Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360838
Identifier: 86360838
GI number: 86360838
Start: 111841
End: 112836
Strand: Reverse
Name: 86360838
Synonym: RHE_PF00105
Alternate gene names: NA
Gene position: 112836-111841 (Counterclockwise)
Preceding gene: 86360839
Following gene: 86360837
Centisome position: 17.56
GC content: 63.35
Gene sequence:
>996_bases ATGAGCGTCACTCCTGACGCGGCGGCGTTACTGAAGGAATGGGACGAGTTGGCTGCCGTAGCCCGGGGGGACCGGCTGTA TCGCAGCCGACGGCTTTCTCGCCCGGTGCAGCTCGATCTCCGCGCGGGTCTGCGGGAAGCTGACGGCGCGCCATGTCTCG TTGCGTTGCCGGGTGGCGCTGGCAATTCCATTACTTCTTTCGAGACCGCAGGCCTGAGGCTATCCCGAGCCGCTGATCCC GCCGGCCTCCTGCTGGTTCTTTCACTCGAAGAGACCTCCCGACGTGATCTTTTCGCCGAGATCTGCAGCGACTGCGTCCG CTCGGTCCTACGCGCTGAGGATGAAGGCGAAACTGAATTGGTCACAGTCTTCGCCGCCCGTCTCGCTGCGTGGCGCGCGT TTCTGCGCGATCAGACCCCTGGTCTGTCGAGAAACGAGATAGTCGGGCTGATCGGTGAACTCCTCGTCCTCGATCGGATG CTGGACGAAAACACTGAAGCGGTCGCCGCGTGGAAGGCTCCCGATGACGGGCTACATGATTTCGTGCTCTTCAGTCATGG CCTTGAGGTCAAGACTGCGCTGGGCGCGGCGCGCCGACTCCATATTTCGACACTCGATCAGCTTGACGACGCCGGCCTTG TTTCCCTTCACGTTGCGCACGTCCGTCTGGTGGAGTCGGTTGCCGGCGAGACCCTCGGCCAGATCGCCGCACGGATTGAA CAGCGGCTAAATGGCGAGCGGGCGCGTGGCACGTTTCGCAACGCGCTTTTGCGTCGCGGCCTTGCACCCCGGGGCGATAC GATCTCCGGGCCGCGGGTTGCTTGCGTAGGCATGGATTGTTACGCGGTCCACGATGGTTTCCCGCGGCTTCGAAGGAGCG ATGTAGCGCTCGGGATCGCGGAAGCGACCTATCAGATCGACGTGCGCGCGCTCGTCAGCTTTGCCGTCGATGCGGCGGCG GTATTGAATACGTTCGGGGGGACGGGCGATGAGTGA
Upstream 100 bases:
>100_bases CAGGAATCCCGCTCTGGGGAGTAGTGGTGAGTTTCCCAACCTCCCCGACAGCATCGGCCGAGTGGCGCTGGGAAAATACC GTCCAGCAGCGGGCGGCGCC
Downstream 100 bases:
>100_bases GGATGGGACGTCGGAATTCGCTCGAGCGCTGGCGGCCGAGGTGGATGAGGCGCGTGACGATCCAACAATAGATATCCCGT CGACGGAAGCGCTTTTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSVTPDAAALLKEWDELAAVARGDRLYRSRRLSRPVQLDLRAGLREADGAPCLVALPGGAGNSITSFETAGLRLSRAADP AGLLLVLSLEETSRRDLFAEICSDCVRSVLRAEDEGETELVTVFAARLAAWRAFLRDQTPGLSRNEIVGLIGELLVLDRM LDENTEAVAAWKAPDDGLHDFVLFSHGLEVKTALGAARRLHISTLDQLDDAGLVSLHVAHVRLVESVAGETLGQIAARIE QRLNGERARGTFRNALLRRGLAPRGDTISGPRVACVGMDCYAVHDGFPRLRRSDVALGIAEATYQIDVRALVSFAVDAAA VLNTFGGTGDE
Sequences:
>Translated_331_residues MSVTPDAAALLKEWDELAAVARGDRLYRSRRLSRPVQLDLRAGLREADGAPCLVALPGGAGNSITSFETAGLRLSRAADP AGLLLVLSLEETSRRDLFAEICSDCVRSVLRAEDEGETELVTVFAARLAAWRAFLRDQTPGLSRNEIVGLIGELLVLDRM LDENTEAVAAWKAPDDGLHDFVLFSHGLEVKTALGAARRLHISTLDQLDDAGLVSLHVAHVRLVESVAGETLGQIAARIE QRLNGERARGTFRNALLRRGLAPRGDTISGPRVACVGMDCYAVHDGFPRLRRSDVALGIAEATYQIDVRALVSFAVDAAA VLNTFGGTGDE >Mature_330_residues SVTPDAAALLKEWDELAAVARGDRLYRSRRLSRPVQLDLRAGLREADGAPCLVALPGGAGNSITSFETAGLRLSRAADPA GLLLVLSLEETSRRDLFAEICSDCVRSVLRAEDEGETELVTVFAARLAAWRAFLRDQTPGLSRNEIVGLIGELLVLDRML DENTEAVAAWKAPDDGLHDFVLFSHGLEVKTALGAARRLHISTLDQLDDAGLVSLHVAHVRLVESVAGETLGQIAARIEQ RLNGERARGTFRNALLRRGLAPRGDTISGPRVACVGMDCYAVHDGFPRLRRSDVALGIAEATYQIDVRALVSFAVDAAAV LNTFGGTGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35571; Mature: 35440
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTPDAAALLKEWDELAAVARGDRLYRSRRLSRPVQLDLRAGLREADGAPCLVALPGGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCEEEEECCCC GNSITSFETAGLRLSRAADPAGLLLVLSLEETSRRDLFAEICSDCVRSVLRAEDEGETEL CCCCCCHHHCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VTVFAARLAAWRAFLRDQTPGLSRNEIVGLIGELLVLDRMLDENTEAVAAWKAPDDGLHD HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH FVLFSHGLEVKTALGAARRLHISTLDQLDDAGLVSLHVAHVRLVESVAGETLGQIAARIE HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLNGERARGTFRNALLRRGLAPRGDTISGPRVACVGMDCYAVHDGFPRLRRSDVALGIA HHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHEEEE EATYQIDVRALVSFAVDAAAVLNTFGGTGDE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SVTPDAAALLKEWDELAAVARGDRLYRSRRLSRPVQLDLRAGLREADGAPCLVALPGGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCEEEEECCCC GNSITSFETAGLRLSRAADPAGLLLVLSLEETSRRDLFAEICSDCVRSVLRAEDEGETEL CCCCCCHHHCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VTVFAARLAAWRAFLRDQTPGLSRNEIVGLIGELLVLDRMLDENTEAVAAWKAPDDGLHD HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH FVLFSHGLEVKTALGAARRLHISTLDQLDDAGLVSLHVAHVRLVESVAGETLGQIAARIE HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLNGERARGTFRNALLRRGLAPRGDTISGPRVACVGMDCYAVHDGFPRLRRSDVALGIA HHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHEEEE EATYQIDVRALVSFAVDAAAVLNTFGGTGDE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA