| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859353
Identifier: 85859353
GI number: 85859353
Start: 1549329
End: 1549730
Strand: Direct
Name: 85859353
Synonym: SYN_03140
Alternate gene names: NA
Gene position: 1549329-1549730 (Clockwise)
Preceding gene: 85859352
Following gene: 85859354
Centisome position: 48.73
GC content: 59.2
Gene sequence:
>402_bases ATGAAATTGATTATGCTTGTTATTGCGATTCTCTCGTTGACAGGGTGCGCCACCGGCCCCGTCCTTTATCCCAATGCTCA CCTTCAGATGGTCGGCGAGGTGCAGGCCCGTAAGGATATAGCAGAATGTGAGGTCCTTGCCGATCAGTACGTCAAATCAG ATGCAGGAATTGCCGCGGCCAGAAGCACCGCCATTGGCGGAGCCGGAGGGGCAGTCATCGGCGGCGCCGCAGGCGCCGTG ACGGGCAACCTGGGTCGGGGCATTGGTGTCGGCGCAGCCGCCGGCGCGGCGACGGGTCTGGTGCACGGCATCATCCGCGC GTCGGAACCCAGTCCCATTTTCAAAAACTTCATGATCCGATGCCTGCAGGAAAAAGGATATGACGTCATCGGATGGGAAT GA
Upstream 100 bases:
>100_bases AAAGGCTCAAGGCTTGTGGGCATTGTGACATGAAATAATGCGATCCAGTTGCAGGAGTTACGGAAAAAAATAGACAGACA TCCTCTGAGGAGAAACCAAA
Downstream 100 bases:
>100_bases CGGCCTGATCCGCTTTTCTCATCGCAGATGACGGCTGACGTCGATATGGGAGACTCGTTCAGCAGTCGAAAAAGCCAATA ATTCAAGAAGGAGGATATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKLIMLVIAILSLTGCATGPVLYPNAHLQMVGEVQARKDIAECEVLADQYVKSDAGIAAARSTAIGGAGGAVIGGAAGAV TGNLGRGIGVGAAAGAATGLVHGIIRASEPSPIFKNFMIRCLQEKGYDVIGWE
Sequences:
>Translated_133_residues MKLIMLVIAILSLTGCATGPVLYPNAHLQMVGEVQARKDIAECEVLADQYVKSDAGIAAARSTAIGGAGGAVIGGAAGAV TGNLGRGIGVGAAAGAATGLVHGIIRASEPSPIFKNFMIRCLQEKGYDVIGWE >Mature_133_residues MKLIMLVIAILSLTGCATGPVLYPNAHLQMVGEVQARKDIAECEVLADQYVKSDAGIAAARSTAIGGAGGAVIGGAAGAV TGNLGRGIGVGAAAGAATGLVHGIIRASEPSPIFKNFMIRCLQEKGYDVIGWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13393; Mature: 13393
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIMLVIAILSLTGCATGPVLYPNAHLQMVGEVQARKDIAECEVLADQYVKSDAGIAAA CHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RSTAIGGAGGAVIGGAAGAVTGNLGRGIGVGAAAGAATGLVHGIIRASEPSPIFKNFMIR HHCCCCCCCCCEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH CLQEKGYDVIGWE HHHHCCCEECCCC >Mature Secondary Structure MKLIMLVIAILSLTGCATGPVLYPNAHLQMVGEVQARKDIAECEVLADQYVKSDAGIAAA CHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RSTAIGGAGGAVIGGAAGAVTGNLGRGIGVGAAAGAATGLVHGIIRASEPSPIFKNFMIR HHCCCCCCCCCEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH CLQEKGYDVIGWE HHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA