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The map label for this gene is crtB [H]

Identifier: 85374806

GI number: 85374806

Start: 2009246

End: 2010331

Strand: Direct

Name: crtB [H]

Synonym: ELI_09895

Alternate gene names: 85374806

Gene position: 2009246-2010331 (Clockwise)

Preceding gene: 85374805

Following gene: 85374807

Centisome position: 65.83

GC content: 67.77

Gene sequence:

>1086_bases
TTGAGCGAGCCGGGCAAACCCATAAAGGTGCCGCAACGCCCCCTCGCGCCCTCGCGCATCCTGCGGCCGACGGTGTCGCG
CGCGGGTGGCGGGCGCGACCGGGCGTCGCTGGTGGCCAAGAGCTACGAGATGATCGCCGAAGGGTCGAAGAGCTTCGCCA
GCGCCAGCAAGCTGTTCGACCGCGGCACGCGCGAACGGGTGTGGCTGCTCTATGCCTGGTGCCGCCGCTGCGACGACATC
GCCGACGGACAGGATCTGGGCGGCGAACTGGGGGATCAATCCGACATCGCTGACCGCGTCAAGGCGATCCGCGTTCTGAC
AAAGCGCGCGCTCGAAGGCCAGCCGACCGCCGATATCGCCTTTGACGCCTTCGGGCAGGTCGCCGCCGAGTGCAATCTGA
CGATGGAAATGGCCAACGACGTGATTGCCGGATTCGAACTCGACGCGCGTGGCTGGCGTCCGCGCACGGGGCGGGACCTC
GCGCGTTACTGCTACCACGTCGCCGGCGCGGTCGGGGTGATGATGGCGCGGATCATGGGCGTGCGACCGGAAGACGAATA
CACGCTGGCGCGCGCCTGCGACCTCGGCCTCGCCTTCCAGCTTGCCAACATCGCGCGCGACATGGACGAAGACGATGCGG
CGGGCCGCTGCTATATTCCGGAGGAATGGCTGGCGGAGCAGGATATCGAGCCCGGCCAGTTGATGAAGCCGCACCACCGC
GGCGAAGCCGCAGATATCGCGCGCGACCTCGTCCTGCGGATGCACCGGCACCAGCGCGCGGCGCGGCTCGGCACCGTCCG
GCTCCCGTTTCGCAGCCGCTGGGCGATCCTGGCCGCGGCCAACATCTACAGCGAGATCGGCTACGAGGTGGACCGGCGCG
GCAAGCAGGCGTGGGACCGCCGCGTGGTGATCCCGCGGATCAAGAAACTGCAGCTGATAACGCGCGCCTTTGCCGAAGCG
CTCCGCAACAAGCCGCTGCCGCCCGACGAAATGCCGGAATGGGAACTCGGCGACATCCTGATCGACGTCCGCATGCTCGG
CGACATTCCGGAACAGGAAATCAAGCCGCTGCCGGACGAGGAATAG

Upstream 100 bases:

>100_bases
AGAACATCCTGATTCATGCGGAGACGCTGCCGGACCTCTTGGCGAAGATGGTCAATTACAAACCGCACACGCCGATTTTC
CGCATGAAGGCCGACGATCT

Downstream 100 bases:

>100_bases
CGGGCCGCCATAGCGACTTGCCGTAAGCGCATGGCTGGCCTAGCCGTGCTGCCATGATTTCCAAGCTCCTCATCGCCAAC
AGAGGCGAGATCGCCTGCCG

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MSEPGKPIKVPQRPLAPSRILRPTVSRAGGGRDRASLVAKSYEMIAEGSKSFASASKLFDRGTRERVWLLYAWCRRCDDI
ADGQDLGGELGDQSDIADRVKAIRVLTKRALEGQPTADIAFDAFGQVAAECNLTMEMANDVIAGFELDARGWRPRTGRDL
ARYCYHVAGAVGVMMARIMGVRPEDEYTLARACDLGLAFQLANIARDMDEDDAAGRCYIPEEWLAEQDIEPGQLMKPHHR
GEAADIARDLVLRMHRHQRAARLGTVRLPFRSRWAILAAANIYSEIGYEVDRRGKQAWDRRVVIPRIKKLQLITRAFAEA
LRNKPLPPDEMPEWELGDILIDVRMLGDIPEQEIKPLPDEE

Sequences:

>Translated_361_residues
MSEPGKPIKVPQRPLAPSRILRPTVSRAGGGRDRASLVAKSYEMIAEGSKSFASASKLFDRGTRERVWLLYAWCRRCDDI
ADGQDLGGELGDQSDIADRVKAIRVLTKRALEGQPTADIAFDAFGQVAAECNLTMEMANDVIAGFELDARGWRPRTGRDL
ARYCYHVAGAVGVMMARIMGVRPEDEYTLARACDLGLAFQLANIARDMDEDDAAGRCYIPEEWLAEQDIEPGQLMKPHHR
GEAADIARDLVLRMHRHQRAARLGTVRLPFRSRWAILAAANIYSEIGYEVDRRGKQAWDRRVVIPRIKKLQLITRAFAEA
LRNKPLPPDEMPEWELGDILIDVRMLGDIPEQEIKPLPDEE
>Mature_360_residues
SEPGKPIKVPQRPLAPSRILRPTVSRAGGGRDRASLVAKSYEMIAEGSKSFASASKLFDRGTRERVWLLYAWCRRCDDIA
DGQDLGGELGDQSDIADRVKAIRVLTKRALEGQPTADIAFDAFGQVAAECNLTMEMANDVIAGFELDARGWRPRTGRDLA
RYCYHVAGAVGVMMARIMGVRPEDEYTLARACDLGLAFQLANIARDMDEDDAAGRCYIPEEWLAEQDIEPGQLMKPHHRG
EAADIARDLVLRMHRHQRAARLGTVRLPFRSRWAILAAANIYSEIGYEVDRRGKQAWDRRVVIPRIKKLQLITRAFAEAL
RNKPLPPDEMPEWELGDILIDVRMLGDIPEQEIKPLPDEE

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 40542; Mature: 40411

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPGKPIKVPQRPLAPSRILRPTVSRAGGGRDRASLVAKSYEMIAEGSKSFASASKLFD
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RGTRERVWLLYAWCRRCDDIADGQDLGGELGDQSDIADRVKAIRVLTKRALEGQPTADIA
CCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FDAFGQVAAECNLTMEMANDVIAGFELDARGWRPRTGRDLARYCYHVAGAVGVMMARIMG
HHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
VRPEDEYTLARACDLGLAFQLANIARDMDEDDAAGRCYIPEEWLAEQDIEPGQLMKPHHR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
GEAADIARDLVLRMHRHQRAARLGTVRLPFRSRWAILAAANIYSEIGYEVDRRGKQAWDR
CCHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
RVVIPRIKKLQLITRAFAEALRNKPLPPDEMPEWELGDILIDVRMLGDIPEQEIKPLPDE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCC
E
C
>Mature Secondary Structure 
SEPGKPIKVPQRPLAPSRILRPTVSRAGGGRDRASLVAKSYEMIAEGSKSFASASKLFD
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RGTRERVWLLYAWCRRCDDIADGQDLGGELGDQSDIADRVKAIRVLTKRALEGQPTADIA
CCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FDAFGQVAAECNLTMEMANDVIAGFELDARGWRPRTGRDLARYCYHVAGAVGVMMARIMG
HHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
VRPEDEYTLARACDLGLAFQLANIARDMDEDDAAGRCYIPEEWLAEQDIEPGQLMKPHHR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
GEAADIARDLVLRMHRHQRAARLGTVRLPFRSRWAILAAANIYSEIGYEVDRRGKQAWDR
CCHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
RVVIPRIKKLQLITRAFAEALRNKPLPPDEMPEWELGDILIDVRMLGDIPEQEIKPLPDE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2254247 [H]