Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859197

Identifier: 85859197

GI number: 85859197

Start: 1371506

End: 1372240

Strand: Direct

Name: 85859197

Synonym: SYN_02818

Alternate gene names: NA

Gene position: 1371506-1372240 (Clockwise)

Preceding gene: 85859196

Following gene: 85859198

Centisome position: 43.14

GC content: 41.09

Gene sequence:

>735_bases
ATGGCAAAGTCAAGTGGGATTTCAATTTTGGTATTTCTCGCGTGTTGTTTTATTTACGCGGGTGTATCGGGTAAAGAACT
GCTTGCGTTCGAAGGAAGAACACTTAATGAATCTTTGATTAAAGCCGCCATTGTCGATCATGTCGAAAAACACATGACTT
GGCCCAAGGGGTCGATAAGAATAACGTTTCCCAATGGAGTTCCTGAAGTTACCCTTTCTCGGGAAGATTTCACTCTACAT
GTGAAAGAGAACAAAAGCGACGAATATATCGGCAACAGATTATATCAGGTTAAAATCCGTCAGCGAAATAATTTTCTTAA
ACATATTTCCGTTCCGACACGGATTGAGGTTTGCAGGGATGTCGCATTGAGTGCTCGTCCCTTAGAACGGAACAGAAACA
TCTCAGAACATGATATCCTTATCGTAAAAAAGTGGTTCAGCCGATTGCCTCAGGATCTCCTTGCTGATCCGGAGCGGATT
ATAGGTAAAAGACTTCTTCGTTCGATAAAGGAGCGGTCTACATTTACGGCGAGTATGCTTCGCGAACCTATCCTGTTCAA
AAAAGGTAAGGTTGTTAAAGTCATATGTGATAACGGTGTATTAAGCATAACAACGTTGGGGCTGGCTGAAGAGGAAGGAA
CCTTAGGAGCCACGGTAAAAATCAAAAATATTTCTTCCAATAAAATAATCCACGCAAAAGTCATTGGAAACTCAGTTGTC
AAAGTCGAAATATAA

Upstream 100 bases:

>100_bases
AAAATGATTGTTGGTCAGCGGGCGTATGAAATCAATTCGAAATCAATCGTGACAGCAGACAATATGCTGTCGATGATTAA
TAATTTGAAGAAATAAGCCA

Downstream 100 bases:

>100_bases
AAACAGATGTGATGGATTTGGTCGGGTATGATGAAATCAAGGATGAATGATTGCTGATATTTTGTGATGAAAGAAAAGGA
CATGAACATTTTAATTCAAA

Product: flagellar basal body P-ring biosynthesis protein

Products: NA

Alternate protein names: Flagellar Basal Body P-Ring Biosynthesis Protein; SAF Domain-Containing Protein

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MAKSSGISILVFLACCFIYAGVSGKELLAFEGRTLNESLIKAAIVDHVEKHMTWPKGSIRITFPNGVPEVTLSREDFTLH
VKENKSDEYIGNRLYQVKIRQRNNFLKHISVPTRIEVCRDVALSARPLERNRNISEHDILIVKKWFSRLPQDLLADPERI
IGKRLLRSIKERSTFTASMLREPILFKKGKVVKVICDNGVLSITTLGLAEEEGTLGATVKIKNISSNKIIHAKVIGNSVV
KVEI

Sequences:

>Translated_244_residues
MAKSSGISILVFLACCFIYAGVSGKELLAFEGRTLNESLIKAAIVDHVEKHMTWPKGSIRITFPNGVPEVTLSREDFTLH
VKENKSDEYIGNRLYQVKIRQRNNFLKHISVPTRIEVCRDVALSARPLERNRNISEHDILIVKKWFSRLPQDLLADPERI
IGKRLLRSIKERSTFTASMLREPILFKKGKVVKVICDNGVLSITTLGLAEEEGTLGATVKIKNISSNKIIHAKVIGNSVV
KVEI
>Mature_243_residues
AKSSGISILVFLACCFIYAGVSGKELLAFEGRTLNESLIKAAIVDHVEKHMTWPKGSIRITFPNGVPEVTLSREDFTLHV
KENKSDEYIGNRLYQVKIRQRNNFLKHISVPTRIEVCRDVALSARPLERNRNISEHDILIVKKWFSRLPQDLLADPERII
GKRLLRSIKERSTFTASMLREPILFKKGKVVKVICDNGVLSITTLGLAEEEGTLGATVKIKNISSNKIIHAKVIGNSVVK
VEI

Specific function: Unknown

COG id: COG1261

COG function: function code NO; Flagellar basal body P-ring biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27415; Mature: 27283

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSSGISILVFLACCFIYAGVSGKELLAFEGRTLNESLIKAAIVDHVEKHMTWPKGSIR
CCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEE
ITFPNGVPEVTLSREDFTLHVKENKSDEYIGNRLYQVKIRQRNNFLKHISVPTRIEVCRD
EECCCCCCCEEECCCCEEEEEECCCCCHHHCCEEEEEEEECCCCHHHHCCCCHHHHHHHH
VALSARPLERNRNISEHDILIVKKWFSRLPQDLLADPERIIGKRLLRSIKERSTFTASML
HHCCCCCCHHCCCCCHHHEEHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
REPILFKKGKVVKVICDNGVLSITTLGLAEEEGTLGATVKIKNISSNKIIHAKVIGNSVV
HCCCEECCCCEEEEEECCCEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCEEE
KVEI
EEEC
>Mature Secondary Structure 
AKSSGISILVFLACCFIYAGVSGKELLAFEGRTLNESLIKAAIVDHVEKHMTWPKGSIR
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEE
ITFPNGVPEVTLSREDFTLHVKENKSDEYIGNRLYQVKIRQRNNFLKHISVPTRIEVCRD
EECCCCCCCEEECCCCEEEEEECCCCCHHHCCEEEEEEEECCCCHHHHCCCCHHHHHHHH
VALSARPLERNRNISEHDILIVKKWFSRLPQDLLADPERIIGKRLLRSIKERSTFTASML
HHCCCCCCHHCCCCCHHHEEHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
REPILFKKGKVVKVICDNGVLSITTLGLAEEEGTLGATVKIKNISSNKIIHAKVIGNSVV
HCCCEECCCCEEEEEECCCEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCEEE
KVEI
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA