| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is folK [H]
Identifier: 85859280
GI number: 85859280
Start: 1467572
End: 1468102
Strand: Direct
Name: folK [H]
Synonym: SYN_02163
Alternate gene names: 85859280
Gene position: 1467572-1468102 (Clockwise)
Preceding gene: 85859279
Following gene: 85859281
Centisome position: 46.16
GC content: 50.09
Gene sequence:
>531_bases GTGGATAAAGCAGGGAATCCTTTGTGTGAAGAAGTTTTGGGGGTCATTGCCTATATCGGCATCGGATCGAATCTTGGGCA GCCCTTGGAACAGTGTCTCGAAGCCATTAAGTGTCTTTCGTCTGTCAACGCCATTACGCTCCTGCGTTGTTCCTCTCTTT ACAGGACTGAACCGATAGGGTTGAAAAATCAGCCCTGGTTTGTTAATGCCGTTGCTGAAATACGTACATCTCTTTCACCG CGAGCGCTTTTGCGAATCCTCATGCAGATTGAGGAAGCTATGGGGAGAGTTCGGGAAGCGCATTGGGGTCCACGGATCAT TGATCTGGATATTCTCCTGTTCGGGCAGGAGATCGTTCAGGAGCAGGATCTGAAGATTCCTCATCCCGAACTGCATAAAA GGCGTTTTGTCCTTATCCCGCTGAGCGAACTGGCCTCCTATGCGATTCATCCGGCTTTCGGGGTATCGATTCGTGGACTC ATGGAGAGGCTTGAGGACGACAGCCGGGTTGAACGCATTGAATATGGTTAA
Upstream 100 bases:
>100_bases TGGGTGGTCAGGCAGGAACCGGGACTCTATGATATGCAGGATGTCCTCGGGTTCCGATCCTGAAAAAGAACTTTGTATAT CAGACCATGGTCAGTGAGCT
Downstream 100 bases:
>100_bases ATGAGCATGATTCTTCGGTTTATTTTTACAGTTATTGTTCTTTATCTGATTTTTCGGGTGTTAAAGAGAATTCTGCGTTC TGCGGAAAAGAAGAAAAATG
Product: 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDKAGNPLCEEVLGVIAYIGIGSNLGQPLEQCLEAIKCLSSVNAITLLRCSSLYRTEPIGLKNQPWFVNAVAEIRTSLSP RALLRILMQIEEAMGRVREAHWGPRIIDLDILLFGQEIVQEQDLKIPHPELHKRRFVLIPLSELASYAIHPAFGVSIRGL MERLEDDSRVERIEYG
Sequences:
>Translated_176_residues MDKAGNPLCEEVLGVIAYIGIGSNLGQPLEQCLEAIKCLSSVNAITLLRCSSLYRTEPIGLKNQPWFVNAVAEIRTSLSP RALLRILMQIEEAMGRVREAHWGPRIIDLDILLFGQEIVQEQDLKIPHPELHKRRFVLIPLSELASYAIHPAFGVSIRGL MERLEDDSRVERIEYG >Mature_176_residues MDKAGNPLCEEVLGVIAYIGIGSNLGQPLEQCLEAIKCLSSVNAITLLRCSSLYRTEPIGLKNQPWFVNAVAEIRTSLSP RALLRILMQIEEAMGRVREAHWGPRIIDLDILLFGQEIVQEQDLKIPHPELHKRRFVLIPLSELASYAIHPAFGVSIRGL MERLEDDSRVERIEYG
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=138, Percent_Identity=45.6521739130435, Blast_Score=127, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6324073, Length=162, Percent_Identity=38.2716049382716, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 19812; Mature: 19812
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00794 HPPK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKAGNPLCEEVLGVIAYIGIGSNLGQPLEQCLEAIKCLSSVNAITLLRCSSLYRTEPIG CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC LKNQPWFVNAVAEIRTSLSPRALLRILMQIEEAMGRVREAHWGPRIIDLDILLFGQEIVQ CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH EQDLKIPHPELHKRRFVLIPLSELASYAIHPAFGVSIRGLMERLEDDSRVERIEYG HCCCCCCCHHHHCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure MDKAGNPLCEEVLGVIAYIGIGSNLGQPLEQCLEAIKCLSSVNAITLLRCSSLYRTEPIG CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC LKNQPWFVNAVAEIRTSLSPRALLRILMQIEEAMGRVREAHWGPRIIDLDILLFGQEIVQ CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH EQDLKIPHPELHKRRFVLIPLSELASYAIHPAFGVSIRGLMERLEDDSRVERIEYG HCCCCCCCHHHHCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10080886 [H]