Click here to switch to the map view.

The map label for this gene is yqjF [H]

Identifier: 85375127

GI number: 85375127

Start: 2324696

End: 2325163

Strand: Direct

Name: yqjF [H]

Synonym: ELI_11500

Alternate gene names: 85375127

Gene position: 2324696-2325163 (Clockwise)

Preceding gene: 85375126

Following gene: 85375129

Centisome position: 76.16

GC content: 63.68

Gene sequence:

>468_bases
ATGGCCATGATCGCATCGATTGCAGGCCGCCTGATGCTGGCGCTGCTGTTCATCCTCGCGGGATTGAACAAGATCATGAA
TCCGGCAGACACTGCCGCCTATATCGAGGCGCAGACGGCACTTCCGCCGTCGCTGGCGTTGCCAACCGGGATTTTCGAAC
TGGTGGCCGGGCTGTTTCTTGCAGCAGGTTTCATGACGCGGCTGAGCGCCTTCGTGCTGGCGGTCTTCACCCTGTTGACG
ATCCCGCTGTTCCACGCGCAGGTCAGCGATCCGACGCAGATGACGATGGCCCTGAAGAACCTCGCCATCGCCGGCGGGCT
ATTGATAGTCGTGGCCTATGGCCAGGCACGCGGTTCGGTCGACAAATGGCGCGAGCGTGACCGGGCGCGGAAGGCCGAAA
TCAAGGCCGCCCACGCCGAAGGCCGTGCCAAGGGGGCGGAAACCGCCGCCACGGCACGACACGACTAG

Upstream 100 bases:

>100_bases
GAAACTGGTTGAAAGGCTTGAGGAAAACGCGGAGATTGCCTTCGCGGTCGAGAGCTGACCGCGCGCGCTACCGGCGCGCG
TTATTTGGGGAGAGACCATA

Downstream 100 bases:

>100_bases
AACGCGACGGGGAGCGCGCGCTCAGAAGCTGAAGCGCACGCTGCCCTTGATGTTGCGCCCTGCGAGCGGGACGAAGTCCT
TGGTGAAGCTGGCGTGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MAMIASIAGRLMLALLFILAGLNKIMNPADTAAYIEAQTALPPSLALPTGIFELVAGLFLAAGFMTRLSAFVLAVFTLLT
IPLFHAQVSDPTQMTMALKNLAIAGGLLIVVAYGQARGSVDKWRERDRARKAEIKAAHAEGRAKGAETAATARHD

Sequences:

>Translated_155_residues
MAMIASIAGRLMLALLFILAGLNKIMNPADTAAYIEAQTALPPSLALPTGIFELVAGLFLAAGFMTRLSAFVLAVFTLLT
IPLFHAQVSDPTQMTMALKNLAIAGGLLIVVAYGQARGSVDKWRERDRARKAEIKAAHAEGRAKGAETAATARHD
>Mature_154_residues
AMIASIAGRLMLALLFILAGLNKIMNPADTAAYIEAQTALPPSLALPTGIFELVAGLFLAAGFMTRLSAFVLAVFTLLTI
PLFHAQVSDPTQMTMALKNLAIAGGLLIVVAYGQARGSVDKWRERDRARKAEIKAAHAEGRAKGAETAATARHD

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=120, Percent_Identity=37.5, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 16404; Mature: 16272

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMIASIAGRLMLALLFILAGLNKIMNPADTAAYIEAQTALPPSLALPTGIFELVAGLFL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AAGFMTRLSAFVLAVFTLLTIPLFHAQVSDPTQMTMALKNLAIAGGLLIVVAYGQARGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCH
DKWRERDRARKAEIKAAHAEGRAKGAETAATARHD
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
>Mature Secondary Structure 
AMIASIAGRLMLALLFILAGLNKIMNPADTAAYIEAQTALPPSLALPTGIFELVAGLFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AAGFMTRLSAFVLAVFTLLTIPLFHAQVSDPTQMTMALKNLAIAGGLLIVVAYGQARGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCH
DKWRERDRARKAEIKAAHAEGRAKGAETAATARHD
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]