Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859193

Identifier: 85859193

GI number: 85859193

Start: 1368000

End: 1369175

Strand: Direct

Name: 85859193

Synonym: SYN_02822

Alternate gene names: NA

Gene position: 1368000-1369175 (Clockwise)

Preceding gene: 85859192

Following gene: 85859194

Centisome position: 43.03

GC content: 38.95

Gene sequence:

>1176_bases
ATGATAACGTCGCATACAATGGAAATATCGCCTAATGTCCCAACTGCATTTTCCAATCCTGTTCAGGTTATCAAAAATCC
TGCCGATATCTCATCCTTCCGCCTCGGGGATGTGGTGCAGGCACTGGTTCTGGAGAAGCTGAGCAGTAAAGAAGTGCTGC
TCGCTGTAAAGGAATCTGAAATTGCTGCTCAATCAGCTCTTCCATTGAACGTGGGAGATCGTCTGCTTCTTCAGGTTGCA
AAAACTCACCCCATGATAGTTCTTAAACTCATCATTCCGGATGATTCGGAAACGCTTGAATTTCGAAATAATTTAGTCCT
GTTTCGGTCATTCCCCGAAGGGTTGTTTAATGTGGTGAAAAATGGTCTTGAGATATTTCAGGGGAATATACAACCAGTTT
ATCAATTTCTCAATCAAGCGGACATCGATGCCTTTCTTAAAATTCTCAATACTCTCATTTATTCTGAGAAAAGCCTGACG
AGCCCTCTTTTTTTAAAAGAGTTTATTATGAATATCGGTTACTTGATGGAAAAAAACCTCAAGAAGTCTCTTGATCGGAC
ACATGAAAAAGGAAATGACTTAAAGAAAGGGGTGGACAAAAATATTAAAAGCATTTTAGCCAGGCTTTCCTGCCAACTCC
ATCAGATTATGGATAACGCTATGGATTCGGATTTAGATCCCATGCTGTTGAAATCATTGAAGAGCCTGTCGGATTATACG
GCTGATTCATTGAAAATGATTTATAATCAGCAAGTTGTAAATGTGTTCAGCCAGGAAGAGCAGCAGGGATATTATTTCCA
GCTTCCGATTAAGTTCGCTGACAACCTGAGGATGGTGGATCTCTTTATCAGGTTGAACAACGCTAATAAGAAAAAAACGG
GAATGGTTAAACAATTTCAATTTGTTTTGTTTTTTAATATGGATCCATTGGGAGATCTTATTGTGGACGTCAGATATATG
AATAAAAAAATATGGGGACTTTTTAAATGTGACCGATCCGAATCACGTGATTTTCTTTCTGATTTTATAGAGACCTTGAA
TGAACGCCTTATTTTGTCGGGATATGGCCCAAATTCTTTCAACATCCAACTTTCCAGGGATCTTTCGAGAGAAAGGTCTG
ACTATTTGAAAGATACCGTGATCTATTCAAAAAAGATCGTTAACTGCTTTGCCTGA

Upstream 100 bases:

>100_bases
TGGCCCGGCAAGGTCTGGATGAAGAACAAATCGCTCATCAATCAGGACTGCCCGAAGGTGAAGTTGATCTGATTCTCAAC
CTCGCCCGAGAGAAAAGTTC

Downstream 100 bases:

>100_bases
ATTGGCTGATGTGGCTGTGTTGAGGGAATGACATTCAAAACGATGAATTTAAGATAGTCGTGTGAAGAAGAACGGAGTAG
AAGAGTAAAATGAAAAAAGT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MITSHTMEISPNVPTAFSNPVQVIKNPADISSFRLGDVVQALVLEKLSSKEVLLAVKESEIAAQSALPLNVGDRLLLQVA
KTHPMIVLKLIIPDDSETLEFRNNLVLFRSFPEGLFNVVKNGLEIFQGNIQPVYQFLNQADIDAFLKILNTLIYSEKSLT
SPLFLKEFIMNIGYLMEKNLKKSLDRTHEKGNDLKKGVDKNIKSILARLSCQLHQIMDNAMDSDLDPMLLKSLKSLSDYT
ADSLKMIYNQQVVNVFSQEEQQGYYFQLPIKFADNLRMVDLFIRLNNANKKKTGMVKQFQFVLFFNMDPLGDLIVDVRYM
NKKIWGLFKCDRSESRDFLSDFIETLNERLILSGYGPNSFNIQLSRDLSRERSDYLKDTVIYSKKIVNCFA

Sequences:

>Translated_391_residues
MITSHTMEISPNVPTAFSNPVQVIKNPADISSFRLGDVVQALVLEKLSSKEVLLAVKESEIAAQSALPLNVGDRLLLQVA
KTHPMIVLKLIIPDDSETLEFRNNLVLFRSFPEGLFNVVKNGLEIFQGNIQPVYQFLNQADIDAFLKILNTLIYSEKSLT
SPLFLKEFIMNIGYLMEKNLKKSLDRTHEKGNDLKKGVDKNIKSILARLSCQLHQIMDNAMDSDLDPMLLKSLKSLSDYT
ADSLKMIYNQQVVNVFSQEEQQGYYFQLPIKFADNLRMVDLFIRLNNANKKKTGMVKQFQFVLFFNMDPLGDLIVDVRYM
NKKIWGLFKCDRSESRDFLSDFIETLNERLILSGYGPNSFNIQLSRDLSRERSDYLKDTVIYSKKIVNCFA
>Mature_391_residues
MITSHTMEISPNVPTAFSNPVQVIKNPADISSFRLGDVVQALVLEKLSSKEVLLAVKESEIAAQSALPLNVGDRLLLQVA
KTHPMIVLKLIIPDDSETLEFRNNLVLFRSFPEGLFNVVKNGLEIFQGNIQPVYQFLNQADIDAFLKILNTLIYSEKSLT
SPLFLKEFIMNIGYLMEKNLKKSLDRTHEKGNDLKKGVDKNIKSILARLSCQLHQIMDNAMDSDLDPMLLKSLKSLSDYT
ADSLKMIYNQQVVNVFSQEEQQGYYFQLPIKFADNLRMVDLFIRLNNANKKKTGMVKQFQFVLFFNMDPLGDLIVDVRYM
NKKIWGLFKCDRSESRDFLSDFIETLNERLILSGYGPNSFNIQLSRDLSRERSDYLKDTVIYSKKIVNCFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44769; Mature: 44769

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITSHTMEISPNVPTAFSNPVQVIKNPADISSFRLGDVVQALVLEKLSSKEVLLAVKESE
CCCCCEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH
IAAQSALPLNVGDRLLLQVAKTHPMIVLKLIIPDDSETLEFRNNLVLFRSFPEGLFNVVK
HHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCEEEEECCHHHHHHHHH
NGLEIFQGNIQPVYQFLNQADIDAFLKILNTLIYSEKSLTSPLFLKEFIMNIGYLMEKNL
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KKSLDRTHEKGNDLKKGVDKNIKSILARLSCQLHQIMDNAMDSDLDPMLLKSLKSLSDYT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ADSLKMIYNQQVVNVFSQEEQQGYYFQLPIKFADNLRMVDLFIRLNNANKKKTGMVKQFQ
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCEEEEEEEEECCCCCHHHHHHHHEE
FVLFFNMDPLGDLIVDVRYMNKKIWGLFKCDRSESRDFLSDFIETLNERLILSGYGPNSF
EEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCE
NIQLSRDLSRERSDYLKDTVIYSKKIVNCFA
EEEECHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITSHTMEISPNVPTAFSNPVQVIKNPADISSFRLGDVVQALVLEKLSSKEVLLAVKESE
CCCCCEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH
IAAQSALPLNVGDRLLLQVAKTHPMIVLKLIIPDDSETLEFRNNLVLFRSFPEGLFNVVK
HHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCEEEEECCHHHHHHHHH
NGLEIFQGNIQPVYQFLNQADIDAFLKILNTLIYSEKSLTSPLFLKEFIMNIGYLMEKNL
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KKSLDRTHEKGNDLKKGVDKNIKSILARLSCQLHQIMDNAMDSDLDPMLLKSLKSLSDYT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ADSLKMIYNQQVVNVFSQEEQQGYYFQLPIKFADNLRMVDLFIRLNNANKKKTGMVKQFQ
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCEEEEEEEEECCCCCHHHHHHHHEE
FVLFFNMDPLGDLIVDVRYMNKKIWGLFKCDRSESRDFLSDFIETLNERLILSGYGPNSF
EEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCE
NIQLSRDLSRERSDYLKDTVIYSKKIVNCFA
EEEECHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA