Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is yesP [H]

Identifier: 86361032

GI number: 86361032

Start: 339517

End: 340443

Strand: Reverse

Name: yesP [H]

Synonym: RHE_PF00302

Alternate gene names: 86361032

Gene position: 340443-339517 (Counterclockwise)

Preceding gene: 86361033

Following gene: 86361031

Centisome position: 52.99

GC content: 60.09

Gene sequence:

>927_bases
ATGTCGGAAAGCGCCGTTGCCGAAATTACCCTGCAGACCGGTCAGCCACGGCGCCTCCTGAAGCCGGAAACGCAGACGGC
CATGCTGTTCCTGCTGCCGAGTTTCCTCGGCTTCATGATCTTCATGGCGCTGCCGATCCTGGCGTCGCTGGCACTGTCCT
TCACCAACTGGCAGCTGCTGAAGACGCCGTCCTTCGTCGGCTTTCAAAATTATATCAAGCTCTTCGCCGTTGATCCCGCT
TTCTACACCGTCCTCGGAAATACGCTGTTTTTCGCCGTGGAATATTTGGCACTGAACATCATTGTCTCGCTGACGCTGGC
GGTATGGATATCGAGTCTCAAGCGCTGCAAGGCGATCTTCCGGGTGATCTTCTTTCTGCCGACCTTTACCCCGACGATCG
CAGCCTCCGTGGTGTGGCTGCTGATCTTCACGCCGGGCGGGCTCGCCGACAACGTCATCCGCTGGCTCGGCCTCGGCCTG
CCGAATTTCCTGCTGAGTTCGAGCTGGGCCATGCAGGCGGTCGTGCTCGTCACGCTCTGGGCCAATGTCGGCTACAACGT
CGTGATGTTCAACGCCGCGCTCGACCTGGTACCGAAGCACTATCTCGAGGCGGCGATGATCGATGGGGCAGGGCCCTGGC
GGCGCTTCTGGCGCATCCGGCTGCCGCTCATCTCGCCGACGGTCTTCTTCGCCACCGTCATGACGGCCATCACGTCGCTG
CAGGTTTTCGACGAGATTTTCGCCATGACCCGCGGCGGCCCAGGCTCGGCGACCGCGACACTCGGCTTTGCCATCTATCA
GAAGGGCTTCACCAATTTCCAGATGGGCTATGCCTCGGCGCTCGCCTGGGTGATGTTCGTCATGATCATGGGCCTCACCA
TCCTGCAGTTCCACATGCAGCGCAAATGGGTGCATTATGACGACTGA

Upstream 100 bases:

>100_bases
TTCGGCGGCAGCGCCGACGCCAAGCAGACGATGGAGTCGATCCAGAGCCTCGCGCAGCAATAGAGCGCGGCGGCACAAGT
TGCCGCCTATGGAGGAAAAC

Downstream 100 bases:

>100_bases
CCCGACCTTGCGGCATTCGCATTCCGTCTCTGCAGGTCGGCGCCGCATCCTGCGGCGCATCGGCACCTTCTTCAGCTATG
CCGGCCTTTCGCTGGTCGCG

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSESAVAEITLQTGQPRRLLKPETQTAMLFLLPSFLGFMIFMALPILASLALSFTNWQLLKTPSFVGFQNYIKLFAVDPA
FYTVLGNTLFFAVEYLALNIIVSLTLAVWISSLKRCKAIFRVIFFLPTFTPTIAASVVWLLIFTPGGLADNVIRWLGLGL
PNFLLSSSWAMQAVVLVTLWANVGYNVVMFNAALDLVPKHYLEAAMIDGAGPWRRFWRIRLPLISPTVFFATVMTAITSL
QVFDEIFAMTRGGPGSATATLGFAIYQKGFTNFQMGYASALAWVMFVMIMGLTILQFHMQRKWVHYDD

Sequences:

>Translated_308_residues
MSESAVAEITLQTGQPRRLLKPETQTAMLFLLPSFLGFMIFMALPILASLALSFTNWQLLKTPSFVGFQNYIKLFAVDPA
FYTVLGNTLFFAVEYLALNIIVSLTLAVWISSLKRCKAIFRVIFFLPTFTPTIAASVVWLLIFTPGGLADNVIRWLGLGL
PNFLLSSSWAMQAVVLVTLWANVGYNVVMFNAALDLVPKHYLEAAMIDGAGPWRRFWRIRLPLISPTVFFATVMTAITSL
QVFDEIFAMTRGGPGSATATLGFAIYQKGFTNFQMGYASALAWVMFVMIMGLTILQFHMQRKWVHYDD
>Mature_307_residues
SESAVAEITLQTGQPRRLLKPETQTAMLFLLPSFLGFMIFMALPILASLALSFTNWQLLKTPSFVGFQNYIKLFAVDPAF
YTVLGNTLFFAVEYLALNIIVSLTLAVWISSLKRCKAIFRVIFFLPTFTPTIAASVVWLLIFTPGGLADNVIRWLGLGLP
NFLLSSSWAMQAVVLVTLWANVGYNVVMFNAALDLVPKHYLEAAMIDGAGPWRRFWRIRLPLISPTVFFATVMTAITSLQ
VFDEIFAMTRGGPGSATATLGFAIYQKGFTNFQMGYASALAWVMFVMIMGLTILQFHMQRKWVHYDD

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=248, Percent_Identity=33.8709677419355, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1787570, Length=263, Percent_Identity=25.4752851711027, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34491; Mature: 34360

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESAVAEITLQTGQPRRLLKPETQTAMLFLLPSFLGFMIFMALPILASLALSFTNWQLL
CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
KTPSFVGFQNYIKLFAVDPAFYTVLGNTLFFAVEYLALNIIVSLTLAVWISSLKRCKAIF
ECCCCCCHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVIFFLPTFTPTIAASVVWLLIFTPGGLADNVIRWLGLGLPNFLLSSSWAMQAVVLVTLW
HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHH
ANVGYNVVMFNAALDLVPKHYLEAAMIDGAGPWRRFWRIRLPLISPTVFFATVMTAITSL
HHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCHHHHHHHHHHHHHHHHHH
QVFDEIFAMTRGGPGSATATLGFAIYQKGFTNFQMGYASALAWVMFVMIMGLTILQFHMQ
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKWVHYDD
HCCCCCCC
>Mature Secondary Structure 
SESAVAEITLQTGQPRRLLKPETQTAMLFLLPSFLGFMIFMALPILASLALSFTNWQLL
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE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HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]