| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is ylxH [H]
Identifier: 85859186
GI number: 85859186
Start: 1363890
End: 1364843
Strand: Direct
Name: ylxH [H]
Synonym: SYN_02828
Alternate gene names: 85859186
Gene position: 1363890-1364843 (Clockwise)
Preceding gene: 85859185
Following gene: 85859187
Centisome position: 42.9
GC content: 42.24
Gene sequence:
>954_bases ATGTTGAAGACAACCGACTATGCAATGAGGGGTAAAAGAGTGGATCAGGCCGAATCTCTAAGAGAACTGGTAAGGAAAAG AAACGAGACAAAATTTGGAAACCAGTCAGAAATCGAGAAAAAAAATCGCATGAAAAAAAATTATGACCGAGTCAGAACCA TTGCAATAACGAGTGGAAAAGGGGGTGTGGGAAAAACCAACATTACCGCAAATCTGGCGTGTATGTTGGCTAAAATGAAC AAAAAAACACTCGTTCTCGATGCGGACGTCGGACTGGCCAATATTGATGTCGTTCTCGGACTGACTCCGAAATACAATTT GCATCATGTTCTTACTGGAGAACGAAGATTGTCGGAAGTGATTGTAGCCGGTCCAGGTGGTGTGAAGATTTTGCCTTCCG CGTCGGGTATTCACGAAATGACGGATCTGTCGCGGGGTCAGAAATTAACCCTGCTGGATGATTTAAATTCCATAAAAGAA AGTCTCGATTTCATGCTGATTGATACCGGTGCCGGTATTGCCGGGAATGTCATGTATTTCAATATGGCAGCAAGAGAAAT CATTGTTGTTACTTCTCCGGAGCCAACGTCTCTTACTGACGCCTATGCTCTGATTAAAGTTTTGTATCAGCGATATGCAA AAAAAAGATTCCGGTTGTTAATCAATATGGTGAGAAGCGCTGCTGAAGCCAATAAAGTCTATCTTCGCCTCAGTTCAGCA ACGGATCATTTCCTGAATTTAAACATTGAGTTCATGGGTTATATCCTTCATGACAAAAAATTACAGGAAGCCGTTAAACT GCGAAAGGCCCTCGTGGAGCTTTATCCTGATTCCAAGGCAAGTCTTTGTGTAAAGAAGGTGGCTGAAAAAATATGTGAAG AAAATCCTGAGTACGATGAAAGCGGGAGCATCAGTTTCTTCGGGGAAAAAATCCTGGGTAATGAATGCAGATAA
Upstream 100 bases:
>100_bases CTCCGCAAAAAATTGCCAGGATGATTATAGGTAACGATTTGAATTGAATGTTCCGCTGACAGGGTAGTGCATCGGGAAAC GCCGGAAAAGAGCCTTTCCA
Downstream 100 bases:
>100_bases GAAAGATCGTGAAGCATTAATCTTGAAATATCTTCCCTTTGTAAAAGCTGTTGTAGGCCGCATGGCATCCAAAATACCCA TTGATGCCGGGGACAAGGAA
Product: flagellar synthesis regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MLKTTDYAMRGKRVDQAESLRELVRKRNETKFGNQSEIEKKNRMKKNYDRVRTIAITSGKGGVGKTNITANLACMLAKMN KKTLVLDADVGLANIDVVLGLTPKYNLHHVLTGERRLSEVIVAGPGGVKILPSASGIHEMTDLSRGQKLTLLDDLNSIKE SLDFMLIDTGAGIAGNVMYFNMAAREIIVVTSPEPTSLTDAYALIKVLYQRYAKKRFRLLINMVRSAAEANKVYLRLSSA TDHFLNLNIEFMGYILHDKKLQEAVKLRKALVELYPDSKASLCVKKVAEKICEENPEYDESGSISFFGEKILGNECR
Sequences:
>Translated_317_residues MLKTTDYAMRGKRVDQAESLRELVRKRNETKFGNQSEIEKKNRMKKNYDRVRTIAITSGKGGVGKTNITANLACMLAKMN KKTLVLDADVGLANIDVVLGLTPKYNLHHVLTGERRLSEVIVAGPGGVKILPSASGIHEMTDLSRGQKLTLLDDLNSIKE SLDFMLIDTGAGIAGNVMYFNMAAREIIVVTSPEPTSLTDAYALIKVLYQRYAKKRFRLLINMVRSAAEANKVYLRLSSA TDHFLNLNIEFMGYILHDKKLQEAVKLRKALVELYPDSKASLCVKKVAEKICEENPEYDESGSISFFGEKILGNECR >Mature_317_residues MLKTTDYAMRGKRVDQAESLRELVRKRNETKFGNQSEIEKKNRMKKNYDRVRTIAITSGKGGVGKTNITANLACMLAKMN KKTLVLDADVGLANIDVVLGLTPKYNLHHVLTGERRLSEVIVAGPGGVKILPSASGIHEMTDLSRGQKLTLLDDLNSIKE SLDFMLIDTGAGIAGNVMYFNMAAREIIVVTSPEPTSLTDAYALIKVLYQRYAKKRFRLLINMVRSAAEANKVYLRLSSA TDHFLNLNIEFMGYILHDKKLQEAVKLRKALVELYPDSKASLCVKKVAEKICEENPEYDESGSISFFGEKILGNECR
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=164, Percent_Identity=34.1463414634146, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 35381; Mature: 35381
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTTDYAMRGKRVDQAESLRELVRKRNETKFGNQSEIEKKNRMKKNYDRVRTIAITSGK CCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCC GGVGKTNITANLACMLAKMNKKTLVLDADVGLANIDVVLGLTPKYNLHHVLTGERRLSEV CCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEECCCHHHCEE IVAGPGGVKILPSASGIHEMTDLSRGQKLTLLDDLNSIKESLDFMLIDTGAGIAGNVMYF EEECCCCEEEECCCCCHHHHHHHCCCCEEEHHHHHHHHHHHCCEEEEECCCCCCCCEEEE NMAAREIIVVTSPEPTSLTDAYALIKVLYQRYAKKRFRLLINMVRSAAEANKVYLRLSSA EECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC TDHFLNLNIEFMGYILHDKKLQEAVKLRKALVELYPDSKASLCVKKVAEKICEENPEYDE CCEEEEEEHEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC SGSISFFGEKILGNECR CCCEEEEHHHHCCCCCC >Mature Secondary Structure MLKTTDYAMRGKRVDQAESLRELVRKRNETKFGNQSEIEKKNRMKKNYDRVRTIAITSGK CCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCC GGVGKTNITANLACMLAKMNKKTLVLDADVGLANIDVVLGLTPKYNLHHVLTGERRLSEV CCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEECCCHHHCEE IVAGPGGVKILPSASGIHEMTDLSRGQKLTLLDDLNSIKESLDFMLIDTGAGIAGNVMYF EEECCCCEEEECCCCCHHHHHHHCCCCEEEHHHHHHHHHHHCCEEEEECCCCCCCCEEEE NMAAREIIVVTSPEPTSLTDAYALIKVLYQRYAKKRFRLLINMVRSAAEANKVYLRLSSA EECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC TDHFLNLNIEFMGYILHDKKLQEAVKLRKALVELYPDSKASLCVKKVAEKICEENPEYDE CCEEEEEEHEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC SGSISFFGEKILGNECR CCCEEEEHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]