| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is lnt
Identifier: 85859384
GI number: 85859384
Start: 1586182
End: 1587726
Strand: Direct
Name: lnt
Synonym: SYN_02789
Alternate gene names: 85859384
Gene position: 1586182-1587726 (Clockwise)
Preceding gene: 85859383
Following gene: 85859385
Centisome position: 49.89
GC content: 42.39
Gene sequence:
>1545_bases GTGCAACTTTCTTATCTTGCTCTTCACCGCAAAACAATAGCCGTAGCAGCTTTATCCAGTCTGCTTCTTTTTTTATCCTT TCCCAAATATGGCACTGGTCTGTTTGCTTGGATTGCCCTGATTCCTTTTTTGTACACACTGCGTGAAAAGACTGTTTATC AGGGAGCGGTCATTGGATTTTTTGTCGGCATGTTGTTTCATGTCGGTCTTATTTACTGGATTGTTTATGTTATCGTTGTT TACGGAAATCTTCCTTATTACGCTGCAATCTTTTTGATGCTGCTGCTGGCAGCTTATTTGAGCATCTATTTTGCCCTTTT TGCGGCAGGTCTTATTCATCTGAAAAATAAATCCATTCCGTTTATTATTTCTGCTCCACCACTCTGGATTATTCTCGAAT TCGTAAAATCAAATCTCTTTACTGGATTTCCTTGGGAGAATCTTGCGTATTCTCAGTATCTTAATCATCATGTCATTCAG ATTGCCGATTTAGCAGGGGGATACGGAATATCTTTTGTCATCGTTCTGGTAAATGTTATCGGATATGATCTTTTTTTTGA CCGCATTACAAAGAAAAAAATTGCTTTGGAGATTGCCCTTGGAATAGCCTTGATTTCTTCCATTTATAGTTATGGAGTTT TAAGGGGAATGCAGATCGATATGGCCGTTGCAAAGGCACCTTCAATACCGGTAACCCTGGTACAGGGTAACATAGACCAA AGCCTGAAATGGAATGATCACTATCAGAAGGAAACGATCGACATTTACCAGAAACTCTCGCTCGCTCCACCGGAGAAGAC TTCACCCGGCATGATCATCTGGCCGGAGACTGCCGTTCCTTTCTATTTTCAGAATGTGGATGACCTGCACCGAAGGATCG TATCGCTGGCCGTGCAAACGGAAAACTGGATTCTCTTCGGCAGCCCCAGCTATGCAGCCGAGGAGGGAAAACTTTCTTTT CTGAACACGGCGTTCCTTTTATCTCCCCATGGCAACATGGTTGCTCAATACAATAAAGTTCATCTGGTCCCCTATGGAGA ATATGTTCCTTTGCGTCGATTCTTTCCCTTCATAGGCAAGATGGCGGCAGGGGTAGGCGATTTTCAGGCCGGTGAAGGAT TCATCCCGATTAAAGCGGGTGAATGGAAAATCGGCGTTCTTATCTGCTACGAGGGCATACTTTCCGAAGCTGGTAGAATC TATAAAAATGAGGGAGCGGGGCTGCTCGTCAATATTACCAATGATGCCTGGTTTGGCAGAACTTCAGCCCCCTACCAGCA TCTTTCAATGACCGTATTCAGGGCAGTGGAAAACAGGTTGTTTCTTGCAAGAGCTGCAAATACCGGAATAAGTGCCATCA TAGATCCGACGGGAAAGATTTTGATGAAATCGTCAATCTTTGAGAGGACTGCTATTCAGGGACACATAAAATATTTAAAT TTACCGACTTTGTATGCAAAATATGGGGATATTTTTGTATATGTTTGTTTTATCTTGCTGATATCCATTTATCTAATGTC TGAGAAAAGGAGAATAACGAAATGA
Upstream 100 bases:
>100_bases GTAATGGATCCTAAGTTGGGTAATAATTGAGGACTTTGTAAAAGAAATTGTCAGCGGAATTCGTGATGAGCTTGACATCA AAAAAAGATAGAGTTTAATC
Downstream 100 bases:
>100_bases TTGAAGATTTACCCGCAGCTCTGGCTGACTTGGAAAAAAAAATAGAAACGATAGGGGAGTGCCTTTGACATCGTCGAGAA AGAAAAACGGATTCAGGAAC
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MQLSYLALHRKTIAVAALSSLLLFLSFPKYGTGLFAWIALIPFLYTLREKTVYQGAVIGFFVGMLFHVGLIYWIVYVIVV YGNLPYYAAIFLMLLLAAYLSIYFALFAAGLIHLKNKSIPFIISAPPLWIILEFVKSNLFTGFPWENLAYSQYLNHHVIQ IADLAGGYGISFVIVLVNVIGYDLFFDRITKKKIALEIALGIALISSIYSYGVLRGMQIDMAVAKAPSIPVTLVQGNIDQ SLKWNDHYQKETIDIYQKLSLAPPEKTSPGMIIWPETAVPFYFQNVDDLHRRIVSLAVQTENWILFGSPSYAAEEGKLSF LNTAFLLSPHGNMVAQYNKVHLVPYGEYVPLRRFFPFIGKMAAGVGDFQAGEGFIPIKAGEWKIGVLICYEGILSEAGRI YKNEGAGLLVNITNDAWFGRTSAPYQHLSMTVFRAVENRLFLARAANTGISAIIDPTGKILMKSSIFERTAIQGHIKYLN LPTLYAKYGDIFVYVCFILLISIYLMSEKRRITK
Sequences:
>Translated_514_residues MQLSYLALHRKTIAVAALSSLLLFLSFPKYGTGLFAWIALIPFLYTLREKTVYQGAVIGFFVGMLFHVGLIYWIVYVIVV YGNLPYYAAIFLMLLLAAYLSIYFALFAAGLIHLKNKSIPFIISAPPLWIILEFVKSNLFTGFPWENLAYSQYLNHHVIQ IADLAGGYGISFVIVLVNVIGYDLFFDRITKKKIALEIALGIALISSIYSYGVLRGMQIDMAVAKAPSIPVTLVQGNIDQ SLKWNDHYQKETIDIYQKLSLAPPEKTSPGMIIWPETAVPFYFQNVDDLHRRIVSLAVQTENWILFGSPSYAAEEGKLSF LNTAFLLSPHGNMVAQYNKVHLVPYGEYVPLRRFFPFIGKMAAGVGDFQAGEGFIPIKAGEWKIGVLICYEGILSEAGRI YKNEGAGLLVNITNDAWFGRTSAPYQHLSMTVFRAVENRLFLARAANTGISAIIDPTGKILMKSSIFERTAIQGHIKYLN LPTLYAKYGDIFVYVCFILLISIYLMSEKRRITK >Mature_514_residues MQLSYLALHRKTIAVAALSSLLLFLSFPKYGTGLFAWIALIPFLYTLREKTVYQGAVIGFFVGMLFHVGLIYWIVYVIVV YGNLPYYAAIFLMLLLAAYLSIYFALFAAGLIHLKNKSIPFIISAPPLWIILEFVKSNLFTGFPWENLAYSQYLNHHVIQ IADLAGGYGISFVIVLVNVIGYDLFFDRITKKKIALEIALGIALISSIYSYGVLRGMQIDMAVAKAPSIPVTLVQGNIDQ SLKWNDHYQKETIDIYQKLSLAPPEKTSPGMIIWPETAVPFYFQNVDDLHRRIVSLAVQTENWILFGSPSYAAEEGKLSF LNTAFLLSPHGNMVAQYNKVHLVPYGEYVPLRRFFPFIGKMAAGVGDFQAGEGFIPIKAGEWKIGVLICYEGILSEAGRI YKNEGAGLLVNITNDAWFGRTSAPYQHLSMTVFRAVENRLFLARAANTGISAIIDPTGKILMKSSIFERTAIQGHIKYLN LPTLYAKYGDIFVYVCFILLISIYLMSEKRRITK
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=518, Percent_Identity=32.046332046332, Blast_Score=177, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 57718; Mature: 57718
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSYLALHRKTIAVAALSSLLLFLSFPKYGTGLFAWIALIPFLYTLREKTVYQGAVIGF CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGMLFHVGLIYWIVYVIVVYGNLPYYAAIFLMLLLAAYLSIYFALFAAGLIHLKNKSIP HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC FIISAPPLWIILEFVKSNLFTGFPWENLAYSQYLNHHVIQIADLAGGYGISFVIVLVNVI EEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHH GYDLFFDRITKKKIALEIALGIALISSIYSYGVLRGMQIDMAVAKAPSIPVTLVQGNIDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCEEEEECCCCC SLKWNDHYQKETIDIYQKLSLAPPEKTSPGMIIWPETAVPFYFQNVDDLHRRIVSLAVQT CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHEEE ENWILFGSPSYAAEEGKLSFLNTAFLLSPHGNMVAQYNKVHLVPYGEYVPLRRFFPFIGK CCEEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEECEEEEEECCCCCCHHHHHHHHHH MAAGVGDFQAGEGFIPIKAGEWKIGVLICYEGILSEAGRIYKNEGAGLLVNITNDAWFGR HHCCCCCCCCCCCEEEEECCCEEEEEEEEEHHHHHHCCCEEECCCCEEEEEECCCCCCCC TSAPYQHLSMTVFRAVENRLFLARAANTGISAIIDPTGKILMKSSIFERTAIQGHIKYLN CCCCHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCEEEEEC LPTLYAKYGDIFVYVCFILLISIYLMSEKRRITK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQLSYLALHRKTIAVAALSSLLLFLSFPKYGTGLFAWIALIPFLYTLREKTVYQGAVIGF CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGMLFHVGLIYWIVYVIVVYGNLPYYAAIFLMLLLAAYLSIYFALFAAGLIHLKNKSIP HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC FIISAPPLWIILEFVKSNLFTGFPWENLAYSQYLNHHVIQIADLAGGYGISFVIVLVNVI EEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHH GYDLFFDRITKKKIALEIALGIALISSIYSYGVLRGMQIDMAVAKAPSIPVTLVQGNIDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCEEEEECCCCC SLKWNDHYQKETIDIYQKLSLAPPEKTSPGMIIWPETAVPFYFQNVDDLHRRIVSLAVQT CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHEEE ENWILFGSPSYAAEEGKLSFLNTAFLLSPHGNMVAQYNKVHLVPYGEYVPLRRFFPFIGK CCEEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEECEEEEEECCCCCCHHHHHHHHHH MAAGVGDFQAGEGFIPIKAGEWKIGVLICYEGILSEAGRIYKNEGAGLLVNITNDAWFGR HHCCCCCCCCCCCEEEEECCCEEEEEEEEEHHHHHHCCCEEECCCCEEEEEECCCCCCCC TSAPYQHLSMTVFRAVENRLFLARAANTGISAIIDPTGKILMKSSIFERTAIQGHIKYLN CCCCHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCEEEEEC LPTLYAKYGDIFVYVCFILLISIYLMSEKRRITK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA