Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is yesP [H]
Identifier: 86361032
GI number: 86361032
Start: 339517
End: 340443
Strand: Reverse
Name: yesP [H]
Synonym: RHE_PF00302
Alternate gene names: 86361032
Gene position: 340443-339517 (Counterclockwise)
Preceding gene: 86361033
Following gene: 86361031
Centisome position: 52.99
GC content: 60.09
Gene sequence:
>927_bases ATGTCGGAAAGCGCCGTTGCCGAAATTACCCTGCAGACCGGTCAGCCACGGCGCCTCCTGAAGCCGGAAACGCAGACGGC CATGCTGTTCCTGCTGCCGAGTTTCCTCGGCTTCATGATCTTCATGGCGCTGCCGATCCTGGCGTCGCTGGCACTGTCCT TCACCAACTGGCAGCTGCTGAAGACGCCGTCCTTCGTCGGCTTTCAAAATTATATCAAGCTCTTCGCCGTTGATCCCGCT TTCTACACCGTCCTCGGAAATACGCTGTTTTTCGCCGTGGAATATTTGGCACTGAACATCATTGTCTCGCTGACGCTGGC GGTATGGATATCGAGTCTCAAGCGCTGCAAGGCGATCTTCCGGGTGATCTTCTTTCTGCCGACCTTTACCCCGACGATCG CAGCCTCCGTGGTGTGGCTGCTGATCTTCACGCCGGGCGGGCTCGCCGACAACGTCATCCGCTGGCTCGGCCTCGGCCTG CCGAATTTCCTGCTGAGTTCGAGCTGGGCCATGCAGGCGGTCGTGCTCGTCACGCTCTGGGCCAATGTCGGCTACAACGT CGTGATGTTCAACGCCGCGCTCGACCTGGTACCGAAGCACTATCTCGAGGCGGCGATGATCGATGGGGCAGGGCCCTGGC GGCGCTTCTGGCGCATCCGGCTGCCGCTCATCTCGCCGACGGTCTTCTTCGCCACCGTCATGACGGCCATCACGTCGCTG CAGGTTTTCGACGAGATTTTCGCCATGACCCGCGGCGGCCCAGGCTCGGCGACCGCGACACTCGGCTTTGCCATCTATCA GAAGGGCTTCACCAATTTCCAGATGGGCTATGCCTCGGCGCTCGCCTGGGTGATGTTCGTCATGATCATGGGCCTCACCA TCCTGCAGTTCCACATGCAGCGCAAATGGGTGCATTATGACGACTGA
Upstream 100 bases:
>100_bases TTCGGCGGCAGCGCCGACGCCAAGCAGACGATGGAGTCGATCCAGAGCCTCGCGCAGCAATAGAGCGCGGCGGCACAAGT TGCCGCCTATGGAGGAAAAC
Downstream 100 bases:
>100_bases CCCGACCTTGCGGCATTCGCATTCCGTCTCTGCAGGTCGGCGCCGCATCCTGCGGCGCATCGGCACCTTCTTCAGCTATG CCGGCCTTTCGCTGGTCGCG
Product: sugar ABC transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSESAVAEITLQTGQPRRLLKPETQTAMLFLLPSFLGFMIFMALPILASLALSFTNWQLLKTPSFVGFQNYIKLFAVDPA FYTVLGNTLFFAVEYLALNIIVSLTLAVWISSLKRCKAIFRVIFFLPTFTPTIAASVVWLLIFTPGGLADNVIRWLGLGL PNFLLSSSWAMQAVVLVTLWANVGYNVVMFNAALDLVPKHYLEAAMIDGAGPWRRFWRIRLPLISPTVFFATVMTAITSL QVFDEIFAMTRGGPGSATATLGFAIYQKGFTNFQMGYASALAWVMFVMIMGLTILQFHMQRKWVHYDD
Sequences:
>Translated_308_residues MSESAVAEITLQTGQPRRLLKPETQTAMLFLLPSFLGFMIFMALPILASLALSFTNWQLLKTPSFVGFQNYIKLFAVDPA FYTVLGNTLFFAVEYLALNIIVSLTLAVWISSLKRCKAIFRVIFFLPTFTPTIAASVVWLLIFTPGGLADNVIRWLGLGL PNFLLSSSWAMQAVVLVTLWANVGYNVVMFNAALDLVPKHYLEAAMIDGAGPWRRFWRIRLPLISPTVFFATVMTAITSL QVFDEIFAMTRGGPGSATATLGFAIYQKGFTNFQMGYASALAWVMFVMIMGLTILQFHMQRKWVHYDD >Mature_307_residues SESAVAEITLQTGQPRRLLKPETQTAMLFLLPSFLGFMIFMALPILASLALSFTNWQLLKTPSFVGFQNYIKLFAVDPAF YTVLGNTLFFAVEYLALNIIVSLTLAVWISSLKRCKAIFRVIFFLPTFTPTIAASVVWLLIFTPGGLADNVIRWLGLGLP NFLLSSSWAMQAVVLVTLWANVGYNVVMFNAALDLVPKHYLEAAMIDGAGPWRRFWRIRLPLISPTVFFATVMTAITSLQ VFDEIFAMTRGGPGSATATLGFAIYQKGFTNFQMGYASALAWVMFVMIMGLTILQFHMQRKWVHYDD
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789861, Length=248, Percent_Identity=33.8709677419355, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1787570, Length=263, Percent_Identity=25.4752851711027, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34491; Mature: 34360
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESAVAEITLQTGQPRRLLKPETQTAMLFLLPSFLGFMIFMALPILASLALSFTNWQLL CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE KTPSFVGFQNYIKLFAVDPAFYTVLGNTLFFAVEYLALNIIVSLTLAVWISSLKRCKAIF ECCCCCCHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVIFFLPTFTPTIAASVVWLLIFTPGGLADNVIRWLGLGLPNFLLSSSWAMQAVVLVTLW HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHH ANVGYNVVMFNAALDLVPKHYLEAAMIDGAGPWRRFWRIRLPLISPTVFFATVMTAITSL HHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCHHHHHHHHHHHHHHHHHH QVFDEIFAMTRGGPGSATATLGFAIYQKGFTNFQMGYASALAWVMFVMIMGLTILQFHMQ HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKWVHYDD HCCCCCCC >Mature Secondary Structure SESAVAEITLQTGQPRRLLKPETQTAMLFLLPSFLGFMIFMALPILASLALSFTNWQLL CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE KTPSFVGFQNYIKLFAVDPAFYTVLGNTLFFAVEYLALNIIVSLTLAVWISSLKRCKAIF ECCCCCCHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVIFFLPTFTPTIAASVVWLLIFTPGGLADNVIRWLGLGLPNFLLSSSWAMQAVVLVTLW HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHH ANVGYNVVMFNAALDLVPKHYLEAAMIDGAGPWRRFWRIRLPLISPTVFFATVMTAITSL HHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCHHHHHHHHHHHHHHHHHH QVFDEIFAMTRGGPGSATATLGFAIYQKGFTNFQMGYASALAWVMFVMIMGLTILQFHMQ HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKWVHYDD HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]