Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859351

Identifier: 85859351

GI number: 85859351

Start: 1547922

End: 1548311

Strand: Direct

Name: 85859351

Synonym: SYN_03061

Alternate gene names: NA

Gene position: 1547922-1548311 (Clockwise)

Preceding gene: 85859350

Following gene: 85859352

Centisome position: 48.69

GC content: 52.82

Gene sequence:

>390_bases
TTGATGCGTACAGAGAACAAAGGCAGGCGAAATGAGTGCGGTTTTACACTTATTGAACTGATGATTGTCATCGCGATTCT
TGGGGTGCTTGCAACGATCGCCGTTCCCCGGTTTCTCGTTTATCGTCAGAGCGCCTGTGATTCACAGGCAAAGACGGATG
CCAGAAACTTTTATACGGCTTCCATGTCCGATGCGATCGACAGCAGCGGGGATAAGACTTTCAACAGCACAAATCCACCT
CCCAGTTATCGGGGGCTTTCTCCCGTCAGCGGGTCATTCGTTTTTATGGCCGCCACTCATACCGCGACCTGCGATGCGGC
CTTCAAGCATCCGCAGGGGTCAAAGACCTTCACTCTCAATTCGGAAGGCCGTATCACCGCCTTCCCCTGA

Upstream 100 bases:

>100_bases
GTACGGATGCAATCGTTTTTATGGATTTTAAAATGCATTATAGTGTAGAGTAAAATGAGTTATCAGTAGAAGTGATGGAA
TTAATTACCAAAAGGGATGC

Downstream 100 bases:

>100_bases
GGCATGCCTTTCGCGCCGTTGTTCGCAGATTCAAAATATAATTTGATCGAAGTGATGCCGAACGTTGACAATGCTCAATA
GTTATGGAAAATTTCCAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MMRTENKGRRNECGFTLIELMIVIAILGVLATIAVPRFLVYRQSACDSQAKTDARNFYTASMSDAIDSSGDKTFNSTNPP
PSYRGLSPVSGSFVFMAATHTATCDAAFKHPQGSKTFTLNSEGRITAFP

Sequences:

>Translated_129_residues
MMRTENKGRRNECGFTLIELMIVIAILGVLATIAVPRFLVYRQSACDSQAKTDARNFYTASMSDAIDSSGDKTFNSTNPP
PSYRGLSPVSGSFVFMAATHTATCDAAFKHPQGSKTFTLNSEGRITAFP
>Mature_129_residues
MMRTENKGRRNECGFTLIELMIVIAILGVLATIAVPRFLVYRQSACDSQAKTDARNFYTASMSDAIDSSGDKTFNSTNPP
PSYRGLSPVSGSFVFMAATHTATCDAAFKHPQGSKTFTLNSEGRITAFP

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13995; Mature: 13995

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRTENKGRRNECGFTLIELMIVIAILGVLATIAVPRFLVYRQSACDSQAKTDARNFYTA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEEC
SMSDAIDSSGDKTFNSTNPPPSYRGLSPVSGSFVFMAATHTATCDAAFKHPQGSKTFTLN
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCEEEEC
SEGRITAFP
CCCCEEECC
>Mature Secondary Structure
MMRTENKGRRNECGFTLIELMIVIAILGVLATIAVPRFLVYRQSACDSQAKTDARNFYTA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEEC
SMSDAIDSSGDKTFNSTNPPPSYRGLSPVSGSFVFMAATHTATCDAAFKHPQGSKTFTLN
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCEEEEC
SEGRITAFP
CCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA