Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360857
Identifier: 86360857
GI number: 86360857
Start: 133104
End: 133412
Strand: Reverse
Name: 86360857
Synonym: RHE_PF00126
Alternate gene names: NA
Gene position: 133412-133104 (Counterclockwise)
Preceding gene: 86360858
Following gene: 86360856
Centisome position: 20.76
GC content: 53.72
Gene sequence:
>309_bases ATGTCTTCCAATCTCAACATGTCTGTGCGGACCTCTGACCTGGCTGTATTGCAGGCTGTCCTTGACGACGCAGGATACGA CTGCACAAGTAGCCTTGCAGACCCGAGATATTACAACGTTGCCGTCAGACTGCTGTTCAAGCTTTATCACGACGGAATGA CCTCGCCCGCCGCCCTCTCTAGCGAACTCAGCCGGCACTTCGGAAAAACACCACTGTCCTCGAAATCATCCGCGGAGTTC GAAAAAAATCGCAAGCGGATTCAGGGTATCCGTTCAGCCGTTAAAGTTAGGTCGCCTACCGGCGCCTGA
Upstream 100 bases:
>100_bases GTATTGATTAGGCGCATGGTAGGTCTTCAGTAGCTGTTTCTCAGGGCGCTACTGCTTGGAGGTCGGTTGTTGCCTTCGCC CCAAATTGAAGGAGGACAGC
Downstream 100 bases:
>100_bases ACAGACCGCGTTGAGTAACTTCTCGCAAAGCTCATTCGACGAAGCCCATACCAACGCGGTGGCGGGTTGCATGCCGACGC CGTTCGAACAGCCAGACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSSNLNMSVRTSDLAVLQAVLDDAGYDCTSSLADPRYYNVAVRLLFKLYHDGMTSPAALSSELSRHFGKTPLSSKSSAEF EKNRKRIQGIRSAVKVRSPTGA
Sequences:
>Translated_102_residues MSSNLNMSVRTSDLAVLQAVLDDAGYDCTSSLADPRYYNVAVRLLFKLYHDGMTSPAALSSELSRHFGKTPLSSKSSAEF EKNRKRIQGIRSAVKVRSPTGA >Mature_101_residues SSNLNMSVRTSDLAVLQAVLDDAGYDCTSSLADPRYYNVAVRLLFKLYHDGMTSPAALSSELSRHFGKTPLSSKSSAEFE KNRKRIQGIRSAVKVRSPTGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11141; Mature: 11010
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNLNMSVRTSDLAVLQAVLDDAGYDCTSSLADPRYYNVAVRLLFKLYHDGMTSPAALS CCCCCCCEECHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH SELSRHFGKTPLSSKSSAEFEKNRKRIQGIRSAVKVRSPTGA HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SSNLNMSVRTSDLAVLQAVLDDAGYDCTSSLADPRYYNVAVRLLFKLYHDGMTSPAALS CCCCCCEECHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH SELSRHFGKTPLSSKSSAEFEKNRKRIQGIRSAVKVRSPTGA HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA