Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360858
Identifier: 86360858
GI number: 86360858
Start: 133963
End: 134406
Strand: Reverse
Name: 86360858
Synonym: RHE_PF00127
Alternate gene names: NA
Gene position: 134406-133963 (Counterclockwise)
Preceding gene: 86360867
Following gene: 86360857
Centisome position: 20.92
GC content: 55.63
Gene sequence:
>444_bases GTGGCTCCCTTCGCCCCAATCAAAGGAGGACAAGATGTCTTCCACCTTCAAGCACTCTTCCCATATCGCGGCTTATGGCG ACTTCTTATTCAGGGCTTCCATCCTGGCGAGCTTCGCCGTCATCATCAGTTTAATTTTGAGAGGCTGGTTATGGTAGTAA TCATGACAAGCGGAATTTCGACGAAACGCGACCAAAATTGGCGGCTCCGGTCCATCCTCAAGCGCGCGGACTACGCGACG ACAGATCTCGTTGCTTCAGAACATGGCGACCATCACGAAGAGGTGATGGTGATAAGGCGCATCAAGGCGGCGACGATTCC CGCGCCCGCCTACCCCTCTTCGAGACGGCGGAAGCTGCATGCCGATCCTGAGGCTTTGGCATCATGGGAAAACGAAGGAG GCGCCACGCGAGCTGTGGACGCGCCTGCGGACAAGAAAAATTGA
Upstream 100 bases:
>100_bases TGCCTGGCACTGCGTTCGCCGCTTTCGCCTTGGATAAGGCGCAATCAACGCGCATGTTGGCATATCGGCAGCCAATGAAA CGGGCGCTGCCGATCAGGGG
Downstream 100 bases:
>100_bases TGACCCAGCGAGGCAATTGAGCAAGGAATGCCGAATTGGCGATCAGGGCTCGCTGCTCGAAAGCCCATTCCATCTTATTC TTTGGTGATGCTGAGATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAPFAPIKGGQDVFHLQALFPYRGLWRLLIQGFHPGELRRHHQFNFERLVMVVIMTSGISTKRDQNWRLRSILKRADYAT TDLVASEHGDHHEEVMVIRRIKAATIPAPAYPSSRRRKLHADPEALASWENEGGATRAVDAPADKKN
Sequences:
>Translated_147_residues MAPFAPIKGGQDVFHLQALFPYRGLWRLLIQGFHPGELRRHHQFNFERLVMVVIMTSGISTKRDQNWRLRSILKRADYAT TDLVASEHGDHHEEVMVIRRIKAATIPAPAYPSSRRRKLHADPEALASWENEGGATRAVDAPADKKN >Mature_146_residues APFAPIKGGQDVFHLQALFPYRGLWRLLIQGFHPGELRRHHQFNFERLVMVVIMTSGISTKRDQNWRLRSILKRADYATT DLVASEHGDHHEEVMVIRRIKAATIPAPAYPSSRRRKLHADPEALASWENEGGATRAVDAPADKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16730; Mature: 16599
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPFAPIKGGQDVFHLQALFPYRGLWRLLIQGFHPGELRRHHQFNFERLVMVVIMTSGIS CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCC TKRDQNWRLRSILKRADYATTDLVASEHGDHHEEVMVIRRIKAATIPAPAYPSSRRRKLH CCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ADPEALASWENEGGATRAVDAPADKKN CCHHHHHCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure APFAPIKGGQDVFHLQALFPYRGLWRLLIQGFHPGELRRHHQFNFERLVMVVIMTSGIS CCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCC TKRDQNWRLRSILKRADYATTDLVASEHGDHHEEVMVIRRIKAATIPAPAYPSSRRRKLH CCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ADPEALASWENEGGATRAVDAPADKKN CCHHHHHCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA