| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859281
Identifier: 85859281
GI number: 85859281
Start: 1468103
End: 1468384
Strand: Direct
Name: 85859281
Synonym: SYN_02164
Alternate gene names: NA
Gene position: 1468103-1468384 (Clockwise)
Preceding gene: 85859280
Following gene: 85859282
Centisome position: 46.18
GC content: 39.72
Gene sequence:
>282_bases ATGAGCATGATTCTTCGGTTTATTTTTACAGTTATTGTTCTTTATCTGATTTTTCGGGTGTTAAAGAGAATTCTGCGTTC TGCGGAAAAGAAGAAAAATGAACCCCTCTCTAATGCCTGTTCCCGTACGATTCAAGGAGGCGATCTCGTTCAGGATCCAT GTTGTTTGACCTACATACCTGAGGGAGAAGCTTATAAGGCATCGATTGGAGGAGAAATACTATATTTTTGCAGTGAAGCC TGTTTTAAAAAATATCAGATGGAGCGGAAGGAGAAATCCTGA
Upstream 100 bases:
>100_bases GGCCTCCTATGCGATTCATCCGGCTTTCGGGGTATCGATTCGTGGACTCATGGAGAGGCTTGAGGACGACAGCCGGGTTG AACGCATTGAATATGGTTAA
Downstream 100 bases:
>100_bases AAGGAAAGGGTATGAAGTTTTTTATTGATACGGCCAACATCCGTGAAATTGAAGAAGGACTGCGTTTAGGAATGGTGGAC GGCGTGACGACCAACCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSMILRFIFTVIVLYLIFRVLKRILRSAEKKKNEPLSNACSRTIQGGDLVQDPCCLTYIPEGEAYKASIGGEILYFCSEA CFKKYQMERKEKS
Sequences:
>Translated_93_residues MSMILRFIFTVIVLYLIFRVLKRILRSAEKKKNEPLSNACSRTIQGGDLVQDPCCLTYIPEGEAYKASIGGEILYFCSEA CFKKYQMERKEKS >Mature_92_residues SMILRFIFTVIVLYLIFRVLKRILRSAEKKKNEPLSNACSRTIQGGDLVQDPCCLTYIPEGEAYKASIGGEILYFCSEAC FKKYQMERKEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10724; Mature: 10593
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMILRFIFTVIVLYLIFRVLKRILRSAEKKKNEPLSNACSRTIQGGDLVQDPCCLTYIP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEECC EGEAYKASIGGEILYFCSEACFKKYQMERKEKS CCCCEEHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SMILRFIFTVIVLYLIFRVLKRILRSAEKKKNEPLSNACSRTIQGGDLVQDPCCLTYIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEECC EGEAYKASIGGEILYFCSEACFKKYQMERKEKS CCCCEEHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA