Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is glnP [H]
Identifier: 86360897
GI number: 86360897
Start: 174210
End: 174872
Strand: Reverse
Name: glnP [H]
Synonym: RHE_PF00166
Alternate gene names: 86360897
Gene position: 174872-174210 (Counterclockwise)
Preceding gene: 86360898
Following gene: 86360896
Centisome position: 27.22
GC content: 60.33
Gene sequence:
>663_bases ATGGGTTACACACTGAATTTCGCAGCCGTCTGGCGCAATTTCGACTTTCTCTTAAGCGGACTTGCCCTCAGCCTCGGTCT TGCCGTGATCTCGATCCTGATCGGGGCCGCGATCGGTCTTGTCGTGGCTTTCGCGCTGACGTCGACGAGCCGCTTCGCGC TCGTGCCGGCGCGCGTCTATGTCACTGTCATTCGCAACCTGCCGATTCTCGTCCTGGTGCTTTTCGCCTTTTTCGCGCTG CCGCAGATGGGCTTGCGCCTCGACAAAATGAAAAGCTTCGTGCTGGTTCTTTCGCTCTATTCCGGCGCCTATCTCGCCGA GGTGTTCCGCGCCGGACTGCTGTCGATTCCGAGAGGATTGACGGAAGCCGGCCTCGCCATCGGCCTGACGGCAATGCAGA TCCGCAGCTCGATCATCGCACCGCTGATGCTGCGCAACGTGCTGCCATCACTCTCCTCGACGATCATCTCGCTCTTCAAG GACACCTCGCTCGCCGCCGCCATCGCCGTGCCCGAGCTGACCTTTGCCGCCCGCAAGATCAATGTCGAGAGCTTCCGCGT CATCGAAACATGGATGGTTACATCAGCCCTCTATGTCGCGACCTGTTTCCTCATCGCCGCTTTGATGCGCCTCGTCGAGC GCCGTCTGGCCCTGCCGAGATAG
Upstream 100 bases:
>100_bases GGCTAAGATCTAAGTCCACTTCTGACTCGAATGGTTGGACCATGACGTCTTCCGGGCCGCTCGCAGACTCGGCGACATGC TCCGGTCTGAAAGGACCCGT
Downstream 100 bases:
>100_bases ACCCGATGTCTCACACTTTTCTGGAACAGCTCTGGATCGCCCGCTACGTCATCATGAACGGCATTGCGATGACGGTGTCG ATCTCCCTGCTGGCCATTCT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MGYTLNFAAVWRNFDFLLSGLALSLGLAVISILIGAAIGLVVAFALTSTSRFALVPARVYVTVIRNLPILVLVLFAFFAL PQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTAMQIRSSIIAPLMLRNVLPSLSSTIISLFK DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR
Sequences:
>Translated_220_residues MGYTLNFAAVWRNFDFLLSGLALSLGLAVISILIGAAIGLVVAFALTSTSRFALVPARVYVTVIRNLPILVLVLFAFFAL PQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTAMQIRSSIIAPLMLRNVLPSLSSTIISLFK DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR >Mature_219_residues GYTLNFAAVWRNFDFLLSGLALSLGLAVISILIGAAIGLVVAFALTSTSRFALVPARVYVTVIRNLPILVLVLFAFFALP QMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLTAMQIRSSIIAPLMLRNVLPSLSSTIISLFKD TSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=36.7441860465116, Blast_Score=134, Evalue=7e-33, Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=34.8258706467662, Blast_Score=110, Evalue=6e-26, Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=27.0642201834862, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786873, Length=225, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1786874, Length=231, Percent_Identity=28.1385281385281, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=26.7605633802817, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI48994930, Length=134, Percent_Identity=33.5820895522388, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=26.457399103139, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=26.9230769230769, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23841; Mature: 23710
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYTLNFAAVWRNFDFLLSGLALSLGLAVISILIGAAIGLVVAFALTSTSRFALVPARVY CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VTVIRNLPILVLVLFAFFALPQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGL HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCH TEAGLAIGLTAMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFAARKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GYTLNFAAVWRNFDFLLSGLALSLGLAVISILIGAAIGLVVAFALTSTSRFALVPARVY CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VTVIRNLPILVLVLFAFFALPQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGL HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCH TEAGLAIGLTAMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFAARKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]