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The map label for this gene is flhF [H]

Identifier: 85859185

GI number: 85859185

Start: 1362664

End: 1363836

Strand: Direct

Name: flhF [H]

Synonym: SYN_02829

Alternate gene names: 85859185

Gene position: 1362664-1363836 (Clockwise)

Preceding gene: 85859184

Following gene: 85859186

Centisome position: 42.86

GC content: 41.94

Gene sequence:

>1173_bases
ATGCAGATCAAACGATATGAAGTTGCAAATGTCCAGGAGGCCGTTAAAAAAATAAAAAAGGACCTGGGTCCGGATGCAAT
TATTCTGTCGTCAAAAAAGTTGAGAGGTTCCGGGGGGGGCATGTTGGAGGTTATTGCTGCCAGAGATCTGGATTTCACAA
CCAATGCCGGCCAAAACGATCTTTCCGGCAACAATGAGTGGCGAATAGAACAAGATCGGGGAAAGAGTCTTGAAGATCTG
GCATCTTACTTAAAGAATAATTTTGAGGAATTAAAAAGACTGTTTCAAGATCTGAAGAATGAACGGTATATGCTTACCGA
GCTGGCGGAATTAAAGGATTCCATGAACACATTCTTCGATGTTCTTGGCTTGAAGCGAAACAGGACAGGGTGTGTGCAGA
CGGATCAAATTTACTATAATCTGATTTCAAAAGGCATTTCAAAAGAGAAAGCCTGGAAGGCTGTGGAAAAGGTCAAGAAT
GAATTTGCCTCCGGGCAGATTGAAAATGTACAGGCAGGTTTGTCTGTGATTGAAAGTCTGATTGGACAATCTCTTCCATT
TGTAAATCATTCCGAAAAGGAAAAAAGGGTTAAAGTTTTTATTGGTCCTACAGGCGTCGGAAAAACAACGACACTTGCAA
AACTTTCAGCTTATCATGCCCTAAGTAAAAAAAAGACCGTGGGACTCATAACGACCGACACATACCGGATTGCCGCGGTT
GAACAATTGAAAACATACGCCAGAATCATAGGTATTCCTTTGAGAGTCGCTCCCAGGAAGGATGATTTCAAACAATCCCT
GAAAAAGTTTGCTGATAAGGATGTCATCCTTGTTGACACACCGGGAAGGAGCAGCAACGACATTGTAAATTTGAAAAAGC
TCAATGAAACCCTGAGGTCGGATATTCCCTTTGAGTCGAATCTTCTCATAAGCCTTACCTCAAGTAGAGAGTCCATGATG
GAGGTGGCATTGCGCTACAGGATTTTTGATTATGATCGGATTATCCTGACCAAGGCCGATGAATCCTTACGTGTTGGTTT
CCTCTGGGATGTTCTTGATCGGATTTCCAAACCTGTTTCCTATATTACAAATGGACAAAACGTGCCTCATGACATTGAAG
AAGCAACTCCGCAAAAAATTGCCAGGATGATTATAGGTAACGATTTGAATTGA

Upstream 100 bases:

>100_bases
AATATCATGGAGAAATTCTTTCCCAGCGTCGTAGTCCTTTCTCATAATGAGGTTACGCGGGAAACATCCATCAAATCCTT
AGGCATGGTAGAGCTGTAAT

Downstream 100 bases:

>100_bases
ATGTTCCGCTGACAGGGTAGTGCATCGGGAAACGCCGGAAAAGAGCCTTTCCAATGTTGAAGACAACCGACTATGCAATG
AGGGGTAAAAGAGTGGATCA

Product: flagellar biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MQIKRYEVANVQEAVKKIKKDLGPDAIILSSKKLRGSGGGMLEVIAARDLDFTTNAGQNDLSGNNEWRIEQDRGKSLEDL
ASYLKNNFEELKRLFQDLKNERYMLTELAELKDSMNTFFDVLGLKRNRTGCVQTDQIYYNLISKGISKEKAWKAVEKVKN
EFASGQIENVQAGLSVIESLIGQSLPFVNHSEKEKRVKVFIGPTGVGKTTTLAKLSAYHALSKKKTVGLITTDTYRIAAV
EQLKTYARIIGIPLRVAPRKDDFKQSLKKFADKDVILVDTPGRSSNDIVNLKKLNETLRSDIPFESNLLISLTSSRESMM
EVALRYRIFDYDRIILTKADESLRVGFLWDVLDRISKPVSYITNGQNVPHDIEEATPQKIARMIIGNDLN

Sequences:

>Translated_390_residues
MQIKRYEVANVQEAVKKIKKDLGPDAIILSSKKLRGSGGGMLEVIAARDLDFTTNAGQNDLSGNNEWRIEQDRGKSLEDL
ASYLKNNFEELKRLFQDLKNERYMLTELAELKDSMNTFFDVLGLKRNRTGCVQTDQIYYNLISKGISKEKAWKAVEKVKN
EFASGQIENVQAGLSVIESLIGQSLPFVNHSEKEKRVKVFIGPTGVGKTTTLAKLSAYHALSKKKTVGLITTDTYRIAAV
EQLKTYARIIGIPLRVAPRKDDFKQSLKKFADKDVILVDTPGRSSNDIVNLKKLNETLRSDIPFESNLLISLTSSRESMM
EVALRYRIFDYDRIILTKADESLRVGFLWDVLDRISKPVSYITNGQNVPHDIEEATPQKIARMIIGNDLN
>Mature_390_residues
MQIKRYEVANVQEAVKKIKKDLGPDAIILSSKKLRGSGGGMLEVIAARDLDFTTNAGQNDLSGNNEWRIEQDRGKSLEDL
ASYLKNNFEELKRLFQDLKNERYMLTELAELKDSMNTFFDVLGLKRNRTGCVQTDQIYYNLISKGISKEKAWKAVEKVKN
EFASGQIENVQAGLSVIESLIGQSLPFVNHSEKEKRVKVFIGPTGVGKTTTLAKLSAYHALSKKKTVGLITTDTYRIAAV
EQLKTYARIIGIPLRVAPRKDDFKQSLKKFADKDVILVDTPGRSSNDIVNLKKLNETLRSDIPFESNLLISLTSSRESMM
EVALRYRIFDYDRIILTKADESLRVGFLWDVLDRISKPVSYITNGQNVPHDIEEATPQKIARMIIGNDLN

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1788963, Length=271, Percent_Identity=24.7232472324723, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1789874, Length=184, Percent_Identity=29.3478260869565, Blast_Score=72, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6325345, Length=194, Percent_Identity=27.319587628866, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 44011; Mature: 44011

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKRYEVANVQEAVKKIKKDLGPDAIILSSKKLRGSGGGMLEVIAARDLDFTTNAGQND
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCC
LSGNNEWRIEQDRGKSLEDLASYLKNNFEELKRLFQDLKNERYMLTELAELKDSMNTFFD
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLGLKRNRTGCVQTDQIYYNLISKGISKEKAWKAVEKVKNEFASGQIENVQAGLSVIESL
HHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IGQSLPFVNHSEKEKRVKVFIGPTGVGKTTTLAKLSAYHALSKKKTVGLITTDTYRIAAV
HHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHH
EQLKTYARIIGIPLRVAPRKDDFKQSLKKFADKDVILVDTPGRSSNDIVNLKKLNETLRS
HHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHH
DIPFESNLLISLTSSRESMMEVALRYRIFDYDRIILTKADESLRVGFLWDVLDRISKPVS
CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHH
YITNGQNVPHDIEEATPQKIARMIIGNDLN
HHCCCCCCCCHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MQIKRYEVANVQEAVKKIKKDLGPDAIILSSKKLRGSGGGMLEVIAARDLDFTTNAGQND
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCC
LSGNNEWRIEQDRGKSLEDLASYLKNNFEELKRLFQDLKNERYMLTELAELKDSMNTFFD
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLGLKRNRTGCVQTDQIYYNLISKGISKEKAWKAVEKVKNEFASGQIENVQAGLSVIESL
HHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IGQSLPFVNHSEKEKRVKVFIGPTGVGKTTTLAKLSAYHALSKKKTVGLITTDTYRIAAV
HHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHH
EQLKTYARIIGIPLRVAPRKDDFKQSLKKFADKDVILVDTPGRSSNDIVNLKKLNETLRS
HHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHH
DIPFESNLLISLTSSRESMMEVALRYRIFDYDRIILTKADESLRVGFLWDVLDRISKPVS
CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHH
YITNGQNVPHDIEEATPQKIARMIIGNDLN
HHCCCCCCCCHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1447978; 9384377 [H]