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The map label for this gene is nahR [H]

Identifier: 86360749

GI number: 86360749

Start: 14842

End: 15660

Strand: Reverse

Name: nahR [H]

Synonym: RHE_PF00015

Alternate gene names: 86360749

Gene position: 15660-14842 (Counterclockwise)

Preceding gene: 86360753

Following gene: 86360745

Centisome position: 2.44

GC content: 60.93

Gene sequence:

>819_bases
ATGATGCCGACTGCGCGGGCGCTCGAACTGCGTCAACCGATAAGACAGGCCCTGGCCGGCATGGAAGAGGCGTTGGCGAC
GAACGCTGCGTTCGACCCCACCACGTCAACCCGATCCTTCGTACTGATAGGATCGGACTACTTCTCCTCGCTGTTGATGC
CTCCCCTCGCTGCGCGCGTGGCCAAAACGGCGCCCTTCGTCACCCTGCAGATGATCGATCATGCTTCGTCCGAAGTCTTC
GAGATGCTGCGTGACGGCCGGGCTGATATCGTTATTGATCGATCGCTCGAACCGCCTGAATGGGTTATTAGCCGCAAGCT
GTTCCAGTCATGGCTGGTATGCATTGCGAAGCGAGGACATCCGCTCCTTGCCAGTCATGGCATTTGTCCAGGAGATGCCA
TACCGGCGGACGTCTTCTGCGCTGTTCCCCACGTCCTGCGCTCGGCCGATGGCAGCAGGACGGGGACGATTGATCCCGCC
CTTGCACGCCTGGGTCTCGCCAGGCGTGTCATGGTCACGGTGCCGCATTTTCAGGCCGTGGCTCTTGCCGTTGAAGCGAG
CGAGATGCTGGGGAGCATTCCGGTTCATTTCGCTCGCATGTTGACCGGCCGGCTGATGCTCGACGTATTCAGGCCGCCGA
TGGATTCGCCGAAAATGGACGTGACCATGTACTGGCTTCGCCGTTTCGATCGCGATCCCGGGAGTGTGTGGCTCCGGGAT
CAGATCGCACATGCCCTCTCCGCACCGGAGCCGCCTTGGTTTCCAATAGCGACCGAGCCAGATCACAAGAGGCTTGAAGC
CGGCAGCGCACGTGCCTGA

Upstream 100 bases:

>100_bases
CGGCGAGCGTGTCGGCCTGTCCCAACCGGCTGTGAGTTCGGCGTTGGGGAGACTGCGCGCGCTCTTGGATGACGAATTAT
TCGTCCGAGAAGGCAATCAG

Downstream 100 bases:

>100_bases
ATGGCGGTCTTCTCAGAAAAGGCGGACAGCCTCGAACAACGCGGTGAGCCCGATGCCGCCGCCGATGCCGATCATGGCGA
GGCCGGTTGCGCGTGGTGTC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MMPTARALELRQPIRQALAGMEEALATNAAFDPTTSTRSFVLIGSDYFSSLLMPPLAARVAKTAPFVTLQMIDHASSEVF
EMLRDGRADIVIDRSLEPPEWVISRKLFQSWLVCIAKRGHPLLASHGICPGDAIPADVFCAVPHVLRSADGSRTGTIDPA
LARLGLARRVMVTVPHFQAVALAVEASEMLGSIPVHFARMLTGRLMLDVFRPPMDSPKMDVTMYWLRRFDRDPGSVWLRD
QIAHALSAPEPPWFPIATEPDHKRLEAGSARA

Sequences:

>Translated_272_residues
MMPTARALELRQPIRQALAGMEEALATNAAFDPTTSTRSFVLIGSDYFSSLLMPPLAARVAKTAPFVTLQMIDHASSEVF
EMLRDGRADIVIDRSLEPPEWVISRKLFQSWLVCIAKRGHPLLASHGICPGDAIPADVFCAVPHVLRSADGSRTGTIDPA
LARLGLARRVMVTVPHFQAVALAVEASEMLGSIPVHFARMLTGRLMLDVFRPPMDSPKMDVTMYWLRRFDRDPGSVWLRD
QIAHALSAPEPPWFPIATEPDHKRLEAGSARA
>Mature_272_residues
MMPTARALELRQPIRQALAGMEEALATNAAFDPTTSTRSFVLIGSDYFSSLLMPPLAARVAKTAPFVTLQMIDHASSEVF
EMLRDGRADIVIDRSLEPPEWVISRKLFQSWLVCIAKRGHPLLASHGICPGDAIPADVFCAVPHVLRSADGSRTGTIDPA
LARLGLARRVMVTVPHFQAVALAVEASEMLGSIPVHFARMLTGRLMLDVFRPPMDSPKMDVTMYWLRRFDRDPGSVWLRD
QIAHALSAPEPPWFPIATEPDHKRLEAGSARA

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 29984; Mature: 29984

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPTARALELRQPIRQALAGMEEALATNAAFDPTTSTRSFVLIGSDYFSSLLMPPLAARV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHH
AKTAPFVTLQMIDHASSEVFEMLRDGRADIVIDRSLEPPEWVISRKLFQSWLVCIAKRGH
HHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
PLLASHGICPGDAIPADVFCAVPHVLRSADGSRTGTIDPALARLGLARRVMVTVPHFQAV
CEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCHHHH
ALAVEASEMLGSIPVHFARMLTGRLMLDVFRPPMDSPKMDVTMYWLRRFDRDPGSVWLRD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHH
QIAHALSAPEPPWFPIATEPDHKRLEAGSARA
HHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MMPTARALELRQPIRQALAGMEEALATNAAFDPTTSTRSFVLIGSDYFSSLLMPPLAARV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHH
AKTAPFVTLQMIDHASSEVFEMLRDGRADIVIDRSLEPPEWVISRKLFQSWLVCIAKRGH
HHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
PLLASHGICPGDAIPADVFCAVPHVLRSADGSRTGTIDPALARLGLARRVMVTVPHFQAV
CEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCHHHH
ALAVEASEMLGSIPVHFARMLTGRLMLDVFRPPMDSPKMDVTMYWLRRFDRDPGSVWLRD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHH
QIAHALSAPEPPWFPIATEPDHKRLEAGSARA
HHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]