Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is ylxH [H]

Identifier: 85859186

GI number: 85859186

Start: 1363890

End: 1364843

Strand: Direct

Name: ylxH [H]

Synonym: SYN_02828

Alternate gene names: 85859186

Gene position: 1363890-1364843 (Clockwise)

Preceding gene: 85859185

Following gene: 85859187

Centisome position: 42.9

GC content: 42.24

Gene sequence:

>954_bases
ATGTTGAAGACAACCGACTATGCAATGAGGGGTAAAAGAGTGGATCAGGCCGAATCTCTAAGAGAACTGGTAAGGAAAAG
AAACGAGACAAAATTTGGAAACCAGTCAGAAATCGAGAAAAAAAATCGCATGAAAAAAAATTATGACCGAGTCAGAACCA
TTGCAATAACGAGTGGAAAAGGGGGTGTGGGAAAAACCAACATTACCGCAAATCTGGCGTGTATGTTGGCTAAAATGAAC
AAAAAAACACTCGTTCTCGATGCGGACGTCGGACTGGCCAATATTGATGTCGTTCTCGGACTGACTCCGAAATACAATTT
GCATCATGTTCTTACTGGAGAACGAAGATTGTCGGAAGTGATTGTAGCCGGTCCAGGTGGTGTGAAGATTTTGCCTTCCG
CGTCGGGTATTCACGAAATGACGGATCTGTCGCGGGGTCAGAAATTAACCCTGCTGGATGATTTAAATTCCATAAAAGAA
AGTCTCGATTTCATGCTGATTGATACCGGTGCCGGTATTGCCGGGAATGTCATGTATTTCAATATGGCAGCAAGAGAAAT
CATTGTTGTTACTTCTCCGGAGCCAACGTCTCTTACTGACGCCTATGCTCTGATTAAAGTTTTGTATCAGCGATATGCAA
AAAAAAGATTCCGGTTGTTAATCAATATGGTGAGAAGCGCTGCTGAAGCCAATAAAGTCTATCTTCGCCTCAGTTCAGCA
ACGGATCATTTCCTGAATTTAAACATTGAGTTCATGGGTTATATCCTTCATGACAAAAAATTACAGGAAGCCGTTAAACT
GCGAAAGGCCCTCGTGGAGCTTTATCCTGATTCCAAGGCAAGTCTTTGTGTAAAGAAGGTGGCTGAAAAAATATGTGAAG
AAAATCCTGAGTACGATGAAAGCGGGAGCATCAGTTTCTTCGGGGAAAAAATCCTGGGTAATGAATGCAGATAA

Upstream 100 bases:

>100_bases
CTCCGCAAAAAATTGCCAGGATGATTATAGGTAACGATTTGAATTGAATGTTCCGCTGACAGGGTAGTGCATCGGGAAAC
GCCGGAAAAGAGCCTTTCCA

Downstream 100 bases:

>100_bases
GAAAGATCGTGAAGCATTAATCTTGAAATATCTTCCCTTTGTAAAAGCTGTTGTAGGCCGCATGGCATCCAAAATACCCA
TTGATGCCGGGGACAAGGAA

Product: flagellar synthesis regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MLKTTDYAMRGKRVDQAESLRELVRKRNETKFGNQSEIEKKNRMKKNYDRVRTIAITSGKGGVGKTNITANLACMLAKMN
KKTLVLDADVGLANIDVVLGLTPKYNLHHVLTGERRLSEVIVAGPGGVKILPSASGIHEMTDLSRGQKLTLLDDLNSIKE
SLDFMLIDTGAGIAGNVMYFNMAAREIIVVTSPEPTSLTDAYALIKVLYQRYAKKRFRLLINMVRSAAEANKVYLRLSSA
TDHFLNLNIEFMGYILHDKKLQEAVKLRKALVELYPDSKASLCVKKVAEKICEENPEYDESGSISFFGEKILGNECR

Sequences:

>Translated_317_residues
MLKTTDYAMRGKRVDQAESLRELVRKRNETKFGNQSEIEKKNRMKKNYDRVRTIAITSGKGGVGKTNITANLACMLAKMN
KKTLVLDADVGLANIDVVLGLTPKYNLHHVLTGERRLSEVIVAGPGGVKILPSASGIHEMTDLSRGQKLTLLDDLNSIKE
SLDFMLIDTGAGIAGNVMYFNMAAREIIVVTSPEPTSLTDAYALIKVLYQRYAKKRFRLLINMVRSAAEANKVYLRLSSA
TDHFLNLNIEFMGYILHDKKLQEAVKLRKALVELYPDSKASLCVKKVAEKICEENPEYDESGSISFFGEKILGNECR
>Mature_317_residues
MLKTTDYAMRGKRVDQAESLRELVRKRNETKFGNQSEIEKKNRMKKNYDRVRTIAITSGKGGVGKTNITANLACMLAKMN
KKTLVLDADVGLANIDVVLGLTPKYNLHHVLTGERRLSEVIVAGPGGVKILPSASGIHEMTDLSRGQKLTLLDDLNSIKE
SLDFMLIDTGAGIAGNVMYFNMAAREIIVVTSPEPTSLTDAYALIKVLYQRYAKKRFRLLINMVRSAAEANKVYLRLSSA
TDHFLNLNIEFMGYILHDKKLQEAVKLRKALVELYPDSKASLCVKKVAEKICEENPEYDESGSISFFGEKILGNECR

Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest

COG id: COG0455

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787423, Length=164, Percent_Identity=34.1463414634146, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 35381; Mature: 35381

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTTDYAMRGKRVDQAESLRELVRKRNETKFGNQSEIEKKNRMKKNYDRVRTIAITSGK
CCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCC
GGVGKTNITANLACMLAKMNKKTLVLDADVGLANIDVVLGLTPKYNLHHVLTGERRLSEV
CCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEECCCHHHCEE
IVAGPGGVKILPSASGIHEMTDLSRGQKLTLLDDLNSIKESLDFMLIDTGAGIAGNVMYF
EEECCCCEEEECCCCCHHHHHHHCCCCEEEHHHHHHHHHHHCCEEEEECCCCCCCCEEEE
NMAAREIIVVTSPEPTSLTDAYALIKVLYQRYAKKRFRLLINMVRSAAEANKVYLRLSSA
EECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
TDHFLNLNIEFMGYILHDKKLQEAVKLRKALVELYPDSKASLCVKKVAEKICEENPEYDE
CCEEEEEEHEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
SGSISFFGEKILGNECR
CCCEEEEHHHHCCCCCC
>Mature Secondary Structure
MLKTTDYAMRGKRVDQAESLRELVRKRNETKFGNQSEIEKKNRMKKNYDRVRTIAITSGK
CCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCC
GGVGKTNITANLACMLAKMNKKTLVLDADVGLANIDVVLGLTPKYNLHHVLTGERRLSEV
CCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEECCCHHHCEE
IVAGPGGVKILPSASGIHEMTDLSRGQKLTLLDDLNSIKESLDFMLIDTGAGIAGNVMYF
EEECCCCEEEECCCCCHHHHHHHCCCCEEEHHHHHHHHHHHCCEEEEECCCCCCCCEEEE
NMAAREIIVVTSPEPTSLTDAYALIKVLYQRYAKKRFRLLINMVRSAAEANKVYLRLSSA
EECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
TDHFLNLNIEFMGYILHDKKLQEAVKLRKALVELYPDSKASLCVKKVAEKICEENPEYDE
CCEEEEEEHEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
SGSISFFGEKILGNECR
CCCEEEEHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7987014; 9384377 [H]