| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is flgI
Identifier: 85859199
GI number: 85859199
Start: 1373045
End: 1374256
Strand: Direct
Name: flgI
Synonym: SYN_02816
Alternate gene names: 85859199
Gene position: 1373045-1374256 (Clockwise)
Preceding gene: 85859198
Following gene: 85859200
Centisome position: 43.19
GC content: 43.89
Gene sequence:
>1212_bases ATGTCAATATTTAAATTAGGGAAATTTATGAAATATGGAATGCTGCTTAAAAAAATATTTCTGACAGGGATAATTGTTTT AGACCTTGTTTTTTTTGTTTCATACGGTTTTGCAGCAAGATTGAAAGATATTGCGTCTATCAGCGGGGTGAGAGAAAATC AGCTTATAGGCTATGGTTTGGTTGTCGGCTTAGCCGGTACGGGTGATGACGTCAAAAACGGTTTTACAAGCGAATCCCTA TCCAACCTGCTGAACAGACAGGGCATATCCATGAAGAATAAAACGTTGAAAGCCGATAACATTGCCGCTGTTATGGTTAC CTCATCATTGCCTGCATTCGCCAAAATAGGAGCGAGGATAGACGCTACGGTTTCATCTATTGGTGATGCGAAAAGCCTGC ATGGTGGAACCCTTCTCATGACACCTCTAAGAGGTGTAGATGGAGAAATTTATGCCGTTGCCCAGGGTCCTGTTACCTTG GGCGGATACGCCGTGGGAGGGGCGAACAGCAGTACAGGGAAAAATCATGCAAGTGCTGGTCGTGTTTCAAGTGGGGTGTT GGTTGAGCGGGAATTAAAATATGATTTTGACCGACTCCGTTCCTTCACGCTTAATCTTTTACAACCTGATTTTACGACTT CGGCCTGTTTAGCCGATGTGATGAACAAAACACTTGGACAACACGTTGAGGCAAAACAGGTTGATTCCTTTTCCGTTGAT GTTCGAATGAAAGAAGCTACCGGAGGGAATTTGATGAACATCATTTCCATGATGGAAAATCTCGATGTTCCTGTCGATTC CAAGTCCGTTGTGGTCATGAATGAAAAAACAGGAACGGTCGTTATGGGTGAAAATGTCCGGATTTCAACTGTCGCTGTAG CCCATGGAAATTTAAGCATACAGATCAAAGAAGACATTCGGGTTTCTCAACCTCTTCCTTTTTCGCCACTGTCGTCTAAG GGAAATCAGCCTGCTATGGATAAAAAAACAGGGACAATTGTTGCGCCTGGAGGTCAGACGGTTGTGACTCTAGATACCAC GGTGGGTATCGAAGAGGAGAAAAAACAAGTGATGGTTATCTCAAAGGGGGTGACCATTCAGGAAGTTGTAAAGGCATTGA ATGCCTTGGGCGTGTCGCCTCGCGATCTTATTACTATCATGCAGACCATAAAAGCAGCCGGCGCCCTGCAGGCAGAATTA AAAATTATATAA
Upstream 100 bases:
>100_bases GGGCAAGGGAATTATCAATGACAAAATGAGGCCTGGTTGGGCTACAAGAATAGTCGACTGGGTGTGGCCTTTTTAAGGAA ATGACCGGAAGAGAGTTTAA
Downstream 100 bases:
>100_bases GATACTGTTAAACAATTGAAGAATTGAAAGGTTCGAAAATGAGCGGTGATAAAGTGACAGCCACAGGTGGAACGGGTACG CGCGATGCTGCAATCCGAAA
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSIFKLGKFMKYGMLLKKIFLTGIIVLDLVFFVSYGFAARLKDIASISGVRENQLIGYGLVVGLAGTGDDVKNGFTSESL SNLLNRQGISMKNKTLKADNIAAVMVTSSLPAFAKIGARIDATVSSIGDAKSLHGGTLLMTPLRGVDGEIYAVAQGPVTL GGYAVGGANSSTGKNHASAGRVSSGVLVERELKYDFDRLRSFTLNLLQPDFTTSACLADVMNKTLGQHVEAKQVDSFSVD VRMKEATGGNLMNIISMMENLDVPVDSKSVVVMNEKTGTVVMGENVRISTVAVAHGNLSIQIKEDIRVSQPLPFSPLSSK GNQPAMDKKTGTIVAPGGQTVVTLDTTVGIEEEKKQVMVISKGVTIQEVVKALNALGVSPRDLITIMQTIKAAGALQAEL KII
Sequences:
>Translated_403_residues MSIFKLGKFMKYGMLLKKIFLTGIIVLDLVFFVSYGFAARLKDIASISGVRENQLIGYGLVVGLAGTGDDVKNGFTSESL SNLLNRQGISMKNKTLKADNIAAVMVTSSLPAFAKIGARIDATVSSIGDAKSLHGGTLLMTPLRGVDGEIYAVAQGPVTL GGYAVGGANSSTGKNHASAGRVSSGVLVERELKYDFDRLRSFTLNLLQPDFTTSACLADVMNKTLGQHVEAKQVDSFSVD VRMKEATGGNLMNIISMMENLDVPVDSKSVVVMNEKTGTVVMGENVRISTVAVAHGNLSIQIKEDIRVSQPLPFSPLSSK GNQPAMDKKTGTIVAPGGQTVVTLDTTVGIEEEKKQVMVISKGVTIQEVVKALNALGVSPRDLITIMQTIKAAGALQAEL KII >Mature_402_residues SIFKLGKFMKYGMLLKKIFLTGIIVLDLVFFVSYGFAARLKDIASISGVRENQLIGYGLVVGLAGTGDDVKNGFTSESLS NLLNRQGISMKNKTLKADNIAAVMVTSSLPAFAKIGARIDATVSSIGDAKSLHGGTLLMTPLRGVDGEIYAVAQGPVTLG GYAVGGANSSTGKNHASAGRVSSGVLVERELKYDFDRLRSFTLNLLQPDFTTSACLADVMNKTLGQHVEAKQVDSFSVDV RMKEATGGNLMNIISMMENLDVPVDSKSVVVMNEKTGTVVMGENVRISTVAVAHGNLSIQIKEDIRVSQPLPFSPLSSKG NQPAMDKKTGTIVAPGGQTVVTLDTTVGIEEEKKQVMVISKGVTIQEVVKALNALGVSPRDLITIMQTIKAAGALQAELK II
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=390, Percent_Identity=39.2307692307692, Blast_Score=243, Evalue=2e-65,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 42697; Mature: 42566
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFKLGKFMKYGMLLKKIFLTGIIVLDLVFFVSYGFAARLKDIASISGVRENQLIGYGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEE VVGLAGTGDDVKNGFTSESLSNLLNRQGISMKNKTLKADNIAAVMVTSSLPAFAKIGARI EEEECCCCCHHHCCCCHHHHHHHHHHCCCCCCCCEECCCCEEEEEEECCCCHHHHHCCHH DATVSSIGDAKSLHGGTLLMTPLRGVDGEIYAVAQGPVTLGGYAVGGANSSTGKNHASAG HHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCEEECCEEECCCCCCCCCCCCCCC RVSSGVLVERELKYDFDRLRSFTLNLLQPDFTTSACLADVMNKTLGQHVEAKQVDSFSVD CCCCCEEEEEHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCEEEE VRMKEATGGNLMNIISMMENLDVPVDSKSVVVMNEKTGTVVMGENVRISTVAVAHGNLSI EEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCEEEEEEEEEECCEEE QIKEDIRVSQPLPFSPLSSKGNQPAMDKKTGTIVAPGGQTVVTLDTTVGIEEEKKQVMVI EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCEEEEE SKGVTIQEVVKALNALGVSPRDLITIMQTIKAAGALQAELKII ECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure SIFKLGKFMKYGMLLKKIFLTGIIVLDLVFFVSYGFAARLKDIASISGVRENQLIGYGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEE VVGLAGTGDDVKNGFTSESLSNLLNRQGISMKNKTLKADNIAAVMVTSSLPAFAKIGARI EEEECCCCCHHHCCCCHHHHHHHHHHCCCCCCCCEECCCCEEEEEEECCCCHHHHHCCHH DATVSSIGDAKSLHGGTLLMTPLRGVDGEIYAVAQGPVTLGGYAVGGANSSTGKNHASAG HHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCEEECCEEECCCCCCCCCCCCCCC RVSSGVLVERELKYDFDRLRSFTLNLLQPDFTTSACLADVMNKTLGQHVEAKQVDSFSVD CCCCCEEEEEHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCEEEE VRMKEATGGNLMNIISMMENLDVPVDSKSVVVMNEKTGTVVMGENVRISTVAVAHGNLSI EEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCEEEEEEEEEECCEEE QIKEDIRVSQPLPFSPLSSKGNQPAMDKKTGTIVAPGGQTVVTLDTTVGIEEEKKQVMVI EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCEEEEE SKGVTIQEVVKALNALGVSPRDLITIMQTIKAAGALQAELKII ECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA