAATTTCTATTCGCTGCTCGAGCCGCTGAATGACCG
GATCGCGGCCGATAAGTTCGACGTCGGCGCTTTTACGCCATCGATCATCGGCGGCATGTCGGTCGATAAGCAGCTTTATG
GTCTACCCTATGACGTTGGTCCTTGGGTCGTCTATTATAACCGCGATGCGCTTGAAGCTGCGGGCATTCCGCTGCCGAAG
CCGGGCTGGACGCTCGCGGAATTTTCCGACGTCGCCAAGAAGCTGACGAAAGACGGCAAGTACGGCTTCGGCATCACTCC
GCAGAACTATTCCGTCCTGGCGGCGGCTTGGGGTGATAAATATGTCAACGATGCCGGCGAGCTCGACCTTACCAATCCCA
GCGCCATTGCCGCCGCCGACAGGGTGATCGGCTTTGCCGCCAAGGATAAGATCGCGCCGCTGGTGCCGTCGAGCGCCGAT
GTCGGCACATTCATCCAGGGCCGGTTCAATTCGGGCAATGTCGCTATGTATGTCGATGGTCCCTGGTCGATCATCGGCAT
GAAGGACAAGGCGAAGTTCAAGATCGGCCTCACCACCCTGCCGCGCGAAGACGACAAGGACCTTGCCGCGGTTACGGCGG
GCTCCGGCTTCGGCATTGCCACGACGAGCAAGAACAAGGATGCCGCCTGGAAAGCGATCCAGGTGCTGACCAGTCCGGAG
GCACTGCAATACCTCGCCGAGCAAGGGCGCGCGCTGCCGGCCCGCTCGGCCTCGCAATCCTCCTGGTACAAGGTGGCGGC
CAAGGACATCACCAATGGCGGCGAGGCGCTCGATTATTCTTTGGCGCATTCGGTGCCCTATGTGATCACCAACAATTGGG
CGGCGGTGGAAAACCTTTTCAACCAGTATTTCCCGCCGGCCTTCGGCGGCAGCGCCGACGCCAAGCAGACGATGGAGTCG
ATCCAGAGCCTCGCGCAGCAATAG

Upstream 100 bases:

>100_bases
CGGCGACCTGATGTCACTGTCCCGGTGATCGAGATCGTCCTCAAGGCGTGAACTCGGTCGCATTCGCGTGTTCATTGCGT
CATGGAGGGAGGAGAAACCC

Downstream 100 bases:

>100_bases
AGCGCGGCGGCACAAGTTGCCGCCTATGGAGGAAAACATGTCGGAAAGCGCCGTTGCCGAAATTACCCTGCAGACCGGTC
AGCCACGGCGCCTCCTGAAG

Product: putative sugar ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKVLKKTLLLAAVGGSLFATTASAEQINLTWQMWTGSEADTKGWQHLADMVNAKYPDIKVTLTTTGWVDYWTRLPVLAAS
GQLADIVSMQSLRMPNFYSLLEPLNDRIAADKFDVGAFTPSIIGGMSVDKQLYGLPYDVGPWVVYYNRDALEAAGIPLPK
PGWTLAEFSDVAKKLTKDGKYGFGITPQNYSVLAAAWGDKYVNDAGELDLTNPSAIAAADRVIGFAAKDKIAPLVPSSAD
VGTFIQGRFNSGNVAMYVDGPWSIIGMKDKAKFKIGLTTLPREDDKDLAAVTAGSGFGIATTSKNKDAAWKAIQVLTSPE
ALQYLAEQGRALPARSASQSSWYKVAAKDITNGGEALDYSLAHSVPYVITNNWAAVENLFNQYFPPAFGGSADAKQTMES
IQSLAQQ

Sequences:

>Translated_407_residues
MKVLKKTLLLAAVGGSLFATTASAEQINLTWQMWTGSEADTKGWQHLADMVNAKYPDIKVTLTTTGWVDYWTRLPVLAAS
GQLADIVSMQSLRMPNFYSLLEPLNDRIAADKFDVGAFTPSIIGGMSVDKQLYGLPYDVGPWVVYYNRDALEAAGIPLPK
PGWTLAEFSDVAKKLTKDGKYGFGITPQNYSVLAAAWGDKYVNDAGELDLTNPSAIAAADRVIGFAAKDKIAPLVPSSAD
VGTFIQGRFNSGNVAMYVDGPWSIIGMKDKAKFKIGLTTLPREDDKDLAAVTAGSGFGIATTSKNKDAAWKAIQVLTSPE
ALQYLAEQGRALPARSASQSSWYKVAAKDITNGGEALDYSLAHSVPYVITNNWAAVENLFNQYFPPAFGGSADAKQTMES
IQSLAQQ
>Mature_407_residues
MKVLKKTLLLAAVGGSLFATTASAEQINLTWQMWTGSEADTKGWQHLADMVNAKYPDIKVTLTTTGWVDYWTRLPVLAAS
GQLADIVSMQSLRMPNFYSLLEPLNDRIAADKFDVGAFTPSIIGGMSVDKQLYGLPYDVGPWVVYYNRDALEAAGIPLPK
PGWTLAEFSDVAKKLTKDGKYGFGITPQNYSVLAAAWGDKYVNDAGELDLTNPSAIAAADRVIGFAAKDKIAPLVPSSAD
VGTFIQGRFNSGNVAMYVDGPWSIIGMKDKAKFKIGLTTLPREDDKDLAAVTAGSGFGIATTSKNKDAAWKAIQVLTSPE
ALQYLAEQGRALPARSASQSSWYKVAAKDITNGGEALDYSLAHSVPYVITNNWAAVENLFNQYFPPAFGGSADAKQTMES
IQSLAQQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 43834; Mature: 43834

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLKKTLLLAAVGGSLFATTASAEQINLTWQMWTGSEADTKGWQHLADMVNAKYPDIKV
CHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEE
TLTTTGWVDYWTRLPVLAASGQLADIVSMQSLRMPNFYSLLEPLNDRIAADKFDVGAFTP
EEEECCHHHHHHHCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCH
SIIGGMSVDKQLYGLPYDVGPWVVYYNRDALEAAGIPLPKPGWTLAEFSDVAKKLTKDGK
HHHCCCCCCHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
YGFGITPQNYSVLAAAWGDKYVNDAGELDLTNPSAIAAADRVIGFAAKDKIAPLVPSSAD
CCCCCCCCCCEEEEEECCCHHCCCCCCEECCCCHHHHHHHHHHEECCCCCCCCCCCCCCC
VGTFIQGRFNSGNVAMYVDGPWSIIGMKDKAKFKIGLTTLPREDDKDLAAVTAGSGFGIA
CCCEEEEEECCCCEEEEECCCEEEEECCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEE
TTSKNKDAAWKAIQVLTSPEALQYLAEQGRALPARSASQSSWYKVAAKDITNGGEALDYS
ECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHCCCCCCCEEHH
LAHSVPYVITNNWAAVENLFNQYFPPAFGGSADAKQTMESIQSLAQQ
HHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLKKTLLLAAVGGSLFATTASAEQINLTWQMWTGSEADTKGWQHLADMVNAKYPDIKV
CHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEE
TLTTTGWVDYWTRLPVLAASGQLADIVSMQSLRMPNFYSLLEPLNDRIAADKFDVGAFTP
EEEECCHHHHHHHCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCH
SIIGGMSVDKQLYGLPYDVGPWVVYYNRDALEAAGIPLPKPGWTLAEFSDVAKKLTKDGK
HHHCCCCCCHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
YGFGITPQNYSVLAAAWGDKYVNDAGELDLTNPSAIAAADRVIGFAAKDKIAPLVPSSAD
CCCCCCCCCCEEEEEECCCHHCCCCCCEECCCCHHHHHHHHHHEECCCCCCCCCCCCCCC
VGTFIQGRFNSGNVAMYVDGPWSIIGMKDKAKFKIGLTTLPREDDKDLAAVTAGSGFGIA
CCCEEEEEECCCCEEEEECCCEEEEECCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEE
TTSKNKDAAWKAIQVLTSPEALQYLAEQGRALPARSASQSSWYKVAAKDITNGGEALDYS
ECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHCCCCCCCEEHH
LAHSVPYVITNNWAAVENLFNQYFPPAFGGSADAKQTMESIQSLAQQ
HHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA