Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360837
Identifier: 86360837
GI number: 86360837
Start: 109773
End: 111848
Strand: Reverse
Name: 86360837
Synonym: RHE_PF00104
Alternate gene names: NA
Gene position: 111848-109773 (Counterclockwise)
Preceding gene: 86360838
Following gene: 86360820
Centisome position: 17.41
GC content: 62.19
Gene sequence:
>2076_bases ATGAGTGAGGATGGGACGTCGGAATTCGCTCGAGCGCTGGCGGCCGAGGTGGATGAGGCGCGTGACGATCCAACAATAGA TATCCCGTCGACGGAAGCGCTTTTCACACGCATCGTCATCGATGAGCTGGAGGAGATCGGTCACTTCGAGGCGGCCTTTG ATCTTCCTCAGGAGGGAAAGGTCGGCCGGTCACCCTTCCGGATCAGCGGGTATGCCATTGATGAGGACGCTGGCCAGCTG ACGCTCTTCGCAACGCATTACTCTGGCGACGTGCCGCCGCGTCGGGTTCCCGCCTCGGACCTGCTGAAGACCGCAGAAAG GGCCGGGACGTATGTAGCCGCCTGCATTGGTGGTCTGGCGGATCGCATTGAGCCGTCCAATACAGAAGCCGGGGACTTGG CGCGCCGCGTGGCAGCGCTCGGCGAGCGCATCGATCGCTTCCGGATCGTCGTGCTGACCGACTGCATCGCCGGTGGCACG CTGCCGGCGGCGGTCGACAGCCATGGAAAGACAGTCGAGATCGAACTCTATGACATCGTCCGGCTACACAGGGTTCTTGG AGAAGGTCAGACCCGCGCTGATATCGACGTTGACCTTGTCGCTTTTGCCGGCCACCGCATCGCCTGTTTGCCGGTGGCTT CCGGCGCAGGGCACTACGAGGCGTTCCTTGCAGCTTTCCCGGGTGAGGCGCTATCGCGCATCTATGATCGGTACGGCACG CATCTCCTTGAGCTGAATGTTCGCGCATTTCTCGGACTTTCCGGGCGCAAGTCGGTGAATGCCGAGCTGCGCCGCACGCT GGTCGAACAGCCGGAGATGTTCCTCGCCTTCAACAACGGCGTGGTCGCAACGGCGGACGAAGTGCGGCTCGAGCATGAAG GCGGCGCGGTGTACCTGACCGGCCTGCGGGGCCTGCAGATCGTTAACGGGGGACAGACGACAGCGTCGCTGCACCGCGCC CGGCGCAAGGAAAGCGTCGCACTTGGCGCAGTGGAGGTACCGGTCAAGATTATCCGCGTGACAGAGGGGGATCTGGAGCA AATGGTTTCCTCGATCTCTCGCGCTGCCAACCGGCAGAATACTGTGCAGCAGGCCGACTTCTCGGCCAACGATCCGTTCC ATCGCGAGGTAGAGACGCTGGCCAACAACGCGTGGCTCGAAAACGGGCGCGGGCGCTGGTTCTATGAGCGCGCGCGCGGA TCATGGCTTGCCGCCGAGCAAAAAGCTTCTTACCGCACCACCGAGCAGCGCGCCTTCCGGGAGCAGACGCCAAAGGCTCG ACGTTTCGGCAAGCTCGACCTCGCGCGTTATCTGTCGGCATGGGACGGCTTCCCTTGGCGCGTCGCTTTTGGCGGCCAGA AGAACTTCCAGGCGTTCATGCAACGGCGTAAGGAGCAGACGGCTCCGCCTCCGGACGCTGCCTGGTTCCGTCGTCTGATT GCGCTCACTATCCTCTATCGTACAACTGAGCGATTAGTCCGAACGATGAAGTTTCCGGCGTACGGCGCCAATATTGTTGC GTACCTGATCGCCGCGCTGGGCGAACGAACGGGCGGCCGTATCGATTTCGACTTGGTGTGGCGCCAACAAAGGCTCTCGA TGGAGATGGAAACACTCATCTCAATCTGGGCGCCGCTGATCGATCAGGCGCTACGCGCCAGTGTCGGTAGTCGCAATCCG ACTGAGTGGTTCAAGAAGGAAGACTGCTGGGTCGAAGTCCGCAATCACCTGCCGACGCTGACGGATCCGCTCCCGGCGGA GCTGGACGGCACCTCGCCAAACGCGGCCGGCTCCGTGGCTGAACGGCACGGACCGACTCTGCAGGCCGCTGACTATGATC GGATCGAAGAATGTATGCGTGTCCCGTCAGCGGTATGGGTGGCGACAGCTGAGGCCGGGCAACGCAGCGGGGTGCTTCAT TACAAGCTCGCCAGCATCTGCATAACACTCGCCAACTATGCGGCAGGCGGTTGGAGCCGGCGTCCTTCAATCAAGCAAGC GAAGCATGGGCTGGAGAGTGTTGCCAAGGTGCGCGCCGCTGGCCTATTCGATGAGACCCAGCGCGAAGTTGGATAG
Upstream 100 bases:
>100_bases CTCGGGATCGCGGAAGCGACCTATCAGATCGACGTGCGCGCGCTCGTCAGCTTTGCCGTCGATGCGGCGGCGGTATTGAA TACGTTCGGGGGGACGGGCG
Downstream 100 bases:
>100_bases AGAAGCAGTCATTGTCGGCCGGTGAAGCAAGCTTTTATTCGCCTTGCGCAACCTCTTCCCGAATGGAGCTTATCGCGTCC AATCCGATTGGACATATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MSEDGTSEFARALAAEVDEARDDPTIDIPSTEALFTRIVIDELEEIGHFEAAFDLPQEGKVGRSPFRISGYAIDEDAGQL TLFATHYSGDVPPRRVPASDLLKTAERAGTYVAACIGGLADRIEPSNTEAGDLARRVAALGERIDRFRIVVLTDCIAGGT LPAAVDSHGKTVEIELYDIVRLHRVLGEGQTRADIDVDLVAFAGHRIACLPVASGAGHYEAFLAAFPGEALSRIYDRYGT HLLELNVRAFLGLSGRKSVNAELRRTLVEQPEMFLAFNNGVVATADEVRLEHEGGAVYLTGLRGLQIVNGGQTTASLHRA RRKESVALGAVEVPVKIIRVTEGDLEQMVSSISRAANRQNTVQQADFSANDPFHREVETLANNAWLENGRGRWFYERARG SWLAAEQKASYRTTEQRAFREQTPKARRFGKLDLARYLSAWDGFPWRVAFGGQKNFQAFMQRRKEQTAPPPDAAWFRRLI ALTILYRTTERLVRTMKFPAYGANIVAYLIAALGERTGGRIDFDLVWRQQRLSMEMETLISIWAPLIDQALRASVGSRNP TEWFKKEDCWVEVRNHLPTLTDPLPAELDGTSPNAAGSVAERHGPTLQAADYDRIEECMRVPSAVWVATAEAGQRSGVLH YKLASICITLANYAAGGWSRRPSIKQAKHGLESVAKVRAAGLFDETQREVG
Sequences:
>Translated_691_residues MSEDGTSEFARALAAEVDEARDDPTIDIPSTEALFTRIVIDELEEIGHFEAAFDLPQEGKVGRSPFRISGYAIDEDAGQL TLFATHYSGDVPPRRVPASDLLKTAERAGTYVAACIGGLADRIEPSNTEAGDLARRVAALGERIDRFRIVVLTDCIAGGT LPAAVDSHGKTVEIELYDIVRLHRVLGEGQTRADIDVDLVAFAGHRIACLPVASGAGHYEAFLAAFPGEALSRIYDRYGT HLLELNVRAFLGLSGRKSVNAELRRTLVEQPEMFLAFNNGVVATADEVRLEHEGGAVYLTGLRGLQIVNGGQTTASLHRA RRKESVALGAVEVPVKIIRVTEGDLEQMVSSISRAANRQNTVQQADFSANDPFHREVETLANNAWLENGRGRWFYERARG SWLAAEQKASYRTTEQRAFREQTPKARRFGKLDLARYLSAWDGFPWRVAFGGQKNFQAFMQRRKEQTAPPPDAAWFRRLI ALTILYRTTERLVRTMKFPAYGANIVAYLIAALGERTGGRIDFDLVWRQQRLSMEMETLISIWAPLIDQALRASVGSRNP TEWFKKEDCWVEVRNHLPTLTDPLPAELDGTSPNAAGSVAERHGPTLQAADYDRIEECMRVPSAVWVATAEAGQRSGVLH YKLASICITLANYAAGGWSRRPSIKQAKHGLESVAKVRAAGLFDETQREVG >Mature_690_residues SEDGTSEFARALAAEVDEARDDPTIDIPSTEALFTRIVIDELEEIGHFEAAFDLPQEGKVGRSPFRISGYAIDEDAGQLT LFATHYSGDVPPRRVPASDLLKTAERAGTYVAACIGGLADRIEPSNTEAGDLARRVAALGERIDRFRIVVLTDCIAGGTL PAAVDSHGKTVEIELYDIVRLHRVLGEGQTRADIDVDLVAFAGHRIACLPVASGAGHYEAFLAAFPGEALSRIYDRYGTH LLELNVRAFLGLSGRKSVNAELRRTLVEQPEMFLAFNNGVVATADEVRLEHEGGAVYLTGLRGLQIVNGGQTTASLHRAR RKESVALGAVEVPVKIIRVTEGDLEQMVSSISRAANRQNTVQQADFSANDPFHREVETLANNAWLENGRGRWFYERARGS WLAAEQKASYRTTEQRAFREQTPKARRFGKLDLARYLSAWDGFPWRVAFGGQKNFQAFMQRRKEQTAPPPDAAWFRRLIA LTILYRTTERLVRTMKFPAYGANIVAYLIAALGERTGGRIDFDLVWRQQRLSMEMETLISIWAPLIDQALRASVGSRNPT EWFKKEDCWVEVRNHLPTLTDPLPAELDGTSPNAAGSVAERHGPTLQAADYDRIEECMRVPSAVWVATAEAGQRSGVLHY KLASICITLANYAAGGWSRRPSIKQAKHGLESVAKVRAAGLFDETQREVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76330; Mature: 76199
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDGTSEFARALAAEVDEARDDPTIDIPSTEALFTRIVIDELEEIGHFEAAFDLPQEGK CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC VGRSPFRISGYAIDEDAGQLTLFATHYSGDVPPRRVPASDLLKTAERAGTYVAACIGGLA CCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH DRIEPSNTEAGDLARRVAALGERIDRFRIVVLTDCIAGGTLPAAVDSHGKTVEIELYDIV HCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEHHHCCCCCCHHHCCCCCEEEEEHHHHH RLHRVLGEGQTRADIDVDLVAFAGHRIACLPVASGAGHYEAFLAAFPGEALSRIYDRYGT HHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHCC HLLELNVRAFLGLSGRKSVNAELRRTLVEQPEMFLAFNNGVVATADEVRLEHEGGAVYLT EEEEEEHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEHHHEEEEECCCEEEEE GLRGLQIVNGGQTTASLHRARRKESVALGAVEVPVKIIRVTEGDLEQMVSSISRAANRQN ECCCEEEECCCCHHHHHHHHHHHHHHEECEEECCEEEEEECCHHHHHHHHHHHHHHHHHH TVQQADFSANDPFHREVETLANNAWLENGRGRWFYERARGSWLAAEQKASYRTTEQRAFR HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHH EQTPKARRFGKLDLARYLSAWDGFPWRVAFGGQKNFQAFMQRRKEQTAPPPDAAWFRRLI HCCCHHHHCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHH ALTILYRTTERLVRTMKFPAYGANIVAYLIAALGERTGGRIDFDLVWRQQRLSMEMETLI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH SIWAPLIDQALRASVGSRNPTEWFKKEDCWVEVRNHLPTLTDPLPAELDGTSPNAAGSVA HHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH ERHGPTLQAADYDRIEECMRVPSAVWVATAEAGQRSGVLHYKLASICITLANYAAGGWSR HHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC RPSIKQAKHGLESVAKVRAAGLFDETQREVG CCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure SEDGTSEFARALAAEVDEARDDPTIDIPSTEALFTRIVIDELEEIGHFEAAFDLPQEGK CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC VGRSPFRISGYAIDEDAGQLTLFATHYSGDVPPRRVPASDLLKTAERAGTYVAACIGGLA CCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH DRIEPSNTEAGDLARRVAALGERIDRFRIVVLTDCIAGGTLPAAVDSHGKTVEIELYDIV HCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEHHHCCCCCCHHHCCCCCEEEEEHHHHH RLHRVLGEGQTRADIDVDLVAFAGHRIACLPVASGAGHYEAFLAAFPGEALSRIYDRYGT HHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHCC HLLELNVRAFLGLSGRKSVNAELRRTLVEQPEMFLAFNNGVVATADEVRLEHEGGAVYLT EEEEEEHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEHHHEEEEECCCEEEEE GLRGLQIVNGGQTTASLHRARRKESVALGAVEVPVKIIRVTEGDLEQMVSSISRAANRQN ECCCEEEECCCCHHHHHHHHHHHHHHEECEEECCEEEEEECCHHHHHHHHHHHHHHHHHH TVQQADFSANDPFHREVETLANNAWLENGRGRWFYERARGSWLAAEQKASYRTTEQRAFR HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHH EQTPKARRFGKLDLARYLSAWDGFPWRVAFGGQKNFQAFMQRRKEQTAPPPDAAWFRRLI HCCCHHHHCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHH ALTILYRTTERLVRTMKFPAYGANIVAYLIAALGERTGGRIDFDLVWRQQRLSMEMETLI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH SIWAPLIDQALRASVGSRNPTEWFKKEDCWVEVRNHLPTLTDPLPAELDGTSPNAAGSVA HHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH ERHGPTLQAADYDRIEECMRVPSAVWVATAEAGQRSGVLHYKLASICITLANYAAGGWSR HHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC RPSIKQAKHGLESVAKVRAAGLFDETQREVG CCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA