Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is glnP [H]
Identifier: 86360896
GI number: 86360896
Start: 173545
End: 174204
Strand: Reverse
Name: glnP [H]
Synonym: RHE_PF00165
Alternate gene names: 86360896
Gene position: 174204-173545 (Counterclockwise)
Preceding gene: 86360897
Following gene: 86360895
Centisome position: 27.11
GC content: 61.06
Gene sequence:
>660_bases ATGTCTCACACTTTTCTGGAACAGCTCTGGATCGCCCGCTACGTCATCATGAACGGCATTGCGATGACGGTGTCGATCTC CCTGCTGGCCATTCTCGCTGGCTCCGTCCTCGGCGTTTTCGTCGGTCTGGCGCTCGTCTATGGCGGCATCGTTTTGCGCC TGATCGTGCGGGCCTATACCGATATCATCCGCGGCACGCCGGTGCTCGTGCTGGTGCTGGCAAGCTATTACGTCTCCGCC GCGGTCGGTCTCGATCTCGGACCGTTCTCCGCTGGCGTGCTCGCGCTTGCCGTCTTCTGCTCGTCGCATGTCGGCGAAAT CGTGCGCGGAGCGCTTCAGGCGATCCCGAAGGGCCAGACCGAAGCCGCCAAGGCGATCGGCCTGACCTTTGCCCAGACCT TTACTTCGGTGCTGTGGCCGCAGGCCATGCGCCAATGTCTGCCGGCATGGGTGAATACGGCGGCCGAGATGGTGAAGGCC TCGACGCTGCTCTCCGTCATCGGTGTCGCGGAGCTTCTCCTGCGCACGCAGGAGATCATTTCCCGCAATTTCATGAGCCT CCAGTTCTATTTTCTGGCCGGCGGTCTCTATTTCATCGTCAACTACGGCATCGAGCACTTCGGCAAATATGTCGAGCGCA AGACCGCACTGCCGTCCTGA
Upstream 100 bases:
>100_bases CATGGATGGTTACATCAGCCCTCTATGTCGCGACCTGTTTCCTCATCGCCGCTTTGATGCGCCTCGTCGAGCGCCGTCTG GCCCTGCCGAGATAGACCCG
Downstream 100 bases:
>100_bases GGAGCCTTCCGATGGCCAAGACCATTCTCGACATCAAGGGTCTGCGCAAGACTTACGGTATCCACGAAGTTCTCAAGGGG GTCGATTGCGCCGTTCAGGA
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSHTFLEQLWIARYVIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGIVLRLIVRAYTDIIRGTPVLVLVLASYYVSA AVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFAQTFTSVLWPQAMRQCLPAWVNTAAEMVKA STLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTALPS
Sequences:
>Translated_219_residues MSHTFLEQLWIARYVIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGIVLRLIVRAYTDIIRGTPVLVLVLASYYVSA AVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFAQTFTSVLWPQAMRQCLPAWVNTAAEMVKA STLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTALPS >Mature_218_residues SHTFLEQLWIARYVIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGIVLRLIVRAYTDIIRGTPVLVLVLASYYVSAA VGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFAQTFTSVLWPQAMRQCLPAWVNTAAEMVKAS TLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTALPS
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=33.6538461538462, Blast_Score=114, Evalue=4e-27, Organism=Escherichia coli, GI1788226, Length=208, Percent_Identity=29.8076923076923, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788646, Length=157, Percent_Identity=33.1210191082803, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1787087, Length=220, Percent_Identity=26.3636363636364, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI87082239, Length=202, Percent_Identity=27.7227722772277, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=24.2857142857143, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=27.0642201834862, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=27.3148148148148, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787086, Length=209, Percent_Identity=23.9234449760766, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI48994930, Length=129, Percent_Identity=29.4573643410853, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23592; Mature: 23461
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTFLEQLWIARYVIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGIVLRLIVRAYT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIIRGTPVLVLVLASYYVSAAVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQT HHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EAAKAIGLTFAQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLRTQEII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTALPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SHTFLEQLWIARYVIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGIVLRLIVRAYT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIIRGTPVLVLVLASYYVSAAVGLDLGPFSAGVLALAVFCSSHVGEIVRGALQAIPKGQT HHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EAAKAIGLTFAQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLRTQEII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTALPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]