Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
---|---|
Accession | NC_007766 |
Length | 642,517 |
Click here to switch to the map view.
The map label for this gene is 86360867
Identifier: 86360867
GI number: 86360867
Start: 142957
End: 143379
Strand: Reverse
Name: 86360867
Synonym: RHE_PF00136
Alternate gene names: NA
Gene position: 143379-142957 (Counterclockwise)
Preceding gene: 86360873
Following gene: 86360858
Centisome position: 22.32
GC content: 58.16
Gene sequence:
>423_bases TTGAAAGCACGGTCATGCGAATACCCTCGCGGCGAGCGCCGCCTCCATGAACGCCCTGCGGGCTCTCTCGGCACTTCCAC GACGAGCGATGGCATCGACGCATCTGCGCTTGGCGACGCCGAACTCACGAGAATTGGTCGACGGCCAGCGATGGAGAAGC GCCGCAAGCGCCGCGTCCGGACCCTCAATGCGCTCACGAATGCCGTCGCCGATCCGGACGTATACCGGTGGCTTCCAAAT GACATGGAAGTCGATGTTGATAACCTTTTCCATTGCAGACCTCATTGCCAGGTTTCCCCGACAACCGCCTTCAGCTGTCC GAGTTCCCAAGCCGCAATGGTTGGTCCGTTATCGGACAGCTTGGAAGAGAATATAGGGAGAAGGACGCGATCGTTAATGA TCTTACACGAGCGTCGATACTGA
Upstream 100 bases:
>100_bases CTGATCTCCTCAGCGGTCCCGAGAACGGCCGCCAGGCCGGCAGCAATCCAGCATGTAAGCGTCAACGTCCCCAAAAGTAT CGCCCAGTGCGGTGCGTCGA
Downstream 100 bases:
>100_bases AGGATTCGCTGGAGTGTGCAATCTGAGCATATTTCGACGGCGTCCGCGATGACGCCAAGTTCGTGCGGCGGCGGTGGAGC TGGCTGGCGCCGAATAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKARSCEYPRGERRLHERPAGSLGTSTTSDGIDASALGDAELTRIGRRPAMEKRRKRRVRTLNALTNAVADPDVYRWLPN DMEVDVDNLFHCRPHCQVSPTTAFSCPSSQAAMVGPLSDSLEENIGRRTRSLMILHERRY
Sequences:
>Translated_140_residues MKARSCEYPRGERRLHERPAGSLGTSTTSDGIDASALGDAELTRIGRRPAMEKRRKRRVRTLNALTNAVADPDVYRWLPN DMEVDVDNLFHCRPHCQVSPTTAFSCPSSQAAMVGPLSDSLEENIGRRTRSLMILHERRY >Mature_140_residues MKARSCEYPRGERRLHERPAGSLGTSTTSDGIDASALGDAELTRIGRRPAMEKRRKRRVRTLNALTNAVADPDVYRWLPN DMEVDVDNLFHCRPHCQVSPTTAFSCPSSQAAMVGPLSDSLEENIGRRTRSLMILHERRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15781; Mature: 15781
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARSCEYPRGERRLHERPAGSLGTSTTSDGIDASALGDAELTRIGRRPAMEKRRKRRVR CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHCCCCHHHHHHHHHHH TLNALTNAVADPDVYRWLPNDMEVDVDNLFHCRPHCQVSPTTAFSCPSSQAAMVGPLSDS HHHHHHHHHCCCHHHHCCCCCCEECHHHHEECCCCCCCCCCCCCCCCCCCCEEECCCHHH LEENIGRRTRSLMILHERRY HHHHHHHHHHHHHHEECCCC >Mature Secondary Structure MKARSCEYPRGERRLHERPAGSLGTSTTSDGIDASALGDAELTRIGRRPAMEKRRKRRVR CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHCCCCHHHHHHHHHHH TLNALTNAVADPDVYRWLPNDMEVDVDNLFHCRPHCQVSPTTAFSCPSSQAAMVGPLSDS HHHHHHHHHCCCHHHHCCCCCCEECHHHHEECCCCCCCCCCCCCCCCCCCCEEECCCHHH LEENIGRRTRSLMILHERRY HHHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA