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The map label for this gene is flgH [H]

Identifier: 85859198

GI number: 85859198

Start: 1372304

End: 1373020

Strand: Direct

Name: flgH [H]

Synonym: SYN_02817

Alternate gene names: 85859198

Gene position: 1372304-1373020 (Clockwise)

Preceding gene: 85859197

Following gene: 85859199

Centisome position: 43.16

GC content: 43.1

Gene sequence:

>717_bases
GTGATGAAAGAAAAGGACATGAACATTTTAATTCAAAATAGATTGATTTTTTTGTTCCTGATTTTATGGCTTTGGACGGG
TTGTGCAACAAAACCGGATTTTACAGCCGGTGAACAGCCGTTAGATTTGACGGTTCGACCCGAAGCACTTCCCGTAAGGG
GATCCATCTGGCCGGGTGAGAGTGCATCAAACATGCTGTTTGCGGATAAAAAAGCAAGATATATCAATGATATTGTGACC
ATTCTTATTAATGAAGCTTCACAGGGAGGCAATAAGGCAACAACCAATACAAGCCGGGATTCCGACTCTGCCGCAGGTAT
TGATGCCTTTTGGGGACTTGATCAATCGATTTTGAGTCGGAATGTGAATATGGGATCGAAAATAAAGATTGGGGGATCCT
CTTCTTCAACCCTAAAAGGAACGGGGAATACCACACGGGGCGGTCAGCTTAAAGGCACAGTTACGGCTCGGGTTGTCAGA
GTGCTTGATAACGGAAATCTCGTTATTGAAGGTAGACGGCAACTGACCATAAATGAAGAAGATCAGTATCTTATTATTTC
AGGTATTATCAGGCCTGAAGATATTACTACGGAAAATTGCATCTTTTCACAATACATCGCCGACGCAAGAATTGTCTATG
CGGGCAAGGGAATTATCAATGACAAAATGAGGCCTGGTTGGGCTACAAGAATAGTCGACTGGGTGTGGCCTTTTTAA

Upstream 100 bases:

>100_bases
AGTCATTGGAAACTCAGTTGTCAAAGTCGAAATATAAAAACAGATGTGATGGATTTGGTCGGGTATGATGAAATCAAGGA
TGAATGATTGCTGATATTTT

Downstream 100 bases:

>100_bases
GGAAATGACCGGAAGAGAGTTTAAATGTCAATATTTAAATTAGGGAAATTTATGAAATATGGAATGCTGCTTAAAAAAAT
ATTTCTGACAGGGATAATTG

Product: flagellar L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MMKEKDMNILIQNRLIFLFLILWLWTGCATKPDFTAGEQPLDLTVRPEALPVRGSIWPGESASNMLFADKKARYINDIVT
ILINEASQGGNKATTNTSRDSDSAAGIDAFWGLDQSILSRNVNMGSKIKIGGSSSSTLKGTGNTTRGGQLKGTVTARVVR
VLDNGNLVIEGRRQLTINEEDQYLIISGIIRPEDITTENCIFSQYIADARIVYAGKGIINDKMRPGWATRIVDWVWPF

Sequences:

>Translated_238_residues
MMKEKDMNILIQNRLIFLFLILWLWTGCATKPDFTAGEQPLDLTVRPEALPVRGSIWPGESASNMLFADKKARYINDIVT
ILINEASQGGNKATTNTSRDSDSAAGIDAFWGLDQSILSRNVNMGSKIKIGGSSSSTLKGTGNTTRGGQLKGTVTARVVR
VLDNGNLVIEGRRQLTINEEDQYLIISGIIRPEDITTENCIFSQYIADARIVYAGKGIINDKMRPGWATRIVDWVWPF
>Mature_238_residues
MMKEKDMNILIQNRLIFLFLILWLWTGCATKPDFTAGEQPLDLTVRPEALPVRGSIWPGESASNMLFADKKARYINDIVT
ILINEASQGGNKATTNTSRDSDSAAGIDAFWGLDQSILSRNVNMGSKIKIGGSSSSTLKGTGNTTRGGQLKGTVTARVVR
VLDNGNLVIEGRRQLTINEEDQYLIISGIIRPEDITTENCIFSQYIADARIVYAGKGIINDKMRPGWATRIVDWVWPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=217, Percent_Identity=30.4147465437788, Blast_Score=94, Evalue=7e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 26297; Mature: 26297

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKEKDMNILIQNRLIFLFLILWLWTGCATKPDFTAGEQPLDLTVRPEALPVRGSIWPGE
CCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCC
SASNMLFADKKARYINDIVTILINEASQGGNKATTNTSRDSDSAAGIDAFWGLDQSILSR
CCCCEEEECHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHC
NVNMGSKIKIGGSSSSTLKGTGNTTRGGQLKGTVTARVVRVLDNGNLVIEGRRQLTINEE
CCCCCCEEEECCCCCCEEECCCCCCCCCEEEHHHHEEEEEEECCCCEEEECCEEEEECCC
DQYLIISGIIRPEDITTENCIFSQYIADARIVYAGKGIINDKMRPGWATRIVDWVWPF
CCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEECCCEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MMKEKDMNILIQNRLIFLFLILWLWTGCATKPDFTAGEQPLDLTVRPEALPVRGSIWPGE
CCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCC
SASNMLFADKKARYINDIVTILINEASQGGNKATTNTSRDSDSAAGIDAFWGLDQSILSR
CCCCEEEECHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHC
NVNMGSKIKIGGSSSSTLKGTGNTTRGGQLKGTVTARVVRVLDNGNLVIEGRRQLTINEE
CCCCCCEEEECCCCCCEEECCCCCCCCCEEEHHHHEEEEEEECCCCEEEECCEEEEECCC
DQYLIISGIIRPEDITTENCIFSQYIADARIVYAGKGIINDKMRPGWATRIVDWVWPF
CCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEECCCEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA